EnhancerDB
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  3. vista28669[chr19:13095998-13096573]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28669[chr19:13095998-13096573]
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Tissue distribution of vista28669
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Transcription factor that possibly regulate vista28669[chr19:13095998-13096573]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 13096031 13096475 MAX UCSC Txn Factor no Conserved 108387251
chr19 13096042 13096480 MYC UCSC Txn Factor no Conserved 108387257
chr19 13096042 13096481 MXI1 UCSC Txn Factor no Conserved 108387258
chr19 13096126 13096353 USF1 UCSC Txn Factor no Conserved 108387303
chr19 13096000 13096008 MEIS3 JASPAR yes 70807306
chr19 13096000 13096008 MEIS3 JASPAR yes 112498507
chr19 13096001 13096005 NFE TRANSFAC yes 70807307
chr19 13096001 13096005 NFE TRANSFAC yes 112498508
chr19 13096003 13096010 USF2 TRANSFAC yes 70807308
chr19 13096003 13096010 USF2 TRANSFAC yes 112498509
chr19 13096005 13096010 USF2 TRANSFAC yes 70807309
chr19 13096005 13096010 USF2 TRANSFAC yes 112498510
chr19 13096008 13096023 SCRT1 JASPAR yes 70807310
chr19 13096008 13096023 SCRT1 JASPAR yes 112498511
chr19 13096039 13096057 ESR1 JASPAR yes 70807311
chr19 13096039 13096057 ESR1 JASPAR yes 112498512
chr19 13096070 13096083 SMAD2 JASPAR yes 70807312
chr19 13096070 13096083 SMAD2 JASPAR yes 112498513
chr19 13096127 13096130 MYB TRANSFAC yes 70807313
chr19 13096127 13096130 MYB TRANSFAC yes 112498514
chr19 13096156 13096168 NHLH1 JASPAR yes 70807314
chr19 13096156 13096168 NHLH1 JASPAR yes 112498515
chr19 13096157 13096167 NHLH1 JASPAR yes 70807315
chr19 13096157 13096167 NHLH1 JASPAR yes 112498516
chr19 13096173 13096184 EBF1 JASPAR yes 70807316
chr19 13096173 13096184 EBF1 JASPAR yes 112498517
chr19 13096177 13096182 TFAP2A TRANSFAC yes 70807317
chr19 13096177 13096182 TFAP2A TRANSFAC yes 112498518
chr19 13096177 13096183 MZF1 JASPAR yes 70807318
chr19 13096177 13096183 MZF1 JASPAR yes 112498519
chr19 13096189 13096193 ESR1 TRANSFAC yes 70807319
chr19 13096189 13096193 ESR1 TRANSFAC yes 112498520
chr19 13096219 13096224 SP1 TRANSFAC yes 70807320
chr19 13096219 13096224 SP1 TRANSFAC yes 112498521
chr19 13096222 13096232 SP1 JASPAR yes 70807321
chr19 13096222 13096232 SP1 JASPAR yes 112498522
chr19 13096223 13096228 SP1 TRANSFAC yes 70807322
chr19 13096223 13096228 SP1 TRANSFAC yes 112498523
chr19 13096226 13096245 CTCF JASPAR yes 70807323
chr19 13096226 13096245 CTCF JASPAR yes 112498524
chr19 13096239 13096253 CREB3L1 JASPAR yes 70807324
chr19 13096239 13096253 CREB3L1 JASPAR yes 112498525
chr19 13096240 13096250 MAX JASPAR yes 70807325
chr19 13096240 13096250 MAX JASPAR yes 112498526
chr19 13096240 13096251 USF1 JASPAR yes 70807326
chr19 13096240 13096251 USF2 JASPAR yes 70807327
chr19 13096240 13096251 USF1 JASPAR yes 112498527
chr19 13096240 13096251 USF2 JASPAR yes 112498528
chr19 13096240 13096252 HES5 JASPAR yes 70807328
chr19 13096240 13096252 HES5 JASPAR yes 112498529
chr19 13096241 13096251 HEY1 JASPAR yes 70807329
chr19 13096241 13096251 HEY2 JASPAR yes 70807330
chr19 13096241 13096251 MAX JASPAR yes 70807331
chr19 13096241 13096251 MNT JASPAR yes 70807332
chr19 13096241 13096251 TFE3 JASPAR yes 70807333
chr19 13096241 13096251 TFEB JASPAR yes 70807334
chr19 13096241 13096251 HEY1 JASPAR yes 112498530
chr19 13096241 13096251 HEY2 JASPAR yes 112498531
chr19 13096241 13096251 MAX JASPAR yes 112498532
chr19 13096241 13096251 MNT JASPAR yes 112498533
chr19 13096241 13096251 TFE3 JASPAR yes 112498534
chr19 13096241 13096251 TFEB JASPAR yes 112498535
chr19 13096241 13096252 USF1 JASPAR yes 70807335
chr19 13096241 13096252 USF2 JASPAR yes 70807336
chr19 13096241 13096252 USF1 JASPAR yes 112498536
chr19 13096241 13096252 USF2 JASPAR yes 112498537
chr19 13096242 13096249 USF1 JASPAR yes 70807337
chr19 13096242 13096249 USF1 JASPAR yes 112498538
chr19 13096242 13096252 MAX JASPAR yes 70807338
chr19 13096242 13096252 MAX JASPAR yes 112498539
chr19 13096243 13096248 MYC TRANSFAC yes 70807339
chr19 13096243 13096248 USF1 TRANSFAC yes 70807340
chr19 13096243 13096248 USF2 TRANSFAC yes 70807341
chr19 13096243 13096248 MYC TRANSFAC yes 112498540
chr19 13096243 13096248 USF1 TRANSFAC yes 112498541
chr19 13096243 13096248 USF2 TRANSFAC yes 112498542
chr19 13096243 13096250 USF1 JASPAR yes 70807342
chr19 13096243 13096250 USF1 JASPAR yes 112498543
chr19 13096253 13096265 NHLH1 JASPAR yes 70807343
chr19 13096253 13096265 NHLH1 JASPAR yes 112498544
chr19 13096253 13096266 ZBTB18 JASPAR yes 70807344
chr19 13096253 13096266 ZBTB18 JASPAR yes 112498545
chr19 13096254 13096264 NHLH1 JASPAR yes 70807345
chr19 13096254 13096264 NHLH1 JASPAR yes 112498546
chr19 13096309 13096314 ATF1 TRANSFAC yes 70807346
chr19 13096309 13096314 ATF1 TRANSFAC yes 112498547
chr19 13096312 13096327 RUNX2 JASPAR yes 70807347
chr19 13096312 13096327 RUNX2 JASPAR yes 112498548
chr19 13096319 13096329 SREBF1 JASPAR yes 70807348
chr19 13096319 13096329 SREBF1 JASPAR yes 112498549
chr19 13096320 13096328 MGA JASPAR yes 70807349
chr19 13096320 13096328 MGA JASPAR yes 112498550
chr19 13096327 13096345 RARA JASPAR yes 70807350
chr19 13096327 13096345 RARA JASPAR yes 112498551
chr19 13096329 13096333 ESR1 TRANSFAC yes 70807351
chr19 13096329 13096333 ESR1 TRANSFAC yes 112498552
chr19 13096352 13096359 PEA3 TRANSFAC yes 70807352
chr19 13096352 13096359 PEA3 TRANSFAC yes 112498553
chr19 13096356 13096369 SMAD2 JASPAR yes 70807353
chr19 13096356 13096369 SMAD2 JASPAR yes 112498554
chr19 13096368 13096380 NHLH1 JASPAR yes 70807354
chr19 13096368 13096380 NHLH1 JASPAR yes 112498555
chr19 13096377 13096385 TBX5 JASPAR yes 70807355
chr19 13096377 13096385 TBX5 JASPAR yes 112498556
chr19 13096401 13096411 TBX21 JASPAR yes 70807356
chr19 13096401 13096411 TBX21 JASPAR yes 112498557
chr19 13096401 13096414 EOMES JASPAR yes 70807357
chr19 13096401 13096414 EOMES JASPAR yes 112498558
chr19 13096402 13096410 MGA JASPAR yes 70807358
chr19 13096402 13096410 TBX15 JASPAR yes 70807359
chr19 13096402 13096410 TBX1 JASPAR yes 70807360
chr19 13096402 13096410 TBX4 JASPAR yes 70807361
chr19 13096402 13096410 TBX5 JASPAR yes 70807362
chr19 13096402 13096410 MGA JASPAR yes 112498559
chr19 13096402 13096410 TBX15 JASPAR yes 112498560
chr19 13096402 13096410 TBX1 JASPAR yes 112498561
chr19 13096402 13096410 TBX4 JASPAR yes 112498562
chr19 13096402 13096410 TBX5 JASPAR yes 112498563
chr19 13096419 13096430 USF1 JASPAR yes 70807363
chr19 13096419 13096430 USF2 JASPAR yes 70807364
chr19 13096419 13096430 USF1 JASPAR yes 112498564
chr19 13096419 13096430 USF2 JASPAR yes 112498565
chr19 13096424 13096432 MEIS2 JASPAR yes 70807365
chr19 13096424 13096432 MEIS3 JASPAR yes 70807366
chr19 13096424 13096432 MEIS2 JASPAR yes 112498566
chr19 13096424 13096432 MEIS3 JASPAR yes 112498567
chr19 13096433 13096453 RREB1 JASPAR yes 70807367
chr19 13096433 13096453 RREB1 JASPAR yes 112498568
chr19 13096435 13096455 RREB1 JASPAR yes 70807368
chr19 13096435 13096455 RREB1 JASPAR yes 112498569
chr19 13096439 13096449 TBX21 JASPAR yes 70807369
chr19 13096439 13096449 TBX21 JASPAR yes 112498570
chr19 13096439 13096450 TBX20 JASPAR yes 70807370
chr19 13096439 13096450 TBX2 JASPAR yes 70807371
chr19 13096439 13096450 TBX20 JASPAR yes 112498571
chr19 13096439 13096450 TBX2 JASPAR yes 112498572
chr19 13096439 13096452 EOMES JASPAR yes 70807372
chr19 13096439 13096452 EOMES JASPAR yes 112498573
chr19 13096440 13096448 MGA JASPAR yes 70807373
chr19 13096440 13096448 TBX15 JASPAR yes 70807374
chr19 13096440 13096448 TBX1 JASPAR yes 70807375
chr19 13096440 13096448 TBX4 JASPAR yes 70807376
chr19 13096440 13096448 TBX5 JASPAR yes 70807377
chr19 13096440 13096448 MGA JASPAR yes 112498574
chr19 13096440 13096448 TBX15 JASPAR yes 112498575
chr19 13096440 13096448 TBX1 JASPAR yes 112498576
chr19 13096440 13096448 TBX4 JASPAR yes 112498577
chr19 13096440 13096448 TBX5 JASPAR yes 112498578
chr19 13096449 13096464 RFX5 JASPAR yes 70807378
chr19 13096449 13096464 RFX5 JASPAR yes 112498579
chr19 13096486 13096492 ZNF354C JASPAR yes 70807379
chr19 13096486 13096492 ZNF354C JASPAR yes 112498580
chr19 13096491 13096506 RUNX2 JASPAR yes 70807380
chr19 13096491 13096506 RUNX2 JASPAR yes 112498581
chr19 13096492 13096498 SOX10 JASPAR yes 70807381
chr19 13096492 13096498 SOX10 JASPAR yes 112498582
chr19 13096495 13096505 RUNX3 JASPAR yes 70807382
chr19 13096495 13096505 RUNX3 JASPAR yes 112498583
chr19 13096505 13096515 TBX21 JASPAR yes 70807383
chr19 13096505 13096515 TBX21 JASPAR yes 112498584
chr19 13096505 13096516 TBX20 JASPAR yes 70807384
chr19 13096505 13096516 TBX2 JASPAR yes 70807385
chr19 13096505 13096516 TBX20 JASPAR yes 112498585
chr19 13096505 13096516 TBX2 JASPAR yes 112498586
chr19 13096505 13096518 EOMES JASPAR yes 70807386
chr19 13096505 13096518 EOMES JASPAR yes 112498587
chr19 13096506 13096514 MGA JASPAR yes 70807387
chr19 13096506 13096514 TBX15 JASPAR yes 70807388
chr19 13096506 13096514 TBX1 JASPAR yes 70807389
chr19 13096506 13096514 TBX4 JASPAR yes 70807390
chr19 13096506 13096514 TBX5 JASPAR yes 70807391
chr19 13096506 13096514 MGA JASPAR yes 112498588
chr19 13096506 13096514 TBX15 JASPAR yes 112498589
chr19 13096506 13096514 TBX1 JASPAR yes 112498590
chr19 13096506 13096514 TBX4 JASPAR yes 112498591
chr19 13096506 13096514 TBX5 JASPAR yes 112498592
chr19 13096506 13096516 TBR1 JASPAR yes 70807392
chr19 13096506 13096516 TBR1 JASPAR yes 112498593
chr19 13096553 13096557 NFE TRANSFAC yes 70807393
chr19 13096553 13096557 NFE TRANSFAC yes 112498594
SNP sites on vista28669[chr19:13095998-13096573]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 13096029 rs190639096 G A no 5447746
chr19 13096122 rs116599500 T C
MAX MXI1 MYC
5447747
chr19 13096147 rs74900983 C G
MAX MXI1 MYC USF1
5447748
chr19 13096236 rs111714990 C T
CTCF MAX MXI1 MYC USF1
5447749
chr19 13096285 rs4334415 A G
MAX MXI1 MYC USF1
5447750
chr19 13096323 rs148015781 G T
MAX MGA MXI1 MYC RUNX2 SREBF1 USF1
5447751
chr19 13096403 rs144614024 G A
EOMES MAX MGA MXI1 MYC TBX1 TBX15 TBX21 TBX4 TBX5
5447752
chr19 13096562 rs115925597 C T no 5447753
Genes possibly regulated by vista28669[chr19:13095998-13096573]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 12995237 12997995 - KLF1 ENSG00000105610.4 12997995 0.9 1.0 17103 1997
chr19 13001840 13025021 + GCDH ENSG00000105607.8 13001840 0.75 0.99 17104 5842
chr19 13009600 13030090 - SYCE2 ENSG00000161860.7 13030090 0.77 0.99 17105 34092
chr19 13033293 13044851 - FARSA ENSG00000179115.6 13044851 0.79 1.0 17106 48853
chr19 13049392 13055303 + CALR ENSG00000179218.9 13049392 0.69 0.99 17107 53394
chr19 13056669 13064456 + RAD23A ENSG00000179262.5 13056669 0.55 1.0 17108 60671
chr19 13064972 13068050 - GADD45GIP1 ENSG00000179271.1 13068050 0.7 0.99 17109 72052
chr19 13075973 13085567 + DAND5 ENSG00000179284.4 13075973 0.96 0.84 17110 79975
chr19 13106422 13209610 + NFIX ENSG00000008441.12 13106422 0.8 0.99 17111 90151
Expression level of Genes
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miRNAs possibly regulated by vista28669[chr19:13095998-13096573]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results