EnhancerDB
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  3. vista28630[chr19:11642939-11643084]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28630[chr19:11642939-11643084]
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Tissue distribution of vista28630
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Transcription factor that possibly regulate vista28630[chr19:11642939-11643084]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 11642784 11643240 JUND UCSC Txn Factor no Conserved 108385346
chr19 11642799 11643199 FOS UCSC Txn Factor no Conserved 108385348
chr19 11642872 11643112 FOSL2 UCSC Txn Factor no Conserved 108385358
chr19 11642945 11642955 HMBOX1 JASPAR yes 70804604
chr19 11642947 11642950 MYB TRANSFAC yes 70804605
chr19 11642962 11642966 YY1 TRANSFAC yes 70804606
chr19 11642974 11642988 JUN JASPAR yes 70804607
chr19 11642976 11642987 BATF JASPAR yes 70804608
chr19 11642977 11642988 FOSL2 JASPAR yes 70804609
chr19 11642977 11642988 JUNB JASPAR yes 70804610
chr19 11642978 11642989 FOS JASPAR yes 70804611
chr19 11642978 11642989 FOSL1 JASPAR yes 70804612
chr19 11642978 11642989 JUND JASPAR yes 70804613
chr19 11642978 11642989 NFE2 JASPAR yes 70804614
chr19 11642979 11642988 JDP2 JASPAR yes 70804615
chr19 11642979 11642990 FOSL2 JASPAR yes 70804616
chr19 11642979 11642990 JUNB JASPAR yes 70804617
chr19 11642979 11642993 JUN JASPAR yes 70804618
chr19 11642979 11642997 ESR2 JASPAR yes 70804619
chr19 11642985 11643000 JUND JASPAR yes 70804620
chr19 11642988 11643000 JDP2 JASPAR yes 70804621
chr19 11642988 11643003 JUND JASPAR yes 70804622
chr19 11643024 11643035 DMRT3 JASPAR yes 70804623
chr19 11643026 11643031 GATA2 JASPAR yes 70804624
chr19 11643049 11643062 ELF3 JASPAR yes 70804625
chr19 11643050 11643061 ELF5 JASPAR yes 70804626
chr19 11643050 11643062 EHF JASPAR yes 70804627
chr19 11643050 11643063 ELF1 JASPAR yes 70804628
chr19 11643060 11643071 FOXA1 JASPAR yes 70804629
chr19 11643060 11643075 FOXA1 JASPAR yes 70804630
SNP sites on vista28630[chr19:11642939-11643084]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 11642988 rs192712910 T C
ESR2 FOS FOSL1 FOSL2 JDP2 JUN JUNB JUND NFE2
5443187
chr19 11643077 rs149901844 G A
FOS FOSL2 JUND
5443188
Genes possibly regulated by vista28630[chr19:11642939-11643084]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 11531272 11546603 - CCDC151 ENSG00000198003.7 11546603 0.84 1.0 17042 3664
chr19 11546109 11561783 + PRKCSH ENSG00000130175.5 11546109 0.71 1.0 17043 3170
chr19 11562141 11591861 - ELAVL3 ENSG00000196361.5 11591861 0.89 0.98 17044 48922
chr19 11577055 11616513 - CTC-398G3.6 ENSG00000267477.1 11616513 0.99 1.0 17045 73574
chr19 11594242 11616738 - ZNF653 ENSG00000161914.5 11616738 0.6 1.0 17046 73799
chr19 11616731 11639989 - ECSIT ENSG00000130159.9 11639989 0.56 1.0 17047 97050
chr19 11649532 11661138 + CNN1 ENSG00000130176.3 11649532 0.93 0.97 17048 93552
chr19 11661962 11670051 - ELOF1 ENSG00000130165.6 11670051 0.75 0.99 17049 73033
chr19 11670189 11729950 + ZNF627 ENSG00000198551.5 11670189 0.8 0.99 17050 72895
chr19 11685475 11689823 - ACP5 ENSG00000102575.6 11689823 0.9 0.96 17051 53261
Expression level of Genes
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miRNAs possibly regulated by vista28630[chr19:11642939-11643084]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results