EnhancerDB
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  3. vista28621[chr19:11253991-11254271]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28621[chr19:11253991-11254271]
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Tissue distribution of vista28621
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Transcription factor that possibly regulate vista28621[chr19:11253991-11254271]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 11252571 11254390 POLR2A UCSC Txn Factor no Conserved 107690074
chr19 11252571 11254390 POLR2A UCSC Txn Factor no Conserved 108384629
chr19 11252571 11254390 POLR2A UCSC Txn Factor no Conserved 108384630
chr19 11253718 11254337 E2F1 UCSC Txn Factor no Conserved 107690136
chr19 11253718 11254337 E2F1 UCSC Txn Factor no Conserved 108384695
chr19 11253979 11254243 TFAP2C UCSC Txn Factor no Conserved 107690172
chr19 11253979 11254243 TFAP2C UCSC Txn Factor no Conserved 108384731
chr19 11253991 11254188 TFAP2A UCSC Txn Factor no Conserved 107690174
chr19 11253991 11254188 TFAP2A UCSC Txn Factor no Conserved 108384733
chr19 11253974 11253992 NR3C1 JASPAR yes 70804085
chr19 11253974 11253992 NR3C1 JASPAR yes 108571720
chr19 11253974 11253992 NR3C1 JASPAR yes 112458076
chr19 11253990 11254002 E2F8 JASPAR yes 70804086
chr19 11253990 11254002 E2F8 JASPAR yes 108571722
chr19 11253990 11254002 E2F8 JASPAR yes 112458078
chr19 11253994 11254002 E2F1 JASPAR yes 70804087
chr19 11253994 11254002 E2F1 JASPAR yes 108571723
chr19 11253994 11254002 E2F1 JASPAR yes 112458079
chr19 11254000 11254005 ETS2 TRANSFAC yes 70804088
chr19 11254000 11254005 ETS2 TRANSFAC yes 108571724
chr19 11254000 11254005 ETS2 TRANSFAC yes 112458080
chr19 11254002 11254012 REL JASPAR yes 70804089
chr19 11254002 11254012 REL JASPAR yes 108571725
chr19 11254002 11254012 REL JASPAR yes 112458081
chr19 11254012 11254023 ESRRA JASPAR yes 70804090
chr19 11254012 11254023 ESRRA JASPAR yes 108571726
chr19 11254012 11254023 ESRRA JASPAR yes 112458082
chr19 11254017 11254025 MEIS2 JASPAR yes 70804091
chr19 11254017 11254025 MEIS3 JASPAR yes 70804092
chr19 11254017 11254025 MEIS2 JASPAR yes 108571727
chr19 11254017 11254025 MEIS3 JASPAR yes 108571728
chr19 11254017 11254025 MEIS2 JASPAR yes 112458083
chr19 11254017 11254025 MEIS3 JASPAR yes 112458084
chr19 11254047 11254055 TBX15 JASPAR yes 70804093
chr19 11254047 11254055 TBX1 JASPAR yes 70804094
chr19 11254047 11254055 TBX4 JASPAR yes 70804095
chr19 11254047 11254055 TBX5 JASPAR yes 70804096
chr19 11254047 11254055 TBX15 JASPAR yes 108571729
chr19 11254047 11254055 TBX1 JASPAR yes 108571730
chr19 11254047 11254055 TBX4 JASPAR yes 108571731
chr19 11254047 11254055 TBX5 JASPAR yes 108571732
chr19 11254047 11254055 TBX15 JASPAR yes 112458085
chr19 11254047 11254055 TBX1 JASPAR yes 112458086
chr19 11254047 11254055 TBX4 JASPAR yes 112458087
chr19 11254047 11254055 TBX5 JASPAR yes 112458088
chr19 11254047 11254059 PKNOX1 JASPAR yes 70804097
chr19 11254047 11254059 PKNOX2 JASPAR yes 70804098
chr19 11254047 11254059 TGIF2 JASPAR yes 70804099
chr19 11254047 11254059 PKNOX1 JASPAR yes 108571733
chr19 11254047 11254059 PKNOX2 JASPAR yes 108571734
chr19 11254047 11254059 TGIF2 JASPAR yes 108571735
chr19 11254047 11254059 PKNOX1 JASPAR yes 112458089
chr19 11254047 11254059 PKNOX2 JASPAR yes 112458090
chr19 11254047 11254059 TGIF2 JASPAR yes 112458091
chr19 11254048 11254058 ID4 JASPAR yes 70804100
chr19 11254048 11254058 SREBF2 JASPAR yes 70804101
chr19 11254048 11254058 ID4 JASPAR yes 108571736
chr19 11254048 11254058 SREBF2 JASPAR yes 108571737
chr19 11254048 11254058 ID4 JASPAR yes 112458092
chr19 11254048 11254058 SREBF2 JASPAR yes 112458093
chr19 11254049 11254058 SNAI2 JASPAR yes 70804102
chr19 11254049 11254058 SNAI2 JASPAR yes 108571738
chr19 11254049 11254058 SNAI2 JASPAR yes 112458094
chr19 11254050 11254055 USF2 TRANSFAC yes 70804103
chr19 11254050 11254055 USF2 TRANSFAC yes 108571739
chr19 11254050 11254055 USF2 TRANSFAC yes 112458095
chr19 11254070 11254085 TFAP2A JASPAR yes 70804104
chr19 11254070 11254085 TFAP2C JASPAR yes 70804105
chr19 11254070 11254085 TFAP2A JASPAR yes 108571740
chr19 11254070 11254085 TFAP2C JASPAR yes 108571741
chr19 11254070 11254085 TFAP2A JASPAR yes 112458096
chr19 11254070 11254085 TFAP2C JASPAR yes 112458097
chr19 11254072 11254087 TFAP2C JASPAR yes 70804106
chr19 11254072 11254087 TFAP2C JASPAR yes 108571742
chr19 11254072 11254087 TFAP2C JASPAR yes 112458098
chr19 11254073 11254084 TFAP2A JASPAR yes 70804107
chr19 11254073 11254084 TFAP2B JASPAR yes 70804108
chr19 11254073 11254084 TFAP2C JASPAR yes 70804109
chr19 11254073 11254084 TFAP2A JASPAR yes 108571743
chr19 11254073 11254084 TFAP2B JASPAR yes 108571744
chr19 11254073 11254084 TFAP2C JASPAR yes 108571745
chr19 11254073 11254084 TFAP2A JASPAR yes 112458099
chr19 11254073 11254084 TFAP2B JASPAR yes 112458100
chr19 11254073 11254084 TFAP2C JASPAR yes 112458101
chr19 11254096 11254112 ZNF143 JASPAR yes 70804110
chr19 11254096 11254112 ZNF143 JASPAR yes 108571746
chr19 11254096 11254112 ZNF143 JASPAR yes 112458102
chr19 11254101 11254107 SOX10 JASPAR yes 70804111
chr19 11254101 11254107 SOX10 JASPAR yes 108571747
chr19 11254101 11254107 SOX10 JASPAR yes 112458103
chr19 11254112 11254123 FLI1 JASPAR yes 70804112
chr19 11254112 11254123 FLI1 JASPAR yes 108571748
chr19 11254112 11254123 FLI1 JASPAR yes 112458104
chr19 11254114 11254121 SPI1 JASPAR yes 70804113
chr19 11254114 11254121 SPI1 JASPAR yes 108571749
chr19 11254114 11254121 SPI1 JASPAR yes 112458105
chr19 11254114 11254122 EHF JASPAR yes 70804114
chr19 11254114 11254122 EHF JASPAR yes 108571750
chr19 11254114 11254122 EHF JASPAR yes 112458106
chr19 11254120 11254132 TFAP2B JASPAR yes 70804115
chr19 11254120 11254132 TFAP2C JASPAR yes 70804116
chr19 11254120 11254132 TFAP2B JASPAR yes 108571751
chr19 11254120 11254132 TFAP2C JASPAR yes 108571752
chr19 11254120 11254132 TFAP2B JASPAR yes 112458107
chr19 11254120 11254132 TFAP2C JASPAR yes 112458108
chr19 11254130 11254145 RFX5 JASPAR yes 70804117
chr19 11254130 11254145 RFX5 JASPAR yes 108571753
chr19 11254130 11254145 RFX5 JASPAR yes 112458109
chr19 11254135 11254148 SCRT2 JASPAR yes 70804118
chr19 11254135 11254148 SCRT2 JASPAR yes 108571754
chr19 11254135 11254148 SCRT2 JASPAR yes 112458110
chr19 11254137 11254149 TAL1 JASPAR yes 70804119
chr19 11254137 11254149 TAL1 JASPAR yes 108571755
chr19 11254137 11254149 TAL1 JASPAR yes 112458111
chr19 11254138 11254151 ZBTB18 JASPAR yes 70804120
chr19 11254138 11254151 ZBTB18 JASPAR yes 108571756
chr19 11254138 11254151 ZBTB18 JASPAR yes 112458112
chr19 11254139 11254149 FIGLA JASPAR yes 70804121
chr19 11254139 11254149 MSC JASPAR yes 70804122
chr19 11254139 11254149 TFAP4 JASPAR yes 70804123
chr19 11254139 11254149 FIGLA JASPAR yes 108571757
chr19 11254139 11254149 MSC JASPAR yes 108571758
chr19 11254139 11254149 TFAP4 JASPAR yes 108571759
chr19 11254139 11254149 FIGLA JASPAR yes 112458113
chr19 11254139 11254149 MSC JASPAR yes 112458114
chr19 11254139 11254149 TFAP4 JASPAR yes 112458115
chr19 11254139 11254151 TAL1 JASPAR yes 70804124
chr19 11254139 11254151 TAL1 JASPAR yes 108571760
chr19 11254139 11254151 TAL1 JASPAR yes 112458116
chr19 11254150 11254161 FLI1 JASPAR yes 70804125
chr19 11254150 11254161 FLI1 JASPAR yes 108571761
chr19 11254150 11254161 FLI1 JASPAR yes 112458117
chr19 11254151 11254155 YY1 TRANSFAC yes 70804126
chr19 11254151 11254155 YY1 TRANSFAC yes 108571762
chr19 11254151 11254155 YY1 TRANSFAC yes 112458118
chr19 11254151 11254161 ERF JASPAR yes 70804127
chr19 11254151 11254161 ERG JASPAR yes 70804128
chr19 11254151 11254161 ETS1 JASPAR yes 70804129
chr19 11254151 11254161 FEV JASPAR yes 70804130
chr19 11254151 11254161 FLI1 JASPAR yes 70804131
chr19 11254151 11254161 ERF JASPAR yes 108571763
chr19 11254151 11254161 ERG JASPAR yes 108571764
chr19 11254151 11254161 ETS1 JASPAR yes 108571765
chr19 11254151 11254161 FEV JASPAR yes 108571766
chr19 11254151 11254161 FLI1 JASPAR yes 108571767
chr19 11254151 11254161 ERF JASPAR yes 112458119
chr19 11254151 11254161 ERG JASPAR yes 112458120
chr19 11254151 11254161 ETS1 JASPAR yes 112458121
chr19 11254151 11254161 FEV JASPAR yes 112458122
chr19 11254151 11254161 FLI1 JASPAR yes 112458123
chr19 11254151 11254162 ELF5 JASPAR yes 70804132
chr19 11254151 11254162 ETV2 JASPAR yes 70804133
chr19 11254151 11254162 ELF5 JASPAR yes 108571768
chr19 11254151 11254162 ETV2 JASPAR yes 108571769
chr19 11254151 11254162 ELF5 JASPAR yes 112458124
chr19 11254151 11254162 ETV2 JASPAR yes 112458125
chr19 11254151 11254164 ELF1 JASPAR yes 70804134
chr19 11254151 11254164 ELF1 JASPAR yes 108571770
chr19 11254151 11254164 ELF1 JASPAR yes 112458126
chr19 11254152 11254160 FEV JASPAR yes 70804135
chr19 11254152 11254160 FEV JASPAR yes 108571771
chr19 11254152 11254160 FEV JASPAR yes 112458127
chr19 11254156 11254171 RFX5 JASPAR yes 70804136
chr19 11254156 11254171 RFX5 JASPAR yes 108571772
chr19 11254156 11254171 RFX5 JASPAR yes 112458128
chr19 11254170 11254180 MZF1 JASPAR yes 70804137
chr19 11254170 11254180 MZF1 JASPAR yes 108571773
chr19 11254170 11254180 MZF1 JASPAR yes 112458129
chr19 11254184 11254204 RREB1 JASPAR yes 70804138
chr19 11254184 11254204 RREB1 JASPAR yes 108571774
chr19 11254184 11254204 RREB1 JASPAR yes 112458130
chr19 11254187 11254191 YY1 TRANSFAC yes 70804139
chr19 11254187 11254191 YY1 TRANSFAC yes 108571775
chr19 11254187 11254191 YY1 TRANSFAC yes 112458131
chr19 11254189 11254201 ZBTB7B JASPAR yes 70804140
chr19 11254189 11254201 ZBTB7B JASPAR yes 108571776
chr19 11254189 11254201 ZBTB7B JASPAR yes 112458132
chr19 11254192 11254197 SP1 TRANSFAC yes 70804141
chr19 11254192 11254197 SP1 TRANSFAC yes 108571777
chr19 11254192 11254197 SP1 TRANSFAC yes 112458133
chr19 11254208 11254222 BATF3 JASPAR yes 70804142
chr19 11254208 11254222 BATF3 JASPAR yes 108571778
chr19 11254208 11254222 BATF3 JASPAR yes 112458134
chr19 11254211 11254216 ATF1 TRANSFAC yes 70804143
chr19 11254211 11254216 ATF1 TRANSFAC yes 108571779
chr19 11254211 11254216 ATF1 TRANSFAC yes 112458135
chr19 11254212 11254224 MYBL1 JASPAR yes 70804144
chr19 11254212 11254224 MYBL1 JASPAR yes 108571780
chr19 11254212 11254224 MYBL1 JASPAR yes 112458136
chr19 11254217 11254220 MYB TRANSFAC yes 70804145
chr19 11254217 11254220 MYB TRANSFAC yes 108571781
chr19 11254217 11254220 MYB TRANSFAC yes 112458137
chr19 11254230 11254235 SP1 TRANSFAC yes 70804146
chr19 11254230 11254235 SP1 TRANSFAC yes 108571782
chr19 11254230 11254235 SP1 TRANSFAC yes 112458138
chr19 11254237 11254247 NFKB1 JASPAR yes 70804147
chr19 11254237 11254247 NFKB1 JASPAR yes 108571783
chr19 11254237 11254247 NFKB1 JASPAR yes 112458139
chr19 11254239 11254259 RREB1 JASPAR yes 70804148
chr19 11254239 11254259 RREB1 JASPAR yes 108571784
chr19 11254239 11254259 RREB1 JASPAR yes 112458140
chr19 11254242 11254262 RREB1 JASPAR yes 70804149
chr19 11254242 11254262 RREB1 JASPAR yes 108571785
chr19 11254242 11254262 RREB1 JASPAR yes 112458141
chr19 11254243 11254263 RREB1 JASPAR yes 70804150
chr19 11254243 11254263 RREB1 JASPAR yes 108571786
chr19 11254243 11254263 RREB1 JASPAR yes 112458142
chr19 11254244 11254264 RREB1 JASPAR yes 70804151
chr19 11254244 11254264 RREB1 JASPAR yes 108571787
chr19 11254244 11254264 RREB1 JASPAR yes 112458143
chr19 11254268 11254272 H1TF2 TRANSFAC yes 70804152
chr19 11254268 11254272 NFE TRANSFAC yes 70804153
chr19 11254268 11254272 SRF TRANSFAC yes 70804154
chr19 11254268 11254272 H1TF2 TRANSFAC yes 108571788
chr19 11254268 11254272 NFE TRANSFAC yes 108571789
chr19 11254268 11254272 SRF TRANSFAC yes 108571790
chr19 11254268 11254272 H1TF2 TRANSFAC yes 112458144
chr19 11254268 11254272 NFE TRANSFAC yes 112458145
chr19 11254268 11254272 SRF TRANSFAC yes 112458146
chr19 11254268 11254279 ESRRA JASPAR yes 70804155
chr19 11254268 11254279 ESRRA JASPAR yes 108571791
chr19 11254268 11254279 ESRRA JASPAR yes 112458147
chr19 11254268 11254283 ZBTB33 JASPAR yes 70804156
chr19 11254268 11254283 ZBTB33 JASPAR yes 108571792
chr19 11254268 11254283 ZBTB33 JASPAR yes 112458148
chr19 11254270 11254283 ZBED1 JASPAR yes 70804157
chr19 11254270 11254283 ZBED1 JASPAR yes 108571793
chr19 11254270 11254283 ZBED1 JASPAR yes 112458149
SNP sites on vista28621[chr19:11253991-11254271]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 11254007 rs555904938 T G
E2F1 POLR2A REL TFAP2A TFAP2C
5441454
chr19 11254206 rs150974061 C A
E2F1 POLR2A TFAP2C
5441455
Genes possibly regulated by vista28621[chr19:11253991-11254271]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 11200038 11244492 + LDLR ENSG00000130164.7 11200038 0.9 1.0 17029 46047
chr19 11242196 11266484 - SPC24 ENSG00000161888.7 11266484 0.92 1.0 17030 87787
chr19 11274943 11308467 - KANK2 ENSG00000197256.6 11308467 0.85 0.99 17031 45804
chr19 11348178 11352619 + C19orf80 ENSG00000130173.9 11348178 1.0 1.0 17033 6093
Expression level of Genes
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miRNAs possibly regulated by vista28621[chr19:11253991-11254271]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results