EnhancerDB
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  3. vista28645[chr19:12404552-12404928]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28645[chr19:12404552-12404928]
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Tissue distribution of vista28645
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Transcription factor that possibly regulate vista28645[chr19:12404552-12404928]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 12404367 12406146 POLR2A UCSC Txn Factor no Conserved 108385710
chr19 12404727 12405045 CEBPB UCSC Txn Factor no Conserved 108385758
chr19 12404552 12404570 ESR2 JASPAR yes 70805308
chr19 12404553 12404568 ESR2 JASPAR yes 70805309
chr19 12404571 12404577 NFIC JASPAR yes 70805310
chr19 12404573 12404577 H1TF2 TRANSFAC yes 70805311
chr19 12404573 12404577 NFE TRANSFAC yes 70805312
chr19 12404573 12404577 SRF TRANSFAC yes 70805313
chr19 12404598 12404604 HiNF-A TRANSFAC yes 70805314
chr19 12404631 12404646 HNF4A JASPAR yes 70805315
chr19 12404638 12404653 RUNX2 JASPAR yes 70805316
chr19 12404648 12404658 SP1 JASPAR yes 70805317
chr19 12404651 12404671 RREB1 JASPAR yes 70805318
chr19 12404653 12404673 RREB1 JASPAR yes 70805319
chr19 12404654 12404674 RREB1 JASPAR yes 70805320
chr19 12404703 12404708 MYC TRANSFAC yes 70805321
chr19 12404709 12404714 MYC TRANSFAC yes 70805322
chr19 12404740 12404753 SMAD2 JASPAR yes 70805323
chr19 12404771 12404783 HNF1B JASPAR yes 70805324
chr19 12404771 12404784 HNF1B JASPAR yes 70805325
chr19 12404780 12404783 MYB TRANSFAC yes 70805326
chr19 12404782 12404792 ID4 JASPAR yes 70805327
chr19 12404782 12404792 TCF4 JASPAR yes 70805328
chr19 12404788 12404800 TFAP2A JASPAR yes 70805329
chr19 12404788 12404803 NR2C2 JASPAR yes 70805330
chr19 12404809 12404819 GABPA JASPAR yes 70805331
chr19 12404809 12404820 ELK4 JASPAR yes 70805332
chr19 12404809 12404820 FLI1 JASPAR yes 70805333
chr19 12404835 12404839 ESR1 TRANSFAC yes 70805334
chr19 12404858 12404872 SPIC JASPAR yes 70805335
chr19 12404861 12404877 NFYA JASPAR yes 70805336
chr19 12404862 12404868 MZF1 JASPAR yes 70805337
chr19 12404864 12404879 NFYB JASPAR yes 70805338
chr19 12404869 12404884 TFAP2A JASPAR yes 70805339
chr19 12404869 12404884 TFAP2C JASPAR yes 70805340
chr19 12404874 12404879 TFAP2A TRANSFAC yes 70805341
chr19 12404874 12404880 MZF1 JASPAR yes 70805342
chr19 12404877 12404882 GATA2 JASPAR yes 70805343
SNP sites on vista28645[chr19:12404552-12404928]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 12404576 rs438963 A C
H1TF2 NFE NFIC POLR2A SRF
5445352
chr19 12404707 rs7258065 C G,T
MYC POLR2A
5445353
chr19 12404782 rs188124271 A C
CEBPB HNF1B ID4 MYB POLR2A TCF4
5445354
chr19 12404812 rs59305069 A G
CEBPB ELK4 FLI1 GABPA POLR2A
5445355
chr19 12404890 rs62111296 T C
CEBPB POLR2A
5445356
Genes possibly regulated by vista28645[chr19:12404552-12404928]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 12335501 12405702 - ZNF44 ENSG00000197857.9 12405702 0.87 0.98 17071 99226
chr19 12428291 12444534 - ZNF563 ENSG00000188868.9 12444534 0.68 0.97 17072 60394
chr19 12460185 12476719 - ZNF442 ENSG00000198342.5 12476719 0.74 0.9 17073 28209
Expression level of Genes
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miRNAs possibly regulated by vista28645[chr19:12404552-12404928]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results