EnhancerDB
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  3. vista28657[chr19:12896870-12897372]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28657[chr19:12896870-12897372]
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Tissue distribution of vista28657
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Transcription factor that possibly regulate vista28657[chr19:12896870-12897372]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 12897280 12897628 E2F1 UCSC Txn Factor no Conserved 108386449
chr19 12897369 12897635 NR3C1 UCSC Txn Factor no Conserved 108386453
chr19 12896861 12896882 IRF1 JASPAR yes 70806250
chr19 12896861 12896882 IRF1 JASPAR yes 112493936
chr19 12896865 12896880 PRDM1 JASPAR yes 70806251
chr19 12896865 12896880 PRDM1 JASPAR yes 112493937
chr19 12896867 12896888 IRF1 JASPAR yes 70806252
chr19 12896867 12896888 IRF1 JASPAR yes 112493938
chr19 12896874 12896887 SMAD2 JASPAR yes 70806253
chr19 12896874 12896887 SMAD2 JASPAR yes 112493939
chr19 12896886 12896897 FLI1 JASPAR yes 70806254
chr19 12896886 12896897 FLI1 JASPAR yes 112493940
chr19 12896886 12896899 ELF3 JASPAR yes 70806255
chr19 12896886 12896899 ELF3 JASPAR yes 112493941
chr19 12896887 12896900 ELF1 JASPAR yes 70806256
chr19 12896887 12896900 ELF1 JASPAR yes 112493942
chr19 12896888 12896896 EHF JASPAR yes 70806257
chr19 12896888 12896896 EHF JASPAR yes 112493943
chr19 12896890 12896909 RFX2 JASPAR yes 70806258
chr19 12896890 12896909 RFX2 JASPAR yes 112493944
chr19 12896894 12896909 STAT1 JASPAR yes 70806259
chr19 12896894 12896909 STAT1 JASPAR yes 112493945
chr19 12896896 12896907 STAT1 JASPAR yes 70806260
chr19 12896896 12896907 STAT3 JASPAR yes 70806261
chr19 12896896 12896907 STAT1 JASPAR yes 112493946
chr19 12896896 12896907 STAT3 JASPAR yes 112493947
chr19 12896913 12896924 FLI1 JASPAR yes 70806262
chr19 12896913 12896924 FLI1 JASPAR yes 112493948
chr19 12896917 12896924 SPIB JASPAR yes 70806263
chr19 12896917 12896924 SPIB JASPAR yes 112493949
chr19 12896921 12896940 CTCF JASPAR yes 70806264
chr19 12896921 12896940 CTCF JASPAR yes 112493950
chr19 12896927 12896937 SP1 JASPAR yes 70806265
chr19 12896927 12896937 SP1 JASPAR yes 112493951
chr19 12896931 12896946 HNF4G JASPAR yes 70806266
chr19 12896931 12896946 HNF4G JASPAR yes 112493952
chr19 12896934 12896938 LFA1 TRANSFAC yes 70806267
chr19 12896934 12896938 LFA1 TRANSFAC yes 112493953
chr19 12896940 12896952 ZBTB7B JASPAR yes 70806268
chr19 12896940 12896952 ZBTB7C JASPAR yes 70806269
chr19 12896940 12896952 ZBTB7B JASPAR yes 112493954
chr19 12896940 12896952 ZBTB7C JASPAR yes 112493955
chr19 12896948 12896963 RUNX2 JASPAR yes 70806270
chr19 12896948 12896963 RUNX2 JASPAR yes 112493956
chr19 12896949 12896958 RUNX2 JASPAR yes 70806271
chr19 12896949 12896958 RUNX2 JASPAR yes 112493957
chr19 12896949 12896959 RUNX3 JASPAR yes 70806272
chr19 12896949 12896959 RUNX3 JASPAR yes 112493958
chr19 12896949 12896960 RUNX1 JASPAR yes 70806273
chr19 12896949 12896960 RUNX1 JASPAR yes 112493959
chr19 12896956 12896977 ZNF263 JASPAR yes 70806274
chr19 12896956 12896977 ZNF263 JASPAR yes 112493960
chr19 12896958 12896966 TBX15 JASPAR yes 70806275
chr19 12896958 12896966 TBX15 JASPAR yes 112493961
chr19 12896958 12896969 E2F6 JASPAR yes 70806276
chr19 12896958 12896969 E2F6 JASPAR yes 112493962
chr19 12896959 12896964 SP1 TRANSFAC yes 70806277
chr19 12896959 12896964 SP1 TRANSFAC yes 112493963
chr19 12896964 12896975 E2F6 JASPAR yes 70806278
chr19 12896964 12896975 E2F6 JASPAR yes 112493964
chr19 12896971 12896976 SP1 TRANSFAC yes 70806279
chr19 12896971 12896976 SP1 TRANSFAC yes 112493965
chr19 12896988 12897003 RFX5 JASPAR yes 70806280
chr19 12896988 12897003 RFX5 JASPAR yes 112493966
chr19 12896992 12897004 INSM1 JASPAR yes 70806281
chr19 12896992 12897004 INSM1 JASPAR yes 112493967
chr19 12896997 12897007 SP1 JASPAR yes 70806282
chr19 12896997 12897007 SP1 JASPAR yes 112493968
chr19 12896999 12897005 MAZ TRANSFAC yes 70806283
chr19 12896999 12897005 MAZ TRANSFAC yes 112493969
chr19 12897019 12897038 REST JASPAR yes 70806284
chr19 12897019 12897038 REST JASPAR yes 112493970
chr19 12897023 12897029 ZNF354C JASPAR yes 70806285
chr19 12897023 12897029 ZNF354C JASPAR yes 112493971
chr19 12897034 12897044 SP1 JASPAR yes 70806286
chr19 12897034 12897044 SP1 JASPAR yes 112493972
chr19 12897034 12897055 ZNF263 JASPAR yes 70806287
chr19 12897034 12897055 ZNF263 JASPAR yes 112493973
chr19 12897035 12897039 LFA1 TRANSFAC yes 70806288
chr19 12897035 12897039 LFA1 TRANSFAC yes 112493974
chr19 12897047 12897053 MAZ TRANSFAC yes 70806289
chr19 12897047 12897053 MAZ TRANSFAC yes 112493975
chr19 12897047 12897058 E2F6 JASPAR yes 70806290
chr19 12897047 12897058 E2F6 JASPAR yes 112493976
chr19 12897052 12897062 SP1 JASPAR yes 70806291
chr19 12897052 12897062 SP1 JASPAR yes 112493977
chr19 12897053 12897063 SP1 JASPAR yes 70806292
chr19 12897053 12897063 SP1 JASPAR yes 112493978
chr19 12897061 12897075 MTF1 JASPAR yes 70806293
chr19 12897061 12897075 MTF1 JASPAR yes 112493979
chr19 12897073 12897088 RUNX2 JASPAR yes 70806294
chr19 12897073 12897088 RUNX2 JASPAR yes 112493980
chr19 12897077 12897087 RUNX3 JASPAR yes 70806295
chr19 12897077 12897087 RUNX3 JASPAR yes 112493981
chr19 12897084 12897104 TP63 JASPAR yes 70806296
chr19 12897084 12897104 TP63 JASPAR yes 112493982
chr19 12897104 12897118 JUN JASPAR yes 70806297
chr19 12897104 12897118 JUN JASPAR yes 112493983
chr19 12897106 12897117 BATF JASPAR yes 70806298
chr19 12897106 12897117 BATF JASPAR yes 112493984
chr19 12897107 12897118 FOSL2 JASPAR yes 70806299
chr19 12897107 12897118 JUNB JASPAR yes 70806300
chr19 12897107 12897118 NFE2L2 JASPAR yes 70806301
chr19 12897107 12897118 FOSL2 JASPAR yes 112493985
chr19 12897107 12897118 JUNB JASPAR yes 112493986
chr19 12897107 12897118 NFE2L2 JASPAR yes 112493987
chr19 12897108 12897119 FOS JASPAR yes 70806302
chr19 12897108 12897119 FOSL1 JASPAR yes 70806303
chr19 12897108 12897119 JUND JASPAR yes 70806304
chr19 12897108 12897119 FOS JASPAR yes 112493988
chr19 12897108 12897119 FOSL1 JASPAR yes 112493989
chr19 12897108 12897119 JUND JASPAR yes 112493990
chr19 12897109 12897120 FOSL2 JASPAR yes 70806305
chr19 12897109 12897120 JUNB JASPAR yes 70806306
chr19 12897109 12897120 FOSL2 JASPAR yes 112493991
chr19 12897109 12897120 JUNB JASPAR yes 112493992
chr19 12897120 12897139 REST JASPAR yes 70806307
chr19 12897120 12897139 REST JASPAR yes 112493993
chr19 12897122 12897134 INSM1 JASPAR yes 70806308
chr19 12897122 12897134 INSM1 JASPAR yes 112493994
chr19 12897157 12897161 ESR1 TRANSFAC yes 70806309
chr19 12897157 12897161 ESR1 TRANSFAC yes 112493995
chr19 12897164 12897169 SP1 TRANSFAC yes 70806310
chr19 12897164 12897169 SP1 TRANSFAC yes 112493996
chr19 12897164 12897178 PLAG1 JASPAR yes 70806311
chr19 12897164 12897178 PLAG1 JASPAR yes 112493997
chr19 12897174 12897180 MAZ TRANSFAC yes 70806312
chr19 12897174 12897180 MAZ TRANSFAC yes 112493998
chr19 12897174 12897184 SP1 JASPAR yes 70806313
chr19 12897174 12897184 SP1 JASPAR yes 112493999
chr19 12897177 12897190 NFKB1 JASPAR yes 70806314
chr19 12897177 12897190 NFKB1 JASPAR yes 112494000
chr19 12897178 12897191 NR2F1 JASPAR yes 70806315
chr19 12897178 12897191 NR2F1 JASPAR yes 112494001
chr19 12897181 12897196 ESR2 JASPAR yes 70806316
chr19 12897181 12897196 ESR2 JASPAR yes 112494002
chr19 12897182 12897186 ESR1 TRANSFAC yes 70806317
chr19 12897182 12897186 ESR1 TRANSFAC yes 112494003
chr19 12897189 12897204 MEF2A JASPAR yes 70806318
chr19 12897189 12897204 MEF2A JASPAR yes 112494004
chr19 12897190 12897205 MEF2C JASPAR yes 70806319
chr19 12897190 12897205 MEF2C JASPAR yes 112494005
chr19 12897191 12897203 MEF2A JASPAR yes 70806320
chr19 12897191 12897203 MEF2B JASPAR yes 70806321
chr19 12897191 12897203 MEF2D JASPAR yes 70806322
chr19 12897191 12897203 MEF2A JASPAR yes 112494006
chr19 12897191 12897203 MEF2B JASPAR yes 112494007
chr19 12897191 12897203 MEF2D JASPAR yes 112494008
chr19 12897192 12897202 MEF2A JASPAR yes 70806323
chr19 12897192 12897202 MEF2A JASPAR yes 112494009
chr19 12897193 12897197 YY1 TRANSFAC yes 70806324
chr19 12897193 12897197 YY1 TRANSFAC yes 112494010
chr19 12897197 12897201 TEAD2 TRANSFAC yes 70806325
chr19 12897197 12897201 TEAD2 TRANSFAC yes 112494011
chr19 12897200 12897214 SPI1 JASPAR yes 70806326
chr19 12897200 12897214 SPI1 JASPAR yes 112494012
chr19 12897205 12897216 NFKB1 JASPAR yes 70806327
chr19 12897205 12897216 NFKB1 JASPAR yes 112494013
chr19 12897206 12897216 NFKB1 JASPAR yes 70806328
chr19 12897206 12897216 NFKB1 JASPAR yes 112494014
chr19 12897217 12897226 NFIX JASPAR yes 70806329
chr19 12897217 12897226 NFIX JASPAR yes 112494015
chr19 12897217 12897227 NFIA JASPAR yes 70806330
chr19 12897217 12897227 NFIA JASPAR yes 112494016
chr19 12897219 12897225 NFIC JASPAR yes 70806331
chr19 12897219 12897225 NFIC JASPAR yes 112494017
chr19 12897223 12897238 RUNX2 JASPAR yes 70806332
chr19 12897223 12897238 RUNX2 JASPAR yes 112494018
chr19 12897240 12897255 SCRT1 JASPAR yes 70806333
chr19 12897240 12897255 SCRT1 JASPAR yes 112494019
chr19 12897244 12897264 RREB1 JASPAR yes 70806334
chr19 12897244 12897264 RREB1 JASPAR yes 112494020
chr19 12897245 12897265 RREB1 JASPAR yes 70806335
chr19 12897245 12897265 RREB1 JASPAR yes 112494021
chr19 12897248 12897258 SP1 JASPAR yes 70806336
chr19 12897248 12897258 SP1 JASPAR yes 112494022
chr19 12897251 12897256 SP1 TRANSFAC yes 70806337
chr19 12897251 12897256 SP1 TRANSFAC yes 112494023
chr19 12897252 12897262 ZNF740 JASPAR yes 70806338
chr19 12897252 12897262 ZNF740 JASPAR yes 112494024
chr19 12897254 12897264 SP1 JASPAR yes 70806339
chr19 12897254 12897264 SP1 JASPAR yes 112494025
chr19 12897257 12897262 SP1 TRANSFAC yes 70806340
chr19 12897257 12897262 SP1 TRANSFAC yes 112494026
chr19 12897264 12897277 ELF3 JASPAR yes 70806341
chr19 12897264 12897277 ELF3 JASPAR yes 112494027
chr19 12897265 12897275 ETV6 JASPAR yes 70806342
chr19 12897265 12897275 ETV6 JASPAR yes 112494028
chr19 12897265 12897276 ELF5 JASPAR yes 70806343
chr19 12897265 12897276 ELF5 JASPAR yes 112494029
chr19 12897265 12897277 EHF JASPAR yes 70806344
chr19 12897265 12897277 EHF JASPAR yes 112494030
chr19 12897265 12897278 ELF1 JASPAR yes 70806345
chr19 12897265 12897278 ELF1 JASPAR yes 112494031
chr19 12897265 12897279 SPI1 JASPAR yes 70806346
chr19 12897265 12897279 SPI1 JASPAR yes 112494032
chr19 12897266 12897273 SPI1 JASPAR yes 70806347
chr19 12897266 12897273 SPI1 JASPAR yes 112494033
chr19 12897266 12897274 EHF JASPAR yes 70806348
chr19 12897266 12897274 EHF JASPAR yes 112494034
chr19 12897276 12897281 GATA2 JASPAR yes 70806349
chr19 12897276 12897281 GATA2 JASPAR yes 112494035
chr19 12897280 12897295 TFAP2A JASPAR yes 70806350
chr19 12897280 12897295 TFAP2A JASPAR yes 112494036
chr19 12897283 12897295 TFAP2A JASPAR yes 70806351
chr19 12897283 12897295 TFAP2A JASPAR yes 112494037
chr19 12897284 12897293 TFAP2A JASPAR yes 70806352
chr19 12897284 12897293 TFAP2A JASPAR yes 112494038
chr19 12897287 12897302 TFAP2A JASPAR yes 70806353
chr19 12897287 12897302 TFAP2C JASPAR yes 70806354
chr19 12897287 12897302 TFAP2A JASPAR yes 112494039
chr19 12897287 12897302 TFAP2C JASPAR yes 112494040
chr19 12897289 12897301 INSM1 JASPAR yes 70806355
chr19 12897289 12897301 INSM1 JASPAR yes 112494041
chr19 12897289 12897304 TFAP2A JASPAR yes 70806356
chr19 12897289 12897304 TFAP2A JASPAR yes 112494042
chr19 12897290 12897301 TFAP2A JASPAR yes 70806357
chr19 12897290 12897301 TFAP2A JASPAR yes 112494043
chr19 12897291 12897300 TFAP2A JASPAR yes 70806358
chr19 12897291 12897300 TFAP2A JASPAR yes 112494044
chr19 12897294 12897309 TFAP2A JASPAR yes 70806359
chr19 12897294 12897309 TFAP2A JASPAR yes 112494045
chr19 12897297 12897309 TFAP2A JASPAR yes 70806360
chr19 12897297 12897309 TFAP2B JASPAR yes 70806361
chr19 12897297 12897309 TFAP2C JASPAR yes 70806362
chr19 12897297 12897309 TFAP2A JASPAR yes 112494046
chr19 12897297 12897309 TFAP2B JASPAR yes 112494047
chr19 12897297 12897309 TFAP2C JASPAR yes 112494048
chr19 12897297 12897312 TFAP2A JASPAR yes 70806363
chr19 12897297 12897312 TFAP2C JASPAR yes 70806364
chr19 12897297 12897312 TFAP2A JASPAR yes 112494049
chr19 12897297 12897312 TFAP2C JASPAR yes 112494050
chr19 12897298 12897307 TFAP2A JASPAR yes 70806365
chr19 12897298 12897307 TFAP2A JASPAR yes 112494051
chr19 12897299 12897308 TFAP2A JASPAR yes 70806366
chr19 12897299 12897308 TFAP2A JASPAR yes 112494052
chr19 12897304 12897308 LFA1 TRANSFAC yes 70806367
chr19 12897304 12897308 LFA1 TRANSFAC yes 112494053
chr19 12897310 12897315 TFAP2A TRANSFAC yes 70806368
chr19 12897310 12897315 TFAP2A TRANSFAC yes 112494054
chr19 12897310 12897316 MZF1 JASPAR yes 70806369
chr19 12897310 12897316 MZF1 JASPAR yes 112494055
chr19 12897312 12897317 ETS2 TRANSFAC yes 70806370
chr19 12897312 12897317 ETS2 TRANSFAC yes 112494056
chr19 12897315 12897326 NRF1 JASPAR yes 70806371
chr19 12897315 12897326 NRF1 JASPAR yes 112494057
chr19 12897337 12897347 ID4 JASPAR yes 70806372
chr19 12897337 12897347 TCF3 JASPAR yes 70806373
chr19 12897337 12897347 TCF4 JASPAR yes 70806374
chr19 12897337 12897347 ID4 JASPAR yes 112494058
chr19 12897337 12897347 TCF3 JASPAR yes 112494059
chr19 12897337 12897347 TCF4 JASPAR yes 112494060
chr19 12897355 12897364 TFAP2A JASPAR yes 70806375
chr19 12897355 12897364 TFAP2A JASPAR yes 112494061
chr19 12897366 12897370 LFA1 TRANSFAC yes 70806376
chr19 12897366 12897370 LFA1 TRANSFAC yes 112494062
SNP sites on vista28657[chr19:12896870-12897372]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 12896928 rs10414267 G A
CTCF SP1
5446824
chr19 12897105 rs188381951 A G
JUN
5446825
chr19 12897150 rs77010274 G A no 5446826
chr19 12897322 rs73503421 G A
E2F1 NRF1
5446827
chr19 12897324 rs530774854 G T
E2F1 NRF1
5446828
Genes possibly regulated by vista28657[chr19:12896870-12897372]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 12798867 12807457 - FBXW9 ENSG00000132004.8 12807457 0.7 1.0 17091 10587
chr19 12810008 12834825 - TNPO2 ENSG00000105576.11 12834825 0.68 1.0 17092 37955
chr19 12841454 12845589 - C19orf43 ENSG00000123144.6 12845589 0.53 0.99 17093 48719
chr19 12847953 12859137 + ASNA1 ENSG00000198356.7 12847953 0.61 0.99 17094 51083
chr19 12862516 12869272 + BEST2 ENSG00000039987.2 12862516 1.0 0.99 17095 65646
chr19 12873817 12983554 - HOOK2 ENSG00000095066.7 12983554 0.8 1.0 17096 13818
chr19 12902310 12904124 + JUNB ENSG00000171223.4 12902310 0.87 1.0 17097 95062
chr19 12907634 12912694 - PRDX2 ENSG00000167815.7 12912694 0.59 1.0 17098 84678
chr19 12917394 12924452 + RNASEH2A ENSG00000104889.4 12917394 0.86 0.99 17099 79978
chr19 12936292 12946242 - RTBDN ENSG00000132026.9 12946242 0.99 1.0 17100 51130
chr19 12944765 12985765 + MAST1 ENSG00000105613.5 12944765 0.78 1.0 17101 52607
chr19 12986025 12992282 - DNASE2 ENSG00000105612.4 12992282 0.64 1.0 17102 5090
Expression level of Genes
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miRNAs possibly regulated by vista28657[chr19:12896870-12897372]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results