EnhancerDB
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  3. vista28651[chr19:12890492-12890682]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28651[chr19:12890492-12890682]
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Tissue distribution of vista28651
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Transcription factor that possibly regulate vista28651[chr19:12890492-12890682]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 12890486 12890496 TBX21 JASPAR yes 70805715
chr19 12890486 12890496 TBX21 JASPAR yes 112493001
chr19 12890486 12890497 TBX20 JASPAR yes 70805716
chr19 12890486 12890497 TBX2 JASPAR yes 70805717
chr19 12890486 12890497 TBX20 JASPAR yes 112493002
chr19 12890486 12890497 TBX2 JASPAR yes 112493003
chr19 12890486 12890499 EOMES JASPAR yes 70805718
chr19 12890486 12890499 EOMES JASPAR yes 112493004
chr19 12890487 12890495 MGA JASPAR yes 70805719
chr19 12890487 12890495 TBX15 JASPAR yes 70805720
chr19 12890487 12890495 TBX1 JASPAR yes 70805721
chr19 12890487 12890495 TBX4 JASPAR yes 70805722
chr19 12890487 12890495 TBX5 JASPAR yes 70805723
chr19 12890487 12890495 MGA JASPAR yes 112493005
chr19 12890487 12890495 TBX15 JASPAR yes 112493006
chr19 12890487 12890495 TBX1 JASPAR yes 112493007
chr19 12890487 12890495 TBX4 JASPAR yes 112493008
chr19 12890487 12890495 TBX5 JASPAR yes 112493009
chr19 12890487 12890497 TBR1 JASPAR yes 70805724
chr19 12890487 12890497 TBR1 JASPAR yes 112493010
chr19 12890523 12890527 LFA1 TRANSFAC yes 70805725
chr19 12890523 12890527 LFA1 TRANSFAC yes 112493011
chr19 12890523 12890535 HES5 JASPAR yes 70805726
chr19 12890523 12890535 HES5 JASPAR yes 112493012
chr19 12890524 12890535 USF1 JASPAR yes 70805727
chr19 12890524 12890535 USF1 JASPAR yes 112493013
chr19 12890567 12890580 SCRT2 JASPAR yes 70805728
chr19 12890567 12890580 SCRT2 JASPAR yes 112493014
chr19 12890567 12890582 SCRT1 JASPAR yes 70805729
chr19 12890567 12890582 SCRT1 JASPAR yes 112493015
chr19 12890570 12890585 AR JASPAR yes 70805730
chr19 12890570 12890585 AR JASPAR yes 112493016
chr19 12890591 12890601 ZNF740 JASPAR yes 70805731
chr19 12890591 12890601 ZNF740 JASPAR yes 112493017
chr19 12890594 12890604 SP1 JASPAR yes 70805732
chr19 12890594 12890604 SP1 JASPAR yes 112493018
chr19 12890595 12890605 SP1 JASPAR yes 70805733
chr19 12890595 12890605 SP1 JASPAR yes 112493019
chr19 12890597 12890603 MAZ TRANSFAC yes 70805734
chr19 12890597 12890603 MAZ TRANSFAC yes 112493020
chr19 12890612 12890622 SP1 JASPAR yes 70805735
chr19 12890612 12890622 SP1 JASPAR yes 112493021
chr19 12890619 12890628 SP1 TRANSFAC yes 70805736
chr19 12890619 12890628 SP1 TRANSFAC yes 112493022
chr19 12890619 12890629 SP1 JASPAR yes 70805737
chr19 12890619 12890629 SP1 JASPAR yes 112493023
chr19 12890620 12890629 SP1 TRANSFAC yes 70805738
chr19 12890620 12890629 SP1 TRANSFAC yes 112493024
chr19 12890621 12890627 MAZ TRANSFAC yes 70805739
chr19 12890621 12890627 MAZ TRANSFAC yes 112493025
chr19 12890622 12890632 MZF1 JASPAR yes 70805740
chr19 12890622 12890632 MZF1 JASPAR yes 112493026
chr19 12890636 12890639 MYB TRANSFAC yes 70805741
chr19 12890636 12890639 MYB TRANSFAC yes 112493027
chr19 12890651 12890654 MYB TRANSFAC yes 70805742
chr19 12890651 12890654 MYB TRANSFAC yes 112493028
chr19 12890666 12890669 MYB TRANSFAC yes 70805743
chr19 12890666 12890669 MYB TRANSFAC yes 112493029
chr19 12890679 12890684 SP1 TRANSFAC yes 70805744
chr19 12890679 12890684 SP1 TRANSFAC yes 112493030
chr19 12890679 12890686 SP1 TRANSFAC yes 70805745
chr19 12890679 12890686 SP1 TRANSFAC yes 112493031
chr19 12890679 12890688 SP1 TRANSFAC yes 70805746
chr19 12890679 12890688 SP1 TRANSFAC yes 112493032
SNP sites on vista28651[chr19:12890492-12890682]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 12890504 rs539098296 A C no 5446745
chr19 12890557 rs368552619 C A no 5446746
chr19 12890595 rs79814575 G C
SP1 ZNF740
5446747
chr19 12890665 rs115793112 C T no 5446748
Genes possibly regulated by vista28651[chr19:12890492-12890682]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 12786531 12792716 - DHPS ENSG00000095059.11 12792716 0.54 1.0 17090 2224
chr19 12798867 12807457 - FBXW9 ENSG00000132004.8 12807457 0.7 1.0 17091 16965
chr19 12810008 12834825 - TNPO2 ENSG00000105576.11 12834825 0.68 1.0 17092 44333
chr19 12841454 12845589 - C19orf43 ENSG00000123144.6 12845589 0.53 0.99 17093 55097
chr19 12847953 12859137 + ASNA1 ENSG00000198356.7 12847953 0.61 0.99 17094 57461
chr19 12862516 12869272 + BEST2 ENSG00000039987.2 12862516 1.0 0.99 17095 72024
chr19 12873817 12983554 - HOOK2 ENSG00000095066.7 12983554 0.8 1.0 17096 7128
chr19 12902310 12904124 + JUNB ENSG00000171223.4 12902310 0.87 1.0 17097 88372
chr19 12907634 12912694 - PRDX2 ENSG00000167815.7 12912694 0.59 1.0 17098 77988
chr19 12917394 12924452 + RNASEH2A ENSG00000104889.4 12917394 0.86 0.99 17099 73288
chr19 12936292 12946242 - RTBDN ENSG00000132026.9 12946242 0.99 1.0 17100 44440
chr19 12944765 12985765 + MAST1 ENSG00000105613.5 12944765 0.78 1.0 17101 45917
Expression level of Genes
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miRNAs possibly regulated by vista28651[chr19:12890492-12890682]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results