EnhancerDB
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  3. vista28670[chr19:13113447-13113871]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28670[chr19:13113447-13113871]
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Tissue distribution of vista28670
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Transcription factor that possibly regulate vista28670[chr19:13113447-13113871]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 13113453 13113465 NHLH1 JASPAR yes 70807394
chr19 13113453 13113465 NHLH1 JASPAR yes 112499764
chr19 13113454 13113464 NHLH1 JASPAR yes 70807395
chr19 13113454 13113464 NHLH1 JASPAR yes 112499765
chr19 13113482 13113496 E2F7 JASPAR yes 70807396
chr19 13113482 13113496 E2F7 JASPAR yes 112499766
chr19 13113517 13113523 MAZ TRANSFAC yes 70807397
chr19 13113517 13113523 MAZ TRANSFAC yes 112499767
chr19 13113525 13113530 SP1 TRANSFAC yes 70807398
chr19 13113525 13113530 SP1 TRANSFAC yes 112499768
chr19 13113526 13113531 SP1 TRANSFAC yes 70807399
chr19 13113526 13113531 SP1 TRANSFAC yes 112499769
chr19 13113533 13113542 HIC2 JASPAR yes 70807400
chr19 13113533 13113542 HIC2 JASPAR yes 112499770
chr19 13113536 13113540 LFA1 TRANSFAC yes 70807401
chr19 13113536 13113540 LFA1 TRANSFAC yes 112499771
chr19 13113550 13113565 NFYB JASPAR yes 70807402
chr19 13113550 13113565 NFYB JASPAR yes 112499772
chr19 13113552 13113568 NFYA JASPAR yes 70807403
chr19 13113552 13113568 NFYA JASPAR yes 112499773
chr19 13113553 13113571 NFYA JASPAR yes 70807404
chr19 13113553 13113571 NFYA JASPAR yes 112499774
chr19 13113557 13113561 H1TF2 TRANSFAC yes 70807405
chr19 13113557 13113561 NFE TRANSFAC yes 70807406
chr19 13113557 13113561 SRF TRANSFAC yes 70807407
chr19 13113557 13113561 H1TF2 TRANSFAC yes 112499775
chr19 13113557 13113561 NFE TRANSFAC yes 112499776
chr19 13113557 13113561 SRF TRANSFAC yes 112499777
chr19 13113562 13113568 ETS1 JASPAR yes 70807408
chr19 13113562 13113568 SPI1 JASPAR yes 70807409
chr19 13113562 13113568 ETS1 JASPAR yes 112499778
chr19 13113562 13113568 SPI1 JASPAR yes 112499779
chr19 13113580 13113585 TFAP2A TRANSFAC yes 70807410
chr19 13113580 13113585 TFAP2A TRANSFAC yes 112499780
chr19 13113580 13113586 MZF1 JASPAR yes 70807411
chr19 13113580 13113586 MZF1 JASPAR yes 112499781
chr19 13113589 13113599 ZNF740 JASPAR yes 70807412
chr19 13113589 13113599 ZNF740 JASPAR yes 112499782
chr19 13113593 13113607 PLAG1 JASPAR yes 70807413
chr19 13113593 13113607 PLAG1 JASPAR yes 112499783
chr19 13113604 13113619 TFAP2A JASPAR yes 70807414
chr19 13113604 13113619 TFAP2C JASPAR yes 70807415
chr19 13113604 13113619 TFAP2A JASPAR yes 112499784
chr19 13113604 13113619 TFAP2C JASPAR yes 112499785
chr19 13113606 13113621 TFAP2C JASPAR yes 70807416
chr19 13113606 13113621 TFAP2C JASPAR yes 112499786
chr19 13113613 13113634 ZNF263 JASPAR yes 70807417
chr19 13113613 13113634 ZNF263 JASPAR yes 112499787
chr19 13113617 13113632 ZIC3 JASPAR yes 70807418
chr19 13113617 13113632 ZIC3 JASPAR yes 112499788
chr19 13113630 13113649 CTCF JASPAR yes 70807419
chr19 13113630 13113649 CTCF JASPAR yes 112499789
chr19 13113633 13113652 REST JASPAR yes 70807420
chr19 13113633 13113652 REST JASPAR yes 112499790
chr19 13113638 13113653 NR2C2 JASPAR yes 70807421
chr19 13113638 13113653 NR2C2 JASPAR yes 112499791
chr19 13113639 13113649 SP1 JASPAR yes 70807422
chr19 13113639 13113649 SP1 JASPAR yes 112499792
chr19 13113641 13113645 LFA1 TRANSFAC yes 70807423
chr19 13113641 13113645 LFA1 TRANSFAC yes 112499793
chr19 13113641 13113653 INSM1 JASPAR yes 70807424
chr19 13113641 13113653 INSM1 JASPAR yes 112499794
chr19 13113648 13113652 LFA1 TRANSFAC yes 70807425
chr19 13113648 13113652 LFA1 TRANSFAC yes 112499795
chr19 13113653 13113662 HIC2 JASPAR yes 70807426
chr19 13113653 13113662 HIC2 JASPAR yes 112499796
chr19 13113672 13113687 HNF4G JASPAR yes 70807427
chr19 13113672 13113687 HNF4G JASPAR yes 112499797
chr19 13113675 13113685 SP1 JASPAR yes 70807428
chr19 13113675 13113685 SP1 JASPAR yes 112499798
chr19 13113676 13113686 SP1 JASPAR yes 70807429
chr19 13113676 13113686 SP1 JASPAR yes 112499799
chr19 13113678 13113684 NFE2 TRANSFAC yes 70807430
chr19 13113678 13113684 NFE2 TRANSFAC yes 112499800
chr19 13113685 13113695 TFAP4 JASPAR yes 70807431
chr19 13113685 13113695 TFAP4 JASPAR yes 112499801
chr19 13113707 13113715 EHF JASPAR yes 70807432
chr19 13113707 13113715 EHF JASPAR yes 112499802
chr19 13113708 13113719 STAT1 JASPAR yes 70807433
chr19 13113708 13113719 STAT3 JASPAR yes 70807434
chr19 13113708 13113719 STAT1 JASPAR yes 112499803
chr19 13113708 13113719 STAT3 JASPAR yes 112499804
chr19 13113724 13113728 LFA1 TRANSFAC yes 70807435
chr19 13113724 13113728 LFA1 TRANSFAC yes 112499805
chr19 13113737 13113752 AR JASPAR yes 70807436
chr19 13113737 13113752 AR JASPAR yes 112499806
chr19 13113740 13113744 NFE TRANSFAC yes 70807437
chr19 13113740 13113744 NFE TRANSFAC yes 112499807
chr19 13113740 13113753 SMAD2 JASPAR yes 70807438
chr19 13113740 13113753 SMAD2 JASPAR yes 112499808
chr19 13113744 13113748 NFE TRANSFAC yes 70807439
chr19 13113744 13113748 NFE TRANSFAC yes 112499809
chr19 13113747 13113753 MZF1 JASPAR yes 70807440
chr19 13113747 13113753 MZF1 JASPAR yes 112499810
chr19 13113748 13113757 ZEB1 JASPAR yes 70807441
chr19 13113748 13113757 ZEB1 JASPAR yes 112499811
chr19 13113751 13113756 USF2 TRANSFAC yes 70807442
chr19 13113751 13113756 USF2 TRANSFAC yes 112499812
chr19 13113776 13113782 PEA3 TRANSFAC yes 70807443
chr19 13113776 13113782 PEA3 TRANSFAC yes 112499813
chr19 13113796 13113810 MTF1 JASPAR yes 70807444
chr19 13113796 13113810 MTF1 JASPAR yes 112499814
chr19 13113805 13113819 GLIS2 JASPAR yes 70807445
chr19 13113805 13113819 GLIS2 JASPAR yes 112499815
chr19 13113806 13113820 EBF1 JASPAR yes 70807446
chr19 13113806 13113820 EBF1 JASPAR yes 112499816
chr19 13113807 13113818 EBF1 JASPAR yes 70807447
chr19 13113807 13113818 EBF1 JASPAR yes 112499817
chr19 13113807 13113821 PLAG1 JASPAR yes 70807448
chr19 13113807 13113821 PLAG1 JASPAR yes 112499818
chr19 13113861 13113866 GATA2 JASPAR yes 70807449
chr19 13113861 13113866 GATA2 JASPAR yes 112499819
chr19 13113863 13113873 FIGLA JASPAR yes 70807450
chr19 13113863 13113873 TCF3 JASPAR yes 70807451
chr19 13113863 13113873 FIGLA JASPAR yes 112499820
chr19 13113863 13113873 TCF3 JASPAR yes 112499821
SNP sites on vista28670[chr19:13113447-13113871]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 13113549 rs145272752 G T no 5447966
chr19 13113563 rs182506366 C A
ETS1 NFYA NFYB SPI1
5447967
chr19 13113641 rs10411958 T C
CTCF INSM1 LFA1 NR2C2 REST SP1
5447968
chr19 13113731 rs76043171 G C no 5447969
chr19 13113778 rs192156411 G T
PEA3
5447970
Genes possibly regulated by vista28670[chr19:13113447-13113871]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 13009600 13030090 - SYCE2 ENSG00000161860.7 13030090 0.77 0.99 17105 16643
chr19 13033293 13044851 - FARSA ENSG00000179115.6 13044851 0.79 1.0 17106 31404
chr19 13049392 13055303 + CALR ENSG00000179218.9 13049392 0.69 0.99 17107 35945
chr19 13056669 13064456 + RAD23A ENSG00000179262.5 13056669 0.55 1.0 17108 43222
chr19 13064972 13068050 - GADD45GIP1 ENSG00000179271.1 13068050 0.7 0.99 17109 54603
chr19 13075973 13085567 + DAND5 ENSG00000179284.4 13075973 0.96 0.84 17110 62526
chr19 13106422 13209610 + NFIX ENSG00000008441.12 13106422 0.8 0.99 17111 92975
Expression level of Genes
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miRNAs possibly regulated by vista28670[chr19:13113447-13113871]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results