EnhancerDB
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  3. vista28667[chr19:13048278-13048689]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28667[chr19:13048278-13048689]
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Tissue distribution of vista28667
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Transcription factor that possibly regulate vista28667[chr19:13048278-13048689]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 13048137 13048527 MAX UCSC Txn Factor no Conserved 108387053
chr19 13048155 13048539 USF1 UCSC Txn Factor no Conserved 108387056
chr19 13048447 13050609 POLR2A UCSC Txn Factor no Conserved 108387071
chr19 13048278 13048288 NFKB1 JASPAR yes 70807132
chr19 13048278 13048288 RELA JASPAR yes 70807133
chr19 13048278 13048288 REL JASPAR yes 70807134
chr19 13048278 13048289 NFKB1 JASPAR yes 70807135
chr19 13048279 13048289 REL JASPAR yes 70807136
chr19 13048283 13048304 ZNF263 JASPAR yes 70807137
chr19 13048294 13048308 SPI1 JASPAR yes 70807138
chr19 13048295 13048303 EHF JASPAR yes 70807139
chr19 13048316 13048326 SP1 JASPAR yes 70807140
chr19 13048317 13048327 SP1 JASPAR yes 70807141
chr19 13048318 13048322 LFA1 TRANSFAC yes 70807142
chr19 13048329 13048342 SMAD2 JASPAR yes 70807143
chr19 13048336 13048346 MAX JASPAR yes 70807144
chr19 13048336 13048347 USF1 JASPAR yes 70807145
chr19 13048336 13048347 USF2 JASPAR yes 70807146
chr19 13048336 13048348 HES7 JASPAR yes 70807147
chr19 13048337 13048347 BHLHE40 JASPAR yes 70807148
chr19 13048337 13048347 BHLHE41 JASPAR yes 70807149
chr19 13048337 13048347 HEY1 JASPAR yes 70807150
chr19 13048337 13048347 HEY2 JASPAR yes 70807151
chr19 13048337 13048347 MLXIPL JASPAR yes 70807152
chr19 13048337 13048347 MLX JASPAR yes 70807153
chr19 13048337 13048347 MNT JASPAR yes 70807154
chr19 13048337 13048347 TFE3 JASPAR yes 70807155
chr19 13048337 13048347 TFEB JASPAR yes 70807156
chr19 13048337 13048347 TFEC JASPAR yes 70807157
chr19 13048337 13048348 USF2 JASPAR yes 70807158
chr19 13048338 13048348 MAX JASPAR yes 70807159
chr19 13048339 13048344 MYC TRANSFAC yes 70807160
chr19 13048339 13048344 USF1 TRANSFAC yes 70807161
chr19 13048339 13048344 USF2 TRANSFAC yes 70807162
chr19 13048343 13048354 TFAP2C JASPAR yes 70807163
chr19 13048359 13048374 HSF1 JASPAR yes 70807164
chr19 13048360 13048373 HSF1 JASPAR yes 70807165
chr19 13048360 13048373 HSF4 JASPAR yes 70807166
chr19 13048369 13048389 RREB1 JASPAR yes 70807167
chr19 13048373 13048388 NR2C2 JASPAR yes 70807168
chr19 13048380 13048390 SP1 JASPAR yes 70807169
chr19 13048381 13048391 SP1 JASPAR yes 70807170
chr19 13048384 13048389 SP1 TRANSFAC yes 70807171
chr19 13048388 13048392 H4TF2 TRANSFAC yes 70807172
chr19 13048421 13048433 TAL1 JASPAR yes 70807173
chr19 13048437 13048448 E2F6 JASPAR yes 70807174
chr19 13048444 13048450 MZF1 JASPAR yes 70807175
chr19 13048455 13048467 INSM1 JASPAR yes 70807176
chr19 13048455 13048470 NR2C2 JASPAR yes 70807177
chr19 13048482 13048492 BARHL2 JASPAR yes 70807178
chr19 13048485 13048495 HOXB13 JASPAR yes 70807179
chr19 13048485 13048495 HOXD13 JASPAR yes 70807180
chr19 13048485 13048496 HOXA10 JASPAR yes 70807181
chr19 13048486 13048496 ALX3 JASPAR yes 70807182
chr19 13048486 13048496 GSX2 JASPAR yes 70807183
chr19 13048486 13048496 MNX1 JASPAR yes 70807184
chr19 13048487 13048495 BARX1 JASPAR yes 70807185
chr19 13048487 13048495 BSX JASPAR yes 70807186
chr19 13048487 13048495 ISL2 JASPAR yes 70807187
chr19 13048487 13048495 LMX1B JASPAR yes 70807188
chr19 13048487 13048495 MSX1 JASPAR yes 70807189
chr19 13048487 13048495 MSX2 JASPAR yes 70807190
chr19 13048490 13048501 CEBPA JASPAR yes 70807191
chr19 13048507 13048519 E2F8 JASPAR yes 70807192
chr19 13048512 13048533 REST JASPAR yes 70807193
chr19 13048513 13048532 REST JASPAR yes 70807194
chr19 13048515 13048527 ZBTB7C JASPAR yes 70807195
chr19 13048515 13048530 RUNX2 JASPAR yes 70807196
chr19 13048516 13048526 RUNX3 JASPAR yes 70807197
chr19 13048528 13048540 ZBTB7B JASPAR yes 70807198
chr19 13048528 13048540 ZBTB7C JASPAR yes 70807199
chr19 13048539 13048543 YY1 TRANSFAC yes 70807200
chr19 13048547 13048564 RXRA JASPAR yes 70807201
chr19 13048547 13048568 ZNF263 JASPAR yes 70807202
chr19 13048553 13048560 CEBPA TRANSFAC yes 70807203
chr19 13048556 13048570 PLAG1 JASPAR yes 70807204
chr19 13048556 13048571 NR2C2 JASPAR yes 70807205
chr19 13048557 13048571 RXRB JASPAR yes 70807206
chr19 13048566 13048571 SP1 TRANSFAC yes 70807207
chr19 13048587 13048590 MYB TRANSFAC yes 70807208
chr19 13048592 13048596 NFE TRANSFAC yes 70807209
chr19 13048593 13048598 GATA2 JASPAR yes 70807210
chr19 13048595 13048601 MZF1 JASPAR yes 70807211
chr19 13048629 13048637 EHF JASPAR yes 70807212
chr19 13048674 13048678 YY1 TRANSFAC yes 70807213
SNP sites on vista28667[chr19:13048278-13048689]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 13048357 rs73505363 T A
MAX USF1
5447482
chr19 13048608 rs1010222 A G
POLR2A
5447483
Genes possibly regulated by vista28667[chr19:13048278-13048689]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 12873817 12983554 - HOOK2 ENSG00000095066.7 12983554 0.8 1.0 17096 35276
chr19 12986025 12992282 - DNASE2 ENSG00000105612.4 12992282 0.64 1.0 17102 44004
chr19 12995237 12997995 - KLF1 ENSG00000105610.4 12997995 0.9 1.0 17103 49717
chr19 13001840 13025021 + GCDH ENSG00000105607.8 13001840 0.75 0.99 17104 53562
chr19 13009600 13030090 - SYCE2 ENSG00000161860.7 13030090 0.77 0.99 17105 81812
chr19 13033293 13044851 - FARSA ENSG00000179115.6 13044851 0.79 1.0 17106 96573
chr19 13049392 13055303 + CALR ENSG00000179218.9 13049392 0.69 0.99 17107 99297
chr19 13056669 13064456 + RAD23A ENSG00000179262.5 13056669 0.55 1.0 17108 92020
chr19 13064972 13068050 - GADD45GIP1 ENSG00000179271.1 13068050 0.7 0.99 17109 80639
chr19 13075973 13085567 + DAND5 ENSG00000179284.4 13075973 0.96 0.84 17110 72716
chr19 13106422 13209610 + NFIX ENSG00000008441.12 13106422 0.8 0.99 17111 42267
Expression level of Genes
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miRNAs possibly regulated by vista28667[chr19:13048278-13048689]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr19 13051335 13051354 + hsa-miR-6515-3p MIMAT0025487 13049422 0.004815409309791332 0.872573 0.0 827
Expression level of miRNAs
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