EnhancerDB
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  3. vista28636[chr19:11691804-11692141]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28636[chr19:11691804-11692141]
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Tissue distribution of vista28636
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Transcription factor that possibly regulate vista28636[chr19:11691804-11692141]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 11691793 11691804 HOXA10 JASPAR yes 70804907
chr19 11691793 11691804 HOXA10 JASPAR yes 112469460
chr19 11691794 11691804 HOXA13 JASPAR yes 70804908
chr19 11691794 11691804 HOXB13 JASPAR yes 70804909
chr19 11691794 11691804 HOXD13 JASPAR yes 70804910
chr19 11691794 11691804 HOXA13 JASPAR yes 112469462
chr19 11691794 11691804 HOXB13 JASPAR yes 112469463
chr19 11691794 11691804 HOXD13 JASPAR yes 112469464
chr19 11691818 11691822 NFE TRANSFAC yes 70804911
chr19 11691818 11691822 NFE TRANSFAC yes 112469465
chr19 11691818 11691823 GATA1 TRANSFAC yes 70804912
chr19 11691818 11691823 GATA1 TRANSFAC yes 112469466
chr19 11691818 11691824 GATA3 JASPAR yes 70804913
chr19 11691818 11691824 GATA3 JASPAR yes 112469467
chr19 11691819 11691840 ZNF263 JASPAR yes 70804914
chr19 11691819 11691840 ZNF263 JASPAR yes 112469468
chr19 11691830 11691851 REST JASPAR yes 70804915
chr19 11691830 11691851 REST JASPAR yes 112469469
chr19 11691831 11691850 REST JASPAR yes 70804916
chr19 11691831 11691850 REST JASPAR yes 112469470
chr19 11691840 11691861 MAFG JASPAR yes 70804917
chr19 11691840 11691861 MAFG JASPAR yes 112469471
chr19 11691855 11691876 ZNF263 JASPAR yes 70804918
chr19 11691855 11691876 ZNF263 JASPAR yes 112469472
chr19 11691872 11691883 EBF1 JASPAR yes 70804919
chr19 11691872 11691883 EBF1 JASPAR yes 112469473
chr19 11691916 11691930 JUN JASPAR yes 70804920
chr19 11691916 11691930 JUN JASPAR yes 112469474
chr19 11691919 11691930 FOSL2 JASPAR yes 70804921
chr19 11691919 11691930 JUNB JASPAR yes 70804922
chr19 11691919 11691930 FOSL2 JASPAR yes 112469475
chr19 11691919 11691930 JUNB JASPAR yes 112469476
chr19 11691920 11691931 FOS JASPAR yes 70804923
chr19 11691920 11691931 FOSL1 JASPAR yes 70804924
chr19 11691920 11691931 JUND JASPAR yes 70804925
chr19 11691920 11691931 FOS JASPAR yes 112469477
chr19 11691920 11691931 FOSL1 JASPAR yes 112469478
chr19 11691920 11691931 JUND JASPAR yes 112469479
chr19 11691921 11691928 JUN TRANSFAC yes 70804926
chr19 11691921 11691928 JUN TRANSFAC yes 112469480
chr19 11691921 11691935 JUN JASPAR yes 70804927
chr19 11691921 11691935 JUN JASPAR yes 112469481
chr19 11691922 11691933 BATF JASPAR yes 70804928
chr19 11691922 11691933 BATF JASPAR yes 112469482
chr19 11691929 11691950 ZNF263 JASPAR yes 70804929
chr19 11691929 11691950 ZNF263 JASPAR yes 112469483
chr19 11691931 11691942 E2F6 JASPAR yes 70804930
chr19 11691931 11691942 E2F6 JASPAR yes 112469484
chr19 11691932 11691953 ZNF263 JASPAR yes 70804931
chr19 11691932 11691953 ZNF263 JASPAR yes 112469485
chr19 11691956 11691960 YY1 TRANSFAC yes 70804932
chr19 11691956 11691960 YY1 TRANSFAC yes 112469486
chr19 11691979 11691991 PKNOX1 JASPAR yes 70804933
chr19 11691979 11691991 PKNOX2 JASPAR yes 70804934
chr19 11691979 11691991 TGIF1 JASPAR yes 70804935
chr19 11691979 11691991 TGIF2 JASPAR yes 70804936
chr19 11691979 11691991 PKNOX1 JASPAR yes 112469487
chr19 11691979 11691991 PKNOX2 JASPAR yes 112469488
chr19 11691979 11691991 TGIF1 JASPAR yes 112469489
chr19 11691979 11691991 TGIF2 JASPAR yes 112469490
chr19 11691987 11691995 FOXO3 JASPAR yes 70804937
chr19 11691987 11691995 FOXO3 JASPAR yes 112469491
chr19 11692005 11692024 CTCF JASPAR yes 70804938
chr19 11692005 11692024 CTCF JASPAR yes 112469492
chr19 11692010 11692023 SCRT2 JASPAR yes 70804939
chr19 11692010 11692023 SCRT2 JASPAR yes 112469493
chr19 11692013 11692028 RFX5 JASPAR yes 70804940
chr19 11692013 11692028 RFX5 JASPAR yes 112469494
chr19 11692018 11692024 NFIC JASPAR yes 70804941
chr19 11692018 11692024 NFIC JASPAR yes 112469495
chr19 11692020 11692024 H1TF2 TRANSFAC yes 70804942
chr19 11692020 11692024 NFE TRANSFAC yes 70804943
chr19 11692020 11692024 SRF TRANSFAC yes 70804944
chr19 11692020 11692024 H1TF2 TRANSFAC yes 112469496
chr19 11692020 11692024 NFE TRANSFAC yes 112469497
chr19 11692020 11692024 SRF TRANSFAC yes 112469498
chr19 11692032 11692036 H4TF2 TRANSFAC yes 70804945
chr19 11692032 11692036 H4TF2 TRANSFAC yes 112469499
chr19 11692049 11692053 NFE TRANSFAC yes 70804946
chr19 11692049 11692053 NFE TRANSFAC yes 112469500
chr19 11692058 11692079 ZNF263 JASPAR yes 70804947
chr19 11692058 11692079 ZNF263 JASPAR yes 112469501
chr19 11692059 11692063 H1TF2 TRANSFAC yes 70804948
chr19 11692059 11692063 NFE TRANSFAC yes 70804949
chr19 11692059 11692063 SRF TRANSFAC yes 70804950
chr19 11692059 11692063 H1TF2 TRANSFAC yes 112469502
chr19 11692059 11692063 NFE TRANSFAC yes 112469503
chr19 11692059 11692063 SRF TRANSFAC yes 112469504
chr19 11692061 11692082 ZNF263 JASPAR yes 70804951
chr19 11692061 11692082 ZNF263 JASPAR yes 112469505
chr19 11692062 11692083 ZNF263 JASPAR yes 70804952
chr19 11692062 11692083 ZNF263 JASPAR yes 112469506
chr19 11692070 11692078 EHF JASPAR yes 70804953
chr19 11692070 11692078 EHF JASPAR yes 112469507
chr19 11692072 11692077 ETS2 TRANSFAC yes 70804954
chr19 11692072 11692077 ETS2 TRANSFAC yes 112469508
chr19 11692074 11692082 EHF JASPAR yes 70804955
chr19 11692074 11692082 EHF JASPAR yes 112469509
chr19 11692077 11692098 ZNF263 JASPAR yes 70804956
chr19 11692077 11692098 ZNF263 JASPAR yes 112469510
chr19 11692083 11692089 NFIC JASPAR yes 70804957
chr19 11692083 11692089 NFIC JASPAR yes 112469511
chr19 11692085 11692089 H1TF2 TRANSFAC yes 70804958
chr19 11692085 11692089 NFE TRANSFAC yes 70804959
chr19 11692085 11692089 SRF TRANSFAC yes 70804960
chr19 11692085 11692089 H1TF2 TRANSFAC yes 112469512
chr19 11692085 11692089 NFE TRANSFAC yes 112469513
chr19 11692085 11692089 SRF TRANSFAC yes 112469514
chr19 11692089 11692110 IRF1 JASPAR yes 70804961
chr19 11692089 11692110 IRF1 JASPAR yes 112469515
chr19 11692091 11692106 PRDM1 JASPAR yes 70804962
chr19 11692091 11692106 PRDM1 JASPAR yes 112469516
chr19 11692093 11692114 ZNF263 JASPAR yes 70804963
chr19 11692093 11692114 ZNF263 JASPAR yes 112469517
chr19 11692096 11692117 ZNF263 JASPAR yes 70804964
chr19 11692096 11692117 ZNF263 JASPAR yes 112469518
chr19 11692104 11692123 PAX5 JASPAR yes 70804965
chr19 11692104 11692123 PAX5 JASPAR yes 112469519
chr19 11692112 11692125 NR2F1 JASPAR yes 70804966
chr19 11692112 11692125 NR2F1 JASPAR yes 112469520
chr19 11692138 11692142 NFE TRANSFAC yes 70804967
chr19 11692138 11692142 NFE TRANSFAC yes 112469521
SNP sites on vista28636[chr19:11691804-11692141]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 11691809 rs79525531 G A no 5443436
chr19 11691837 rs72995045 C T
REST ZNF263
5443437
chr19 11691855 rs578100650 G A
MAFG ZNF263
5443438
chr19 11691888 rs74618482 C T no 5443439
chr19 11691908 rs75279637 A G no 5443440
chr19 11691931 rs531563136 A G
BATF E2F6 FOS FOSL1 JUN JUND ZNF263
5443441
chr19 11691979 rs72995047 A G
PKNOX1 PKNOX2 TGIF1 TGIF2
5443442
chr19 11692024 rs143879557 A G
CTCF H1TF2 NFE NFIC RFX5 SRF
5443443
chr19 11692063 rs541385873 A G
H1TF2 NFE SRF ZNF263
5443444
chr19 11692127 rs76506615 C G no 5443445
Genes possibly regulated by vista28636[chr19:11691804-11692141]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 11562141 11591861 - ELAVL3 ENSG00000196361.5 11591861 0.89 0.98 17044 57
chr19 11577055 11616513 - CTC-398G3.6 ENSG00000267477.1 11616513 0.99 1.0 17045 24709
chr19 11594242 11616738 - ZNF653 ENSG00000161914.5 11616738 0.6 1.0 17046 24934
chr19 11616731 11639989 - ECSIT ENSG00000130159.9 11639989 0.56 1.0 17047 48185
chr19 11649532 11661138 + CNN1 ENSG00000130176.3 11649532 0.93 0.97 17048 57728
chr19 11661962 11670051 - ELOF1 ENSG00000130165.6 11670051 0.75 0.99 17049 78247
chr19 11670189 11729950 + ZNF627 ENSG00000198551.5 11670189 0.8 0.99 17050 78385
chr19 11685475 11689823 - ACP5 ENSG00000102575.6 11689823 0.9 0.96 17051 98019
Expression level of Genes
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miRNAs possibly regulated by vista28636[chr19:11691804-11692141]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results