EnhancerDB
  1. Home
  2. Enhancers
  3. vista28647[chr19:12724614-12724901]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28647[chr19:12724614-12724901]
Back to top
Tissue distribution of vista28647
Back to top
Transcription factor that possibly regulate vista28647[chr19:12724614-12724901]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 12724518 12724950 RUNX3 UCSC Txn Factor no Conserved 108385793
chr19 12724557 12724926 NFIC UCSC Txn Factor no Conserved 108385799
chr19 12724579 12724906 ATF2 UCSC Txn Factor no Conserved 108385802
chr19 12724608 12724895 SPI1 UCSC Txn Factor no Conserved 108385807
chr19 12724657 12724670 ZBTB18 JASPAR yes 70805444
chr19 12724657 12724670 ZBTB18 JASPAR yes 112489834
chr19 12724674 12724679 ETS2 TRANSFAC yes 70805445
chr19 12724674 12724679 ETS2 TRANSFAC yes 112489835
chr19 12724675 12724685 SP1 JASPAR yes 70805446
chr19 12724675 12724685 SP1 JASPAR yes 112489836
chr19 12724682 12724702 TP53 JASPAR yes 70805447
chr19 12724682 12724702 TP53 JASPAR yes 112489837
chr19 12724684 12724691 PEA3 TRANSFAC yes 70805448
chr19 12724684 12724691 PEA3 TRANSFAC yes 112489838
chr19 12724687 12724702 RUNX2 JASPAR yes 70805449
chr19 12724687 12724702 RUNX2 JASPAR yes 112489839
chr19 12724699 12724709 GSX2 JASPAR yes 70805450
chr19 12724699 12724709 GSX2 JASPAR yes 112489840
chr19 12724699 12724714 RUNX2 JASPAR yes 70805451
chr19 12724699 12724714 RUNX2 JASPAR yes 112489841
chr19 12724700 12724708 BARX1 JASPAR yes 70805452
chr19 12724700 12724708 BARX1 JASPAR yes 112489842
chr19 12724702 12724713 RUNX1 JASPAR yes 70805453
chr19 12724702 12724713 RUNX1 JASPAR yes 112489843
chr19 12724703 12724713 RUNX3 JASPAR yes 70805454
chr19 12724703 12724713 RUNX3 JASPAR yes 112489844
chr19 12724704 12724713 RUNX2 JASPAR yes 70805455
chr19 12724704 12724713 RUNX2 JASPAR yes 112489845
chr19 12724711 12724716 ETS2 TRANSFAC yes 70805456
chr19 12724711 12724716 ETS2 TRANSFAC yes 112489846
chr19 12724732 12724736 YY1 TRANSFAC yes 70805457
chr19 12724732 12724736 YY1 TRANSFAC yes 112489847
chr19 12724738 12724750 IRF1 JASPAR yes 70805458
chr19 12724738 12724750 IRF1 JASPAR yes 112489848
chr19 12724739 12724757 IRF2 JASPAR yes 70805459
chr19 12724739 12724757 IRF2 JASPAR yes 112489849
chr19 12724740 12724761 IRF1 JASPAR yes 70805460
chr19 12724740 12724761 IRF1 JASPAR yes 112489850
chr19 12724742 12724757 PRDM1 JASPAR yes 70805461
chr19 12724742 12724757 STAT2 JASPAR yes 70805462
chr19 12724742 12724757 PRDM1 JASPAR yes 112489851
chr19 12724742 12724757 STAT2 JASPAR yes 112489852
chr19 12724743 12724757 STAT1 JASPAR yes 70805463
chr19 12724743 12724757 STAT1 JASPAR yes 112489853
chr19 12724744 12724756 IRF1 JASPAR yes 70805464
chr19 12724744 12724756 IRF1 JASPAR yes 112489854
chr19 12724744 12724758 IRF7 JASPAR yes 70805465
chr19 12724744 12724758 IRF8 JASPAR yes 70805466
chr19 12724744 12724758 IRF7 JASPAR yes 112489855
chr19 12724744 12724758 IRF8 JASPAR yes 112489856
chr19 12724744 12724759 IRF9 JASPAR yes 70805467
chr19 12724744 12724759 IRF9 JASPAR yes 112489857
chr19 12724748 12724761 ELF3 JASPAR yes 70805468
chr19 12724748 12724761 ELF3 JASPAR yes 112489858
chr19 12724749 12724759 FEV JASPAR yes 70805469
chr19 12724749 12724759 FEV JASPAR yes 112489859
chr19 12724749 12724761 EHF JASPAR yes 70805470
chr19 12724749 12724761 ELF1 JASPAR yes 70805471
chr19 12724749 12724761 ELF4 JASPAR yes 70805472
chr19 12724749 12724761 EHF JASPAR yes 112489860
chr19 12724749 12724761 ELF1 JASPAR yes 112489861
chr19 12724749 12724761 ELF4 JASPAR yes 112489862
chr19 12724749 12724763 SPI1 JASPAR yes 70805473
chr19 12724749 12724763 SPI1 JASPAR yes 112489863
chr19 12724751 12724757 ETS1 JASPAR yes 70805474
chr19 12724751 12724757 SPI1 JASPAR yes 70805475
chr19 12724751 12724757 ETS1 JASPAR yes 112489864
chr19 12724751 12724757 SPI1 JASPAR yes 112489865
chr19 12724775 12724785 ESX1 JASPAR yes 70805476
chr19 12724775 12724785 GBX1 JASPAR yes 70805477
chr19 12724775 12724785 GSX1 JASPAR yes 70805478
chr19 12724775 12724785 GSX2 JASPAR yes 70805479
chr19 12724775 12724785 ESX1 JASPAR yes 112489866
chr19 12724775 12724785 GBX1 JASPAR yes 112489867
chr19 12724775 12724785 GSX1 JASPAR yes 112489868
chr19 12724775 12724785 GSX2 JASPAR yes 112489869
chr19 12724776 12724784 BSX JASPAR yes 70805480
chr19 12724776 12724784 DLX6 JASPAR yes 70805481
chr19 12724776 12724784 MSX1 JASPAR yes 70805482
chr19 12724776 12724784 MSX2 JASPAR yes 70805483
chr19 12724776 12724784 BSX JASPAR yes 112489870
chr19 12724776 12724784 DLX6 JASPAR yes 112489871
chr19 12724776 12724784 MSX1 JASPAR yes 112489872
chr19 12724776 12724784 MSX2 JASPAR yes 112489873
chr19 12724784 12724799 FOXA1 JASPAR yes 70805484
chr19 12724784 12724799 FOXA1 JASPAR yes 112489874
chr19 12724787 12724798 FOXB1 JASPAR yes 70805485
chr19 12724787 12724798 FOXB1 JASPAR yes 112489875
chr19 12724790 12724797 MEIS1 JASPAR yes 70805486
chr19 12724790 12724797 MEIS1 JASPAR yes 112489876
chr19 12724802 12724812 RORA JASPAR yes 70805487
chr19 12724802 12724812 RORA JASPAR yes 112489877
chr19 12724803 12724814 ESRRA JASPAR yes 70805488
chr19 12724803 12724814 ESRRB JASPAR yes 70805489
chr19 12724803 12724814 ESRRA JASPAR yes 112489878
chr19 12724803 12724814 ESRRB JASPAR yes 112489879
chr19 12724805 12724813 NR4A2 JASPAR yes 70805490
chr19 12724805 12724813 NR4A2 JASPAR yes 112489880
chr19 12724807 12724811 ESR1 TRANSFAC yes 70805491
chr19 12724807 12724811 ESR1 TRANSFAC yes 112489881
chr19 12724812 12724824 BHLHE23 JASPAR yes 70805492
chr19 12724812 12724824 BHLHE23 JASPAR yes 112489882
chr19 12724813 12724823 NEUROG2 JASPAR yes 70805493
chr19 12724813 12724823 NEUROG2 JASPAR yes 112489883
chr19 12724821 12724832 STAT1 JASPAR yes 70805494
chr19 12724821 12724832 STAT1 JASPAR yes 112489884
chr19 12724846 12724851 TFAP2A TRANSFAC yes 70805495
chr19 12724846 12724851 TFAP2A TRANSFAC yes 112489885
chr19 12724846 12724852 MZF1 JASPAR yes 70805496
chr19 12724846 12724852 MZF1 JASPAR yes 112489886
chr19 12724853 12724866 POU2F2 JASPAR yes 70805497
chr19 12724853 12724866 POU2F2 JASPAR yes 112489887
chr19 12724853 12724867 POU1F1 JASPAR yes 70805498
chr19 12724853 12724867 POU1F1 JASPAR yes 112489888
chr19 12724854 12724866 POU3F1 JASPAR yes 70805499
chr19 12724854 12724866 POU3F2 JASPAR yes 70805500
chr19 12724854 12724866 POU3F1 JASPAR yes 112489889
chr19 12724854 12724866 POU3F2 JASPAR yes 112489890
chr19 12724854 12724867 POU3F3 JASPAR yes 70805501
chr19 12724854 12724867 POU3F3 JASPAR yes 112489891
chr19 12724855 12724859 YY1 TRANSFAC yes 70805502
chr19 12724855 12724859 YY1 TRANSFAC yes 112489892
chr19 12724855 12724867 POU2F1 JASPAR yes 70805503
chr19 12724855 12724867 POU2F1 JASPAR yes 112489893
chr19 12724856 12724863 POU2F1 TRANSFAC yes 70805504
chr19 12724856 12724863 POU2F2C TRANSFAC yes 70805505
chr19 12724856 12724863 POU2F2 TRANSFAC yes 70805506
chr19 12724856 12724863 POU2F1 TRANSFAC yes 112489894
chr19 12724856 12724863 POU2F2C TRANSFAC yes 112489895
chr19 12724856 12724863 POU2F2 TRANSFAC yes 112489896
chr19 12724856 12724865 POU5F1B JASPAR yes 70805507
chr19 12724856 12724865 POU5F1B JASPAR yes 112489897
chr19 12724893 12724911 SRF JASPAR yes 70805508
chr19 12724893 12724911 SRF JASPAR yes 112489898
SNP sites on vista28647[chr19:12724614-12724901]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 12724634 rs73499419 G A
ATF2 NFIC RUNX3 SPI1
5446081
chr19 12724645 rs983149 A G
ATF2 NFIC RUNX3 SPI1
5446082
chr19 12724765 rs138484729 G T
ATF2 NFIC RUNX3 SPI1
5446083
chr19 12724770 rs57345539 A T
ATF2 NFIC RUNX3 SPI1
5446084
Genes possibly regulated by vista28647[chr19:12724614-12724901]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 12571998 12624668 - ZNF709 ENSG00000242852.2 12624668 0.78 0.84 17079 54
chr19 12572373 12662288 - ZNF709 ENSG00000196826.7 12662288 0.91 0.78 17080 37674
chr19 12636184 12662356 - ZNF564 ENSG00000249709.3 12662356 0.63 0.76 17081 37742
chr19 12636534 12691789 - CTD-2192J16.20 ENSG00000269693.1 12691789 0.84 0.99 17082 67175
chr19 12688775 12750912 - ZNF490 ENSG00000188033.5 12750912 0.76 0.98 17083 73989
chr19 12721732 12742735 + ZNF791 ENSG00000173875.9 12721732 0.66 0.99 17084 97118
chr19 12754645 12759211 - CTD-2192J16.22 ENSG00000269242.1 12759211 0.83 0.75 17085 65690
chr19 12757325 12777556 - MAN2B1 ENSG00000104774.8 12777556 0.72 1.0 17086 47345
chr19 12775642 12780211 - CTD-2192J16.24 ENSG00000269590.1 12780211 0.97 0.93 17087 44690
chr19 12777614 12786646 + WDR83 ENSG00000123154.7 12777614 0.64 1.0 17088 47287
chr19 12778885 12782170 - WDR83OS ENSG00000105583.5 12782170 0.66 0.99 17089 42731
chr19 12786531 12792716 - DHPS ENSG00000095059.11 12792716 0.54 1.0 17090 32185
chr19 12798867 12807457 - FBXW9 ENSG00000132004.8 12807457 0.7 1.0 17091 17444
Expression level of Genes
Back to top
miRNAs possibly regulated by vista28647[chr19:12724614-12724901]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results