EnhancerDB
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  3. vista28623[chr19:11375157-11375492]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28623[chr19:11375157-11375492]
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Tissue distribution of vista28623
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Transcription factor that possibly regulate vista28623[chr19:11375157-11375492]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 11374996 11375652 POLR2A UCSC Txn Factor no Conserved 108385011
chr19 11375097 11375346 MYC UCSC Txn Factor no Conserved 108385023
chr19 11375199 11375211 HES7 JASPAR yes 70804194
chr19 11375199 11375211 PKNOX1 JASPAR yes 70804195
chr19 11375199 11375211 PKNOX2 JASPAR yes 70804196
chr19 11375199 11375211 TGIF1 JASPAR yes 70804197
chr19 11375199 11375211 TGIF2 JASPAR yes 70804198
chr19 11375200 11375210 TFEB JASPAR yes 70804199
chr19 11375200 11375210 TFEC JASPAR yes 70804200
chr19 11375200 11375211 USF1 JASPAR yes 70804201
chr19 11375200 11375211 USF2 JASPAR yes 70804202
chr19 11375205 11375219 MTF1 JASPAR yes 70804203
chr19 11375208 11375218 MAX JASPAR yes 70804204
chr19 11375211 11375225 MTF1 JASPAR yes 70804205
chr19 11375221 11375233 HES5 JASPAR yes 70804206
chr19 11375222 11375232 BHLHE40 JASPAR yes 70804207
chr19 11375222 11375232 HEY1 JASPAR yes 70804208
chr19 11375222 11375232 HEY2 JASPAR yes 70804209
chr19 11375222 11375232 MAX JASPAR yes 70804210
chr19 11375222 11375232 MNT JASPAR yes 70804211
chr19 11375222 11375232 TFE3 JASPAR yes 70804212
chr19 11375222 11375232 TFEB JASPAR yes 70804213
chr19 11375223 11375230 USF1 JASPAR yes 70804214
chr19 11375223 11375233 MAX JASPAR yes 70804215
chr19 11375224 11375229 MYC TRANSFAC yes 70804216
chr19 11375224 11375229 USF1 TRANSFAC yes 70804217
chr19 11375224 11375229 USF2 TRANSFAC yes 70804218
chr19 11375231 11375240 THAP1 JASPAR yes 70804219
chr19 11375242 11375246 H4TF2 TRANSFAC yes 70804220
chr19 11375257 11375267 FIGLA JASPAR yes 70804221
chr19 11375270 11375275 SP1 TRANSFAC yes 70804222
chr19 11375270 11375290 RREB1 JASPAR yes 70804223
chr19 11375278 11375293 ZIC3 JASPAR yes 70804224
chr19 11375282 11375288 SP1 TRANSFAC yes 70804225
chr19 11375305 11375311 SP1 TRANSFAC yes 70804226
chr19 11375313 11375326 TFAP2B JASPAR yes 70804227
chr19 11375341 11375345 LFA1 TRANSFAC yes 70804228
chr19 11375343 11375354 FLI1 JASPAR yes 70804229
chr19 11375344 11375352 FEV JASPAR yes 70804230
chr19 11375349 11375361 POU2F1 JASPAR yes 70804231
chr19 11375349 11375362 POU3F3 JASPAR yes 70804232
chr19 11375349 11375363 POU1F1 JASPAR yes 70804233
chr19 11375350 11375362 POU3F1 JASPAR yes 70804234
chr19 11375350 11375362 POU3F2 JASPAR yes 70804235
chr19 11375350 11375363 POU2F2 JASPAR yes 70804236
chr19 11375351 11375360 POU3F4 JASPAR yes 70804237
chr19 11375351 11375360 POU5F1B JASPAR yes 70804238
chr19 11375375 11375379 YY1 TRANSFAC yes 70804239
chr19 11375408 11375418 ELK3 JASPAR yes 70804240
chr19 11375408 11375418 ERF JASPAR yes 70804241
chr19 11375408 11375418 ERG JASPAR yes 70804242
chr19 11375408 11375418 ETS1 JASPAR yes 70804243
chr19 11375408 11375418 ETV1 JASPAR yes 70804244
chr19 11375408 11375418 ETV3 JASPAR yes 70804245
chr19 11375408 11375418 ETV4 JASPAR yes 70804246
chr19 11375408 11375418 ETV5 JASPAR yes 70804247
chr19 11375408 11375418 FEV JASPAR yes 70804248
chr19 11375408 11375418 FLI1 JASPAR yes 70804249
chr19 11375408 11375419 ETV2 JASPAR yes 70804250
chr19 11375408 11375419 SPDEF JASPAR yes 70804251
chr19 11375409 11375418 ELK4 JASPAR yes 70804252
chr19 11375410 11375415 GATA2 JASPAR yes 70804253
chr19 11375410 11375417 GATA1 TRANSFAC yes 70804254
chr19 11375414 11375427 SMAD2 JASPAR yes 70804255
chr19 11375422 11375436 STAT1 JASPAR yes 70804256
chr19 11375425 11375446 ZNF263 JASPAR yes 70804257
chr19 11375426 11375431 ETS2 TRANSFAC yes 70804258
chr19 11375442 11375463 ZNF263 JASPAR yes 70804259
chr19 11375452 11375469 PAX1 JASPAR yes 70804260
chr19 11375452 11375469 PAX9 JASPAR yes 70804261
chr19 11375453 11375467 PAX6 JASPAR yes 70804262
chr19 11375453 11375472 PAX5 JASPAR yes 70804263
chr19 11375461 11375476 RFX5 JASPAR yes 70804264
chr19 11375465 11375478 ELF1 JASPAR yes 70804265
chr19 11375468 11375475 ETS1 TRANSFAC yes 70804266
chr19 11375468 11375478 GABPA JASPAR yes 70804267
chr19 11375475 11375490 RFX5 JASPAR yes 70804268
chr19 11375486 11375491 USF2 TRANSFAC yes 70804269
SNP sites on vista28623[chr19:11375157-11375492]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 11375228 rs114280475 G A
BHLHE40 HES5 HEY1 HEY2 MAX MNT MYC POLR2A TFE3 TFEB USF1 USF2
5442144
chr19 11375264 rs552436903 T G
FIGLA MYC POLR2A
5442145
chr19 11375307 rs547679716 C T
MYC POLR2A SP1
5442146
Genes possibly regulated by vista28623[chr19:11375157-11375492]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 11274943 11308467 - KANK2 ENSG00000197256.6 11308467 0.85 0.99 17031 33310
chr19 11309971 11373157 - DOCK6 ENSG00000130158.9 11373157 0.81 1.0 17032 98000
chr19 11348178 11352619 + C19orf80 ENSG00000130173.9 11348178 1.0 1.0 17033 73021
chr19 11406824 11437672 + TSPAN16 ENSG00000130167.9 11406824 0.92 1.0 17034 68668
chr19 11432722 11456946 - RAB3D ENSG00000105514.3 11456946 0.83 1.0 17035 18546
chr19 11453452 11457194 - TMEM205 ENSG00000105518.9 11457194 0.8 0.99 17036 18298
chr19 11455360 11465620 + CCDC159 ENSG00000183401.7 11455360 0.58 1.0 17037 20132
chr19 11466062 11476374 + DKFZP761J1410 ENSG00000105520.6 11466062 0.71 1.0 17038 9430
Expression level of Genes
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miRNAs possibly regulated by vista28623[chr19:11375157-11375492]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results