EnhancerDB
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  3. vista28665[chr19:13023589-13024232]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28665[chr19:13023589-13024232]
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Tissue distribution of vista28665
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Transcription factor that possibly regulate vista28665[chr19:13023589-13024232]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 13023589 13023604 FOXP1 JASPAR yes 70806924
chr19 13023590 13023596 TBP TRANSFAC yes 70806925
chr19 13023590 13023605 FOXP1 JASPAR yes 70806926
chr19 13023590 13023611 IRF1 JASPAR yes 70806927
chr19 13023591 13023606 FOXP1 JASPAR yes 70806928
chr19 13023591 13023612 IRF1 JASPAR yes 70806929
chr19 13023592 13023607 FOXP1 JASPAR yes 70806930
chr19 13023620 13023628 PAX4 JASPAR yes 70806931
chr19 13023637 13023652 HNF4G JASPAR yes 70806932
chr19 13023638 13023653 HNF4A JASPAR yes 70806933
chr19 13023642 13023648 SOX10 JASPAR yes 70806934
chr19 13023678 13023688 NFAT4 TRANSFAC yes 70806935
chr19 13023679 13023683 YY1 TRANSFAC yes 70806936
chr19 13023681 13023691 NFATC3 JASPAR yes 70806937
chr19 13023682 13023689 NFATC2 JASPAR yes 70806938
chr19 13023699 13023704 TFAP2A TRANSFAC yes 70806939
chr19 13023699 13023705 MZF1 JASPAR yes 70806940
chr19 13023707 13023712 GATA2 JASPAR yes 70806941
chr19 13023707 13023728 IRF1 JASPAR yes 70806942
chr19 13023712 13023730 IRF2 JASPAR yes 70806943
chr19 13023713 13023734 IRF1 JASPAR yes 70806944
chr19 13023715 13023730 STAT2 JASPAR yes 70806945
chr19 13023716 13023730 STAT1 JASPAR yes 70806946
chr19 13023717 13023722 H4TF1 TRANSFAC yes 70806947
chr19 13023717 13023731 IRF7 JASPAR yes 70806948
chr19 13023717 13023732 IRF9 JASPAR yes 70806949
chr19 13023722 13023726 YY1 TRANSFAC yes 70806950
chr19 13023729 13023740 FOXH1 JASPAR yes 70806951
chr19 13023738 13023750 NHLH1 JASPAR yes 70806952
chr19 13023739 13023749 NHLH1 JASPAR yes 70806953
chr19 13023757 13023770 POU3F3 JASPAR yes 70806954
chr19 13023757 13023771 POU1F1 JASPAR yes 70806955
chr19 13023758 13023770 POU3F2 JASPAR yes 70806956
chr19 13023759 13023768 POU5F1B JASPAR yes 70806957
chr19 13023765 13023776 FOS JASPAR yes 70806958
chr19 13023765 13023776 FOSL1 JASPAR yes 70806959
chr19 13023765 13023776 JUND JASPAR yes 70806960
chr19 13023765 13023776 NFE2 JASPAR yes 70806961
chr19 13023766 13023774 JUND TRANSFAC yes 70806962
chr19 13023766 13023775 JDP2 JASPAR yes 70806963
chr19 13023766 13023777 JUNB JASPAR yes 70806964
chr19 13023766 13023780 JUN JASPAR yes 70806965
chr19 13023767 13023773 JUN TRANSFAC yes 70806966
chr19 13023794 13023812 NFYA JASPAR yes 70806967
chr19 13023797 13023806 VENTX JASPAR yes 70806968
chr19 13023797 13023807 ALX3 JASPAR yes 70806969
chr19 13023797 13023807 EN2 JASPAR yes 70806970
chr19 13023797 13023807 ESX1 JASPAR yes 70806971
chr19 13023797 13023807 GBX1 JASPAR yes 70806972
chr19 13023797 13023807 GBX2 JASPAR yes 70806973
chr19 13023797 13023807 GSX1 JASPAR yes 70806974
chr19 13023797 13023807 GSX2 JASPAR yes 70806975
chr19 13023797 13023807 HESX1 JASPAR yes 70806976
chr19 13023797 13023807 HOXB3 JASPAR yes 70806977
chr19 13023797 13023807 LBX2 JASPAR yes 70806978
chr19 13023797 13023807 LHX2 JASPAR yes 70806979
chr19 13023797 13023807 MIXL1 JASPAR yes 70806980
chr19 13023797 13023807 MNX1 JASPAR yes 70806981
chr19 13023797 13023807 RAX JASPAR yes 70806982
chr19 13023798 13023802 H1TF2 TRANSFAC yes 70806983
chr19 13023798 13023802 NFE TRANSFAC yes 70806984
chr19 13023798 13023802 SRF TRANSFAC yes 70806985
chr19 13023798 13023806 BARX1 JASPAR yes 70806986
chr19 13023798 13023806 BSX JASPAR yes 70806987
chr19 13023798 13023806 DLX6 JASPAR yes 70806988
chr19 13023798 13023806 ISX JASPAR yes 70806989
chr19 13023798 13023806 LBX1 JASPAR yes 70806990
chr19 13023798 13023806 LHX9 JASPAR yes 70806991
chr19 13023798 13023806 MSX1 JASPAR yes 70806992
chr19 13023798 13023806 MSX2 JASPAR yes 70806993
chr19 13023798 13023806 NKX6-2 JASPAR yes 70806994
chr19 13023798 13023806 PRRX1 JASPAR yes 70806995
chr19 13023798 13023806 RAX2 JASPAR yes 70806996
chr19 13023798 13023806 SHOX JASPAR yes 70806997
chr19 13023798 13023806 UNCX JASPAR yes 70806998
chr19 13023803 13023806 MYB TRANSFAC yes 70806999
chr19 13023809 13023812 MYB TRANSFAC yes 70807000
chr19 13023809 13023821 FOXI1 JASPAR yes 70807001
chr19 13023839 13023849 RELA JASPAR yes 70807002
chr19 13023848 13023863 RFX5 JASPAR yes 70807003
chr19 13023871 13023892 REST JASPAR yes 70807004
chr19 13023878 13023899 REST JASPAR yes 70807005
chr19 13023923 13023941 ESR1 JASPAR yes 70807006
chr19 13023947 13023952 NFY TRANSFAC yes 70807007
chr19 13023951 13023955 LFA1 TRANSFAC yes 70807008
chr19 13023958 13023970 INSM1 JASPAR yes 70807009
chr19 13023969 13023983 MTF1 JASPAR yes 70807010
chr19 13023987 13024003 POU4F2 JASPAR yes 70807011
chr19 13023990 13024007 ZNF410 JASPAR yes 70807012
chr19 13024002 13024006 NFE TRANSFAC yes 70807013
chr19 13024005 13024020 STAT1 JASPAR yes 70807014
chr19 13024007 13024018 STAT1 JASPAR yes 70807015
chr19 13024007 13024018 STAT3 JASPAR yes 70807016
chr19 13024017 13024035 SRF JASPAR yes 70807017
chr19 13024018 13024030 SRF JASPAR yes 70807018
chr19 13024034 13024044 GSC2 JASPAR yes 70807019
chr19 13024034 13024044 GSC JASPAR yes 70807020
chr19 13024035 13024043 OTX2 JASPAR yes 70807021
chr19 13024035 13024044 PITX3 JASPAR yes 70807022
chr19 13024046 13024061 RFX5 JASPAR yes 70807023
chr19 13024060 13024072 GLI2 JASPAR yes 70807024
chr19 13024070 13024084 TLX1 JASPAR yes 70807025
chr19 13024076 13024081 SP1 TRANSFAC yes 70807026
chr19 13024092 13024098 PEA3 TRANSFAC yes 70807027
chr19 13024092 13024103 FLI1 JASPAR yes 70807028
chr19 13024093 13024101 FEV JASPAR yes 70807029
chr19 13024115 13024127 TAL1 JASPAR yes 70807030
chr19 13024117 13024127 NEUROG2 JASPAR yes 70807031
chr19 13024117 13024127 OLIG1 JASPAR yes 70807032
chr19 13024117 13024127 OLIG3 JASPAR yes 70807033
chr19 13024117 13024129 TAL1 JASPAR yes 70807034
chr19 13024137 13024155 NFYA JASPAR yes 70807035
chr19 13024140 13024156 NFYA JASPAR yes 70807036
chr19 13024145 13024150 NFY TRANSFAC yes 70807037
chr19 13024147 13024153 NFIC JASPAR yes 70807038
chr19 13024178 13024183 SP1 TRANSFAC yes 70807039
chr19 13024181 13024186 SP1 TRANSFAC yes 70807040
chr19 13024181 13024192 NFKB1 JASPAR yes 70807041
chr19 13024203 13024206 MYB TRANSFAC yes 70807042
chr19 13024212 13024226 FOXF2 JASPAR yes 70807043
chr19 13024212 13024227 FOXP1 JASPAR yes 70807044
chr19 13024213 13024224 FOXA1 JASPAR yes 70807045
chr19 13024214 13024225 FOXC1 JASPAR yes 70807046
chr19 13024214 13024226 FOXC2 JASPAR yes 70807047
chr19 13024215 13024226 FOXP2 JASPAR yes 70807048
chr19 13024217 13024224 FOXD2 JASPAR yes 70807049
chr19 13024217 13024224 FOXI1 JASPAR yes 70807050
chr19 13024217 13024224 FOXL1 JASPAR yes 70807051
chr19 13024217 13024224 FOXO4 JASPAR yes 70807052
chr19 13024217 13024224 FOXO6 JASPAR yes 70807053
chr19 13024217 13024224 FOXP3 JASPAR yes 70807054
chr19 13024217 13024225 FOXD1 JASPAR yes 70807055
chr19 13024217 13024225 FOXG1 JASPAR yes 70807056
chr19 13024217 13024225 FOXO3 JASPAR yes 70807057
chr19 13024217 13024226 SRY JASPAR yes 70807058
SNP sites on vista28665[chr19:13023589-13024232]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 13024013 rs142393630 A C
STAT1 STAT3
5447320
chr19 13024034 rs115067266 C G
GSC GSC2 SRF
5447321
chr19 13024042 rs570714290 A C,G
GSC GSC2 OTX2 PITX3
5447322
chr19 13024104 rs145937726 G T no 5447323
chr19 13024144 rs538416651 G GT
NFYA
5447324
Genes possibly regulated by vista28665[chr19:13023589-13024232]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 12873817 12983554 - HOOK2 ENSG00000095066.7 12983554 0.8 1.0 17096 59965
chr19 12936292 12946242 - RTBDN ENSG00000132026.9 12946242 0.99 1.0 17100 22653
chr19 12944765 12985765 + MAST1 ENSG00000105613.5 12944765 0.78 1.0 17101 21176
chr19 12986025 12992282 - DNASE2 ENSG00000105612.4 12992282 0.64 1.0 17102 68693
chr19 12995237 12997995 - KLF1 ENSG00000105610.4 12997995 0.9 1.0 17103 74406
chr19 13001840 13025021 + GCDH ENSG00000105607.8 13001840 0.75 0.99 17104 78251
chr19 13009600 13030090 - SYCE2 ENSG00000161860.7 13030090 0.77 0.99 17105 94142
chr19 13033293 13044851 - FARSA ENSG00000179115.6 13044851 0.79 1.0 17106 79381
chr19 13049392 13055303 + CALR ENSG00000179218.9 13049392 0.69 0.99 17107 74840
chr19 13056669 13064456 + RAD23A ENSG00000179262.5 13056669 0.55 1.0 17108 67563
chr19 13064972 13068050 - GADD45GIP1 ENSG00000179271.1 13068050 0.7 0.99 17109 56182
chr19 13075973 13085567 + DAND5 ENSG00000179284.4 13075973 0.96 0.84 17110 48259
chr19 13106422 13209610 + NFIX ENSG00000008441.12 13106422 0.8 0.99 17111 17810
Expression level of Genes
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miRNAs possibly regulated by vista28665[chr19:13023589-13024232]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results