EnhancerDB
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  3. vista28620[chr19:11253262-11253482]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28620[chr19:11253262-11253482]
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Tissue distribution of vista28620
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Transcription factor that possibly regulate vista28620[chr19:11253262-11253482]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 11252571 11254390 POLR2A UCSC Txn Factor no Conserved 107690074
chr19 11252571 11254390 POLR2A UCSC Txn Factor no Conserved 108384629
chr19 11252571 11254390 POLR2A UCSC Txn Factor no Conserved 108384630
chr19 11252595 11253268 CTCF UCSC Txn Factor no Conserved 107690075
chr19 11252595 11253268 CTCF UCSC Txn Factor no Conserved 108384631
chr19 11253245 11253570 JUND UCSC Txn Factor no Conserved 107690103
chr19 11253245 11253570 JUND UCSC Txn Factor no Conserved 108384660
chr19 11253292 11253530 FOSL2 UCSC Txn Factor no Conserved 107690119
chr19 11253292 11253530 FOSL2 UCSC Txn Factor no Conserved 108384676
chr19 11253269 11253281 TFAP2A JASPAR yes 70804030
chr19 11253269 11253281 TFAP2B JASPAR yes 70804031
chr19 11253269 11253281 TFAP2C JASPAR yes 70804032
chr19 11253269 11253281 TFAP2A JASPAR yes 108571593
chr19 11253269 11253281 TFAP2B JASPAR yes 108571594
chr19 11253269 11253281 TFAP2C JASPAR yes 108571595
chr19 11253269 11253281 TFAP2A JASPAR yes 112457949
chr19 11253269 11253281 TFAP2B JASPAR yes 112457950
chr19 11253269 11253281 TFAP2C JASPAR yes 112457951
chr19 11253290 11253311 ZNF263 JASPAR yes 70804033
chr19 11253290 11253311 ZNF263 JASPAR yes 108571596
chr19 11253290 11253311 ZNF263 JASPAR yes 112457952
chr19 11253303 11253318 NR2C2 JASPAR yes 70804034
chr19 11253303 11253318 NR2C2 JASPAR yes 108571597
chr19 11253303 11253318 NR2C2 JASPAR yes 112457953
chr19 11253304 11253311 SP1 TRANSFAC yes 70804035
chr19 11253304 11253311 SP1 TRANSFAC yes 108571598
chr19 11253304 11253311 SP1 TRANSFAC yes 112457954
chr19 11253304 11253314 SP1 JASPAR yes 70804036
chr19 11253304 11253314 SP1 JASPAR yes 108571599
chr19 11253304 11253314 SP1 JASPAR yes 112457955
chr19 11253304 11253325 ZNF263 JASPAR yes 70804037
chr19 11253304 11253325 ZNF263 JASPAR yes 108571600
chr19 11253304 11253325 ZNF263 JASPAR yes 112457956
chr19 11253305 11253313 SP1 TRANSFAC yes 70804038
chr19 11253305 11253313 SP1 TRANSFAC yes 108571601
chr19 11253305 11253313 SP1 TRANSFAC yes 112457957
chr19 11253305 11253325 RREB1 JASPAR yes 70804039
chr19 11253305 11253325 RREB1 JASPAR yes 108571602
chr19 11253305 11253325 RREB1 JASPAR yes 112457958
chr19 11253306 11253311 SP1 TRANSFAC yes 70804040
chr19 11253306 11253311 SP1 TRANSFAC yes 108571603
chr19 11253306 11253311 SP1 TRANSFAC yes 112457959
chr19 11253306 11253326 RREB1 JASPAR yes 70804041
chr19 11253306 11253326 RREB1 JASPAR yes 108571604
chr19 11253306 11253326 RREB1 JASPAR yes 112457960
chr19 11253307 11253312 SP1 TRANSFAC yes 70804042
chr19 11253307 11253312 SP1 TRANSFAC yes 108571605
chr19 11253307 11253312 SP1 TRANSFAC yes 112457961
chr19 11253307 11253313 SP1 TRANSFAC yes 70804043
chr19 11253307 11253313 SP1 TRANSFAC yes 108571606
chr19 11253307 11253313 SP1 TRANSFAC yes 112457962
chr19 11253310 11253330 RREB1 JASPAR yes 70804044
chr19 11253310 11253330 RREB1 JASPAR yes 108571607
chr19 11253310 11253330 RREB1 JASPAR yes 112457963
chr19 11253313 11253318 SP1 TRANSFAC yes 70804045
chr19 11253313 11253318 SP1 TRANSFAC yes 108571608
chr19 11253313 11253318 SP1 TRANSFAC yes 112457964
chr19 11253314 11253324 SP1 JASPAR yes 70804046
chr19 11253314 11253324 SP1 JASPAR yes 108571609
chr19 11253314 11253324 SP1 JASPAR yes 112457965
chr19 11253316 11253328 INSM1 JASPAR yes 70804047
chr19 11253316 11253328 INSM1 JASPAR yes 108571610
chr19 11253316 11253328 INSM1 JASPAR yes 112457966
chr19 11253321 11253328 SP1 TRANSFAC yes 70804048
chr19 11253321 11253328 SP1 TRANSFAC yes 108571611
chr19 11253321 11253328 SP1 TRANSFAC yes 112457967
chr19 11253321 11253331 SP1 JASPAR yes 70804049
chr19 11253321 11253331 SP1 JASPAR yes 108571612
chr19 11253321 11253331 SP1 JASPAR yes 112457968
chr19 11253322 11253330 SP1 TRANSFAC yes 70804050
chr19 11253322 11253330 SP1 TRANSFAC yes 108571613
chr19 11253322 11253330 SP1 TRANSFAC yes 112457969
chr19 11253322 11253331 SP1 TRANSFAC yes 70804051
chr19 11253322 11253331 SP1 TRANSFAC yes 108571614
chr19 11253322 11253331 SP1 TRANSFAC yes 112457970
chr19 11253323 11253328 SP1 TRANSFAC yes 70804052
chr19 11253323 11253328 SP1 TRANSFAC yes 108571615
chr19 11253323 11253328 SP1 TRANSFAC yes 112457971
chr19 11253324 11253329 SP1 TRANSFAC yes 70804053
chr19 11253324 11253329 SP1 TRANSFAC yes 108571616
chr19 11253324 11253329 SP1 TRANSFAC yes 112457972
chr19 11253324 11253330 SP1 TRANSFAC yes 70804054
chr19 11253324 11253330 SP1 TRANSFAC yes 108571617
chr19 11253324 11253330 SP1 TRANSFAC yes 112457973
chr19 11253327 11253332 SP1 TRANSFAC yes 70804055
chr19 11253327 11253332 SP1 TRANSFAC yes 108571618
chr19 11253327 11253332 SP1 TRANSFAC yes 112457974
chr19 11253327 11253334 SP1 TRANSFAC yes 70804056
chr19 11253327 11253334 SP1 TRANSFAC yes 108571619
chr19 11253327 11253334 SP1 TRANSFAC yes 112457975
chr19 11253340 11253355 TFAP2C JASPAR yes 70804057
chr19 11253340 11253355 TFAP2C JASPAR yes 108571620
chr19 11253340 11253355 TFAP2C JASPAR yes 112457976
chr19 11253342 11253357 TFAP2A JASPAR yes 70804058
chr19 11253342 11253357 TFAP2C JASPAR yes 70804059
chr19 11253342 11253357 TFAP2A JASPAR yes 108571621
chr19 11253342 11253357 TFAP2C JASPAR yes 108571622
chr19 11253342 11253357 TFAP2A JASPAR yes 112457977
chr19 11253342 11253357 TFAP2C JASPAR yes 112457978
chr19 11253343 11253354 TFAP2A JASPAR yes 70804060
chr19 11253343 11253354 TFAP2B JASPAR yes 70804061
chr19 11253343 11253354 TFAP2C JASPAR yes 70804062
chr19 11253343 11253354 TFAP2A JASPAR yes 108571623
chr19 11253343 11253354 TFAP2B JASPAR yes 108571624
chr19 11253343 11253354 TFAP2C JASPAR yes 108571625
chr19 11253343 11253354 TFAP2A JASPAR yes 112457979
chr19 11253343 11253354 TFAP2B JASPAR yes 112457980
chr19 11253343 11253354 TFAP2C JASPAR yes 112457981
chr19 11253352 11253356 NFE TRANSFAC yes 70804063
chr19 11253352 11253356 NFE TRANSFAC yes 108571626
chr19 11253352 11253356 NFE TRANSFAC yes 112457982
chr19 11253356 11253365 HIC2 JASPAR yes 70804064
chr19 11253356 11253365 HIC2 JASPAR yes 108571627
chr19 11253356 11253365 HIC2 JASPAR yes 112457983
chr19 11253358 11253372 TLX1 JASPAR yes 70804065
chr19 11253358 11253372 TLX1 JASPAR yes 108571628
chr19 11253358 11253372 TLX1 JASPAR yes 112457984
chr19 11253359 11253363 LFA1 TRANSFAC yes 70804066
chr19 11253359 11253363 LFA1 TRANSFAC yes 108571629
chr19 11253359 11253363 LFA1 TRANSFAC yes 112457985
chr19 11253377 11253381 LFA1 TRANSFAC yes 70804067
chr19 11253377 11253381 LFA1 TRANSFAC yes 108571630
chr19 11253377 11253381 LFA1 TRANSFAC yes 112457986
chr19 11253377 11253391 JUN JASPAR yes 70804068
chr19 11253377 11253391 JUN JASPAR yes 108571631
chr19 11253377 11253391 JUN JASPAR yes 112457987
chr19 11253380 11253391 FOSL2 JASPAR yes 70804069
chr19 11253380 11253391 JUNB JASPAR yes 70804070
chr19 11253380 11253391 FOSL2 JASPAR yes 108571632
chr19 11253380 11253391 JUNB JASPAR yes 108571633
chr19 11253380 11253391 FOSL2 JASPAR yes 112457988
chr19 11253380 11253391 JUNB JASPAR yes 112457989
chr19 11253381 11253392 FOS JASPAR yes 70804071
chr19 11253381 11253392 FOSL1 JASPAR yes 70804072
chr19 11253381 11253392 JUND JASPAR yes 70804073
chr19 11253381 11253392 FOS JASPAR yes 108571634
chr19 11253381 11253392 FOSL1 JASPAR yes 108571635
chr19 11253381 11253392 JUND JASPAR yes 108571636
chr19 11253381 11253392 FOS JASPAR yes 112457990
chr19 11253381 11253392 FOSL1 JASPAR yes 112457991
chr19 11253381 11253392 JUND JASPAR yes 112457992
chr19 11253383 11253390 JUN TRANSFAC yes 70804074
chr19 11253383 11253390 JUN TRANSFAC yes 108571637
chr19 11253383 11253390 JUN TRANSFAC yes 112457993
chr19 11253385 11253397 INSM1 JASPAR yes 70804075
chr19 11253385 11253397 INSM1 JASPAR yes 108571638
chr19 11253385 11253397 INSM1 JASPAR yes 112457994
chr19 11253390 11253395 SP1 TRANSFAC yes 70804076
chr19 11253390 11253395 SP1 TRANSFAC yes 108571639
chr19 11253390 11253395 SP1 TRANSFAC yes 112457995
chr19 11253409 11253414 SP1 TRANSFAC yes 70804077
chr19 11253409 11253414 SP1 TRANSFAC yes 108571640
chr19 11253409 11253414 SP1 TRANSFAC yes 112457996
chr19 11253417 11253427 SP1 JASPAR yes 70804078
chr19 11253417 11253427 SP1 JASPAR yes 108571641
chr19 11253417 11253427 SP1 JASPAR yes 112457997
chr19 11253418 11253426 SP1 TRANSFAC yes 70804079
chr19 11253418 11253426 SP1 TRANSFAC yes 108571642
chr19 11253418 11253426 SP1 TRANSFAC yes 112457998
chr19 11253437 11253452 STAT1 JASPAR yes 70804080
chr19 11253437 11253452 STAT1 JASPAR yes 108571643
chr19 11253437 11253452 STAT1 JASPAR yes 112457999
chr19 11253448 11253463 ZIC4 JASPAR yes 70804081
chr19 11253448 11253463 ZIC4 JASPAR yes 108571644
chr19 11253448 11253463 ZIC4 JASPAR yes 112458000
chr19 11253478 11253485 SPIB JASPAR yes 70804082
chr19 11253478 11253485 SPIB JASPAR yes 108571645
chr19 11253478 11253485 SPIB JASPAR yes 112458001
chr19 11253479 11253500 ZNF263 JASPAR yes 70804083
chr19 11253479 11253500 ZNF263 JASPAR yes 108571646
chr19 11253479 11253500 ZNF263 JASPAR yes 112458002
chr19 11253481 11253502 ZNF263 JASPAR yes 70804084
chr19 11253481 11253502 ZNF263 JASPAR yes 108571647
chr19 11253481 11253502 ZNF263 JASPAR yes 112458003
SNP sites on vista28620[chr19:11253262-11253482]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 11253305 rs114605659 G A
FOSL2 JUND NR2C2 POLR2A RREB1 SP1 ZNF263
5441438
chr19 11253310 rs7259455 C G,T
FOSL2 JUND NR2C2 POLR2A RREB1 SP1 ZNF263
5441439
chr19 11253315 rs570651837 G A
FOSL2 JUND NR2C2 POLR2A RREB1 SP1 ZNF263
5441440
chr19 11253334 rs184840784 G A
FOSL2 JUND POLR2A SP1
5441441
chr19 11253431 rs189692922 G T
FOSL2 JUND POLR2A
5441442
chr19 11253446 rs552857312 G A
FOSL2 JUND POLR2A STAT1
5441443
chr19 11253462 rs528175292 GC G
FOSL2 JUND POLR2A ZIC4
5441444
chr19 11253474 rs535139716 C G
FOSL2 JUND POLR2A
5441445
Genes possibly regulated by vista28620[chr19:11253262-11253482]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 11200038 11244492 + LDLR ENSG00000130164.7 11200038 0.9 1.0 17029 46776
chr19 11242196 11266484 - SPC24 ENSG00000161888.7 11266484 0.92 1.0 17030 86998
chr19 11274943 11308467 - KANK2 ENSG00000197256.6 11308467 0.85 0.99 17031 45015
chr19 11348178 11352619 + C19orf80 ENSG00000130173.9 11348178 1.0 1.0 17033 5304
Expression level of Genes
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miRNAs possibly regulated by vista28620[chr19:11253262-11253482]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results