EnhancerDB
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  3. vista28659[chr19:12901644-12901726]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28659[chr19:12901644-12901726]
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Tissue distribution of vista28659
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Transcription factor that possibly regulate vista28659[chr19:12901644-12901726]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 12899245 12906365 POLR2A UCSC Txn Factor no Conserved 108386458
chr19 12899245 12906365 POLR2A UCSC Txn Factor no Conserved 108386459
chr19 12901682 12901686 YY1 TRANSFAC yes 70806716
chr19 12901682 12901686 YY1 TRANSFAC yes 112494420
chr19 12901693 12901703 HOXB13 JASPAR yes 70806717
chr19 12901693 12901703 HOXD13 JASPAR yes 70806718
chr19 12901693 12901703 HOXB13 JASPAR yes 112494421
chr19 12901693 12901703 HOXD13 JASPAR yes 112494422
chr19 12901694 12901704 GSX2 JASPAR yes 70806719
chr19 12901694 12901704 GSX2 JASPAR yes 112494423
chr19 12901695 12901703 BSX JASPAR yes 70806720
chr19 12901695 12901703 BSX JASPAR yes 112494424
chr19 12901695 12901704 VENTX JASPAR yes 70806721
chr19 12901695 12901704 VENTX JASPAR yes 112494425
chr19 12901697 12901708 NFE2 JASPAR yes 70806722
chr19 12901697 12901708 NFE2 JASPAR yes 112494426
chr19 12901697 12901717 PPARG JASPAR yes 70806723
chr19 12901697 12901717 PPARG JASPAR yes 112494427
chr19 12901699 12901705 ESR1 TRANSFAC yes 70806724
chr19 12901699 12901705 ESR1 TRANSFAC yes 112494428
chr19 12901700 12901715 ESR2 JASPAR yes 70806725
chr19 12901700 12901715 ESR2 JASPAR yes 112494429
chr19 12901701 12901705 ESR1 TRANSFAC yes 70806726
chr19 12901701 12901705 ESR1 TRANSFAC yes 112494430
chr19 12901714 12901734 RREB1 JASPAR yes 70806727
chr19 12901714 12901734 RREB1 JASPAR yes 112494431
chr19 12901724 12901739 LEF1 JASPAR yes 70806728
chr19 12901724 12901739 LEF1 JASPAR yes 112494432
chr19 12901725 12901739 TCF7L2 JASPAR yes 70806729
chr19 12901725 12901739 TCF7L2 JASPAR yes 112494433
SNP sites on vista28659[chr19:12901644-12901726]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 12901680 rs137914046 A G,T
POLR2A
5446871
Genes possibly regulated by vista28659[chr19:12901644-12901726]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 12798867 12807457 - FBXW9 ENSG00000132004.8 12807457 0.7 1.0 17091 5813
chr19 12810008 12834825 - TNPO2 ENSG00000105576.11 12834825 0.68 1.0 17092 33181
chr19 12841454 12845589 - C19orf43 ENSG00000123144.6 12845589 0.53 0.99 17093 43945
chr19 12847953 12859137 + ASNA1 ENSG00000198356.7 12847953 0.61 0.99 17094 46309
chr19 12862516 12869272 + BEST2 ENSG00000039987.2 12862516 1.0 0.99 17095 60872
chr19 12873817 12983554 - HOOK2 ENSG00000095066.7 12983554 0.8 1.0 17096 18172
chr19 12902310 12904124 + JUNB ENSG00000171223.4 12902310 0.87 1.0 17097 99416
chr19 12907634 12912694 - PRDX2 ENSG00000167815.7 12912694 0.59 1.0 17098 89032
chr19 12917394 12924452 + RNASEH2A ENSG00000104889.4 12917394 0.86 0.99 17099 84332
chr19 12936292 12946242 - RTBDN ENSG00000132026.9 12946242 0.99 1.0 17100 55484
chr19 12944765 12985765 + MAST1 ENSG00000105613.5 12944765 0.78 1.0 17101 56961
chr19 12986025 12992282 - DNASE2 ENSG00000105612.4 12992282 0.64 1.0 17102 9444
chr19 12995237 12997995 - KLF1 ENSG00000105610.4 12997995 0.9 1.0 17103 3731
Expression level of Genes
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miRNAs possibly regulated by vista28659[chr19:12901644-12901726]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results