EnhancerDB
  1. Home
  2. Enhancers
  3. vista28634[chr19:11679134-11679427]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28634[chr19:11679134-11679427]
Back to top
Tissue distribution of vista28634
Back to top
Transcription factor that possibly regulate vista28634[chr19:11679134-11679427]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 11678996 11679452 JUND UCSC Txn Factor no Conserved 108385471
chr19 11679028 11679275 SPI1 UCSC Txn Factor no Conserved 108385478
chr19 11679090 11679526 RUNX3 UCSC Txn Factor no Conserved 108385493
chr19 11679188 11679391 NR2F2 UCSC Txn Factor no Conserved 108385505
chr19 11679133 11679144 ESRRA JASPAR yes 70804827
chr19 11679133 11679144 ESRRA JASPAR yes 112468479
chr19 11679144 11679158 JUN JASPAR yes 70804828
chr19 11679144 11679158 JUN JASPAR yes 112468480
chr19 11679147 11679168 IRF1 JASPAR yes 70804829
chr19 11679147 11679168 IRF1 JASPAR yes 112468481
chr19 11679150 11679164 SPI1 JASPAR yes 70804830
chr19 11679150 11679164 SPI1 JASPAR yes 112468482
chr19 11679186 11679190 H4TF2 TRANSFAC yes 70804831
chr19 11679186 11679190 H4TF2 TRANSFAC yes 112468483
chr19 11679201 11679214 NR2F1 JASPAR yes 70804832
chr19 11679201 11679214 NR2F1 JASPAR yes 112468484
chr19 11679204 11679212 NR4A2 JASPAR yes 70804833
chr19 11679204 11679212 NR4A2 JASPAR yes 112468485
chr19 11679205 11679219 RXRG JASPAR yes 70804834
chr19 11679205 11679219 RXRG JASPAR yes 112468486
chr19 11679228 11679232 NFE TRANSFAC yes 70804835
chr19 11679228 11679232 NFE TRANSFAC yes 112468487
chr19 11679240 11679251 FOS JASPAR yes 70804836
chr19 11679240 11679251 FOSL1 JASPAR yes 70804837
chr19 11679240 11679251 JUND JASPAR yes 70804838
chr19 11679240 11679251 FOS JASPAR yes 112468488
chr19 11679240 11679251 FOSL1 JASPAR yes 112468489
chr19 11679240 11679251 JUND JASPAR yes 112468490
chr19 11679241 11679252 JUNB JASPAR yes 70804839
chr19 11679241 11679252 JUNB JASPAR yes 112468491
chr19 11679242 11679249 JUN TRANSFAC yes 70804840
chr19 11679242 11679249 JUN TRANSFAC yes 112468492
chr19 11679266 11679274 NR4A2 JASPAR yes 70804841
chr19 11679266 11679274 NR4A2 JASPAR yes 112468493
chr19 11679278 11679293 RUNX2 JASPAR yes 70804842
chr19 11679278 11679293 RUNX2 JASPAR yes 112468494
chr19 11679281 11679292 RUNX1 JASPAR yes 70804843
chr19 11679281 11679292 RUNX1 JASPAR yes 112468495
chr19 11679282 11679292 RUNX3 JASPAR yes 70804844
chr19 11679282 11679292 RUNX3 JASPAR yes 112468496
chr19 11679283 11679292 RUNX2 JASPAR yes 70804845
chr19 11679283 11679292 RUNX2 JASPAR yes 112468497
chr19 11679290 11679302 PBX1 JASPAR yes 70804846
chr19 11679290 11679302 PBX1 JASPAR yes 112468498
chr19 11679306 11679323 BCL6B JASPAR yes 70804847
chr19 11679306 11679323 BCL6B JASPAR yes 112468499
chr19 11679307 11679322 STAT1 JASPAR yes 70804848
chr19 11679307 11679322 STAT1 JASPAR yes 112468500
chr19 11679307 11679324 BCL6B JASPAR yes 70804849
chr19 11679307 11679324 BCL6B JASPAR yes 112468501
chr19 11679308 11679315 SPI1 JASPAR yes 70804850
chr19 11679308 11679315 SPI1 JASPAR yes 112468502
chr19 11679309 11679320 STAT1 JASPAR yes 70804851
chr19 11679309 11679320 STAT3 JASPAR yes 70804852
chr19 11679309 11679320 STAT1 JASPAR yes 112468503
chr19 11679309 11679320 STAT3 JASPAR yes 112468504
chr19 11679310 11679325 HSF1 JASPAR yes 70804853
chr19 11679310 11679325 HSF1 JASPAR yes 112468505
chr19 11679327 11679331 ESR1 TRANSFAC yes 70804854
chr19 11679327 11679331 ESR1 TRANSFAC yes 112468506
chr19 11679333 11679348 MYBL2 JASPAR yes 70804855
chr19 11679333 11679348 MYBL2 JASPAR yes 112468507
chr19 11679347 11679351 H1TF2 TRANSFAC yes 70804856
chr19 11679347 11679351 NFE TRANSFAC yes 70804857
chr19 11679347 11679351 SRF TRANSFAC yes 70804858
chr19 11679347 11679351 H1TF2 TRANSFAC yes 112468508
chr19 11679347 11679351 NFE TRANSFAC yes 112468509
chr19 11679347 11679351 SRF TRANSFAC yes 112468510
chr19 11679352 11679366 FOXF2 JASPAR yes 70804859
chr19 11679352 11679366 FOXF2 JASPAR yes 112468511
chr19 11679354 11679365 FOXB1 JASPAR yes 70804860
chr19 11679354 11679365 FOXC1 JASPAR yes 70804861
chr19 11679354 11679365 FOXB1 JASPAR yes 112468512
chr19 11679354 11679365 FOXC1 JASPAR yes 112468513
chr19 11679354 11679366 FOXC2 JASPAR yes 70804862
chr19 11679354 11679366 FOXC2 JASPAR yes 112468514
chr19 11679355 11679373 NR3C1 JASPAR yes 70804863
chr19 11679355 11679373 NR3C1 JASPAR yes 112468515
chr19 11679377 11679392 HNF1A JASPAR yes 70804864
chr19 11679377 11679392 HNF1A JASPAR yes 112468516
chr19 11679380 11679386 TBP TRANSFAC yes 70804865
chr19 11679380 11679386 TBP TRANSFAC yes 112468517
chr19 11679382 11679394 IRF1 JASPAR yes 70804866
chr19 11679382 11679394 IRF1 JASPAR yes 112468518
chr19 11679382 11679397 STAT2 JASPAR yes 70804867
chr19 11679382 11679397 STAT2 JASPAR yes 112468519
chr19 11679390 11679405 RUNX2 JASPAR yes 70804868
chr19 11679390 11679405 RUNX2 JASPAR yes 112468520
chr19 11679391 11679401 RUNX3 JASPAR yes 70804869
chr19 11679391 11679401 RUNX3 JASPAR yes 112468521
chr19 11679398 11679418 TP53 JASPAR yes 70804870
chr19 11679398 11679418 TP53 JASPAR yes 112468522
SNP sites on vista28634[chr19:11679134-11679427]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 11679152 rs549607350 ACTT A
IRF1 JUN JUND RUNX3 SPI1
5443331
chr19 11679261 rs58513885 G A
JUND NR2F2 RUNX3 SPI1
5443332
chr19 11679371 rs1016750553 C CA
JUND NR2F2 NR3C1 RUNX3
5443333
chr19 11679371 rs567620870 C CA
JUND NR2F2 NR3C1 RUNX3
5443334
chr19 11679371 rs57220577 CA C
JUND NR2F2 NR3C1 RUNX3
5443335
chr19 11679371 rs796327618 CA C
JUND NR2F2 NR3C1 RUNX3
5443336
Genes possibly regulated by vista28634[chr19:11679134-11679427]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 11562141 11591861 - ELAVL3 ENSG00000196361.5 11591861 0.89 0.98 17044 12727
chr19 11577055 11616513 - CTC-398G3.6 ENSG00000267477.1 11616513 0.99 1.0 17045 37379
chr19 11594242 11616738 - ZNF653 ENSG00000161914.5 11616738 0.6 1.0 17046 37604
chr19 11616731 11639989 - ECSIT ENSG00000130159.9 11639989 0.56 1.0 17047 60855
chr19 11649532 11661138 + CNN1 ENSG00000130176.3 11649532 0.93 0.97 17048 70398
chr19 11661962 11670051 - ELOF1 ENSG00000130165.6 11670051 0.75 0.99 17049 90917
chr19 11670189 11729950 + ZNF627 ENSG00000198551.5 11670189 0.8 0.99 17050 91055
chr19 11685475 11689823 - ACP5 ENSG00000102575.6 11689823 0.9 0.96 17051 89604
Expression level of Genes
Back to top
miRNAs possibly regulated by vista28634[chr19:11679134-11679427]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results