EnhancerDB
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  3. vista28672[chr19:13125867-13126278]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28672[chr19:13125867-13126278]
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Tissue distribution of vista28672
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Transcription factor that possibly regulate vista28672[chr19:13125867-13126278]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 13120812 13125937 EZH2 UCSC Txn Factor no Conserved 108387369
chr19 13120812 13125937 EZH2 UCSC Txn Factor no Conserved 108387370
chr19 13125852 13125867 RFX5 JASPAR yes 70807530
chr19 13125852 13125867 RFX5 JASPAR yes 112501151
chr19 13125861 13125870 NKX2-8 JASPAR yes 70807531
chr19 13125861 13125870 NKX2-8 JASPAR yes 112501152
chr19 13125878 13125884 TCF4 TRANSFAC yes 70807532
chr19 13125878 13125884 TCF4 TRANSFAC yes 112501153
chr19 13125894 13125902 FOXL1 JASPAR yes 70807533
chr19 13125894 13125902 FOXL1 JASPAR yes 112501154
chr19 13125898 13125902 YY1 TRANSFAC yes 70807534
chr19 13125898 13125902 YY1 TRANSFAC yes 112501155
chr19 13125905 13125915 FIGLA JASPAR yes 70807535
chr19 13125905 13125915 FIGLA JASPAR yes 112501156
chr19 13125918 13125922 YY1 TRANSFAC yes 70807536
chr19 13125918 13125922 YY1 TRANSFAC yes 112501157
chr19 13125921 13125931 CLOCK JASPAR yes 70807537
chr19 13125921 13125931 CLOCK JASPAR yes 112501158
chr19 13125922 13125932 MAX JASPAR yes 70807538
chr19 13125922 13125932 MAX JASPAR yes 112501159
chr19 13125923 13125944 IRF1 JASPAR yes 70807539
chr19 13125923 13125944 IRF1 JASPAR yes 112501160
chr19 13125925 13125940 STAT2 JASPAR yes 70807540
chr19 13125925 13125940 STAT2 JASPAR yes 112501161
chr19 13125928 13125946 IRF2 JASPAR yes 70807541
chr19 13125928 13125946 IRF2 JASPAR yes 112501162
chr19 13125929 13125950 IRF1 JASPAR yes 70807542
chr19 13125929 13125950 IRF1 JASPAR yes 112501163
chr19 13125930 13125945 LEF1 JASPAR yes 70807543
chr19 13125930 13125945 LEF1 JASPAR yes 112501164
chr19 13125931 13125946 PRDM1 JASPAR yes 70807544
chr19 13125931 13125946 STAT2 JASPAR yes 70807545
chr19 13125931 13125946 PRDM1 JASPAR yes 112501165
chr19 13125931 13125946 STAT2 JASPAR yes 112501166
chr19 13125933 13125945 IRF1 JASPAR yes 70807546
chr19 13125933 13125945 IRF1 JASPAR yes 112501167
chr19 13125935 13125950 FOXP1 JASPAR yes 70807547
chr19 13125935 13125950 FOXP1 JASPAR yes 112501168
chr19 13125938 13125942 YY1 TRANSFAC yes 70807548
chr19 13125938 13125942 YY1 TRANSFAC yes 112501169
chr19 13125942 13125947 ETS2 TRANSFAC yes 70807549
chr19 13125942 13125947 ETS2 TRANSFAC yes 112501170
chr19 13125950 13125954 YY1 TRANSFAC yes 70807550
chr19 13125950 13125954 YY1 TRANSFAC yes 112501171
chr19 13125955 13125959 H4TF2 TRANSFAC yes 70807551
chr19 13125955 13125959 H4TF2 TRANSFAC yes 112501172
chr19 13125988 13126003 FOXP1 JASPAR yes 70807552
chr19 13125988 13126003 FOXP1 JASPAR yes 112501173
chr19 13125989 13126002 POU2F2 JASPAR yes 70807553
chr19 13125989 13126002 POU2F2 JASPAR yes 112501174
chr19 13125991 13126003 POU2F1 JASPAR yes 70807554
chr19 13125991 13126003 POU2F1 JASPAR yes 112501175
chr19 13125992 13126001 POU5F1B JASPAR yes 70807555
chr19 13125992 13126001 POU5F1B JASPAR yes 112501176
chr19 13125993 13126001 FOXL1 JASPAR yes 70807556
chr19 13125993 13126001 FOXL1 JASPAR yes 112501177
chr19 13126004 13126025 IRF1 JASPAR yes 70807557
chr19 13126004 13126025 IRF1 JASPAR yes 112501178
chr19 13126006 13126021 STAT2 JASPAR yes 70807558
chr19 13126006 13126021 STAT2 JASPAR yes 112501179
chr19 13126007 13126028 ZNF263 JASPAR yes 70807559
chr19 13126007 13126028 ZNF263 JASPAR yes 112501180
chr19 13126011 13126026 FOXP1 JASPAR yes 70807560
chr19 13126011 13126026 FOXP1 JASPAR yes 112501181
chr19 13126046 13126050 YY1 TRANSFAC yes 70807561
chr19 13126046 13126050 YY1 TRANSFAC yes 112501182
chr19 13126056 13126074 IRF2 JASPAR yes 70807562
chr19 13126056 13126074 IRF2 JASPAR yes 112501183
chr19 13126057 13126078 IRF1 JASPAR yes 70807563
chr19 13126057 13126078 IRF1 JASPAR yes 112501184
chr19 13126059 13126074 PRDM1 JASPAR yes 70807564
chr19 13126059 13126074 STAT2 JASPAR yes 70807565
chr19 13126059 13126074 PRDM1 JASPAR yes 112501185
chr19 13126059 13126074 STAT2 JASPAR yes 112501186
chr19 13126060 13126074 SPIC JASPAR yes 70807566
chr19 13126060 13126074 STAT1 JASPAR yes 70807567
chr19 13126060 13126074 SPIC JASPAR yes 112501187
chr19 13126060 13126074 STAT1 JASPAR yes 112501188
chr19 13126061 13126075 IRF7 JASPAR yes 70807568
chr19 13126061 13126075 IRF8 JASPAR yes 70807569
chr19 13126061 13126075 IRF7 JASPAR yes 112501189
chr19 13126061 13126075 IRF8 JASPAR yes 112501190
chr19 13126061 13126076 IRF9 JASPAR yes 70807570
chr19 13126061 13126076 IRF9 JASPAR yes 112501191
chr19 13126074 13126089 MEF2C JASPAR yes 70807571
chr19 13126074 13126089 MEF2C JASPAR yes 112501192
chr19 13126080 13126095 HNF1A JASPAR yes 70807572
chr19 13126080 13126095 HNF1A JASPAR yes 112501193
chr19 13126082 13126094 HNF1B JASPAR yes 70807573
chr19 13126082 13126094 HNF1B JASPAR yes 112501194
chr19 13126085 13126096 PHOX2A JASPAR yes 70807574
chr19 13126085 13126096 PROP1 JASPAR yes 70807575
chr19 13126085 13126096 PHOX2A JASPAR yes 112501195
chr19 13126085 13126096 PROP1 JASPAR yes 112501196
chr19 13126086 13126101 MEF2A JASPAR yes 70807576
chr19 13126086 13126101 MEF2A JASPAR yes 112501197
chr19 13126087 13126102 MEF2C JASPAR yes 70807577
chr19 13126087 13126102 MEF2C JASPAR yes 112501198
chr19 13126088 13126100 MEF2A JASPAR yes 70807578
chr19 13126088 13126100 MEF2A JASPAR yes 112501199
chr19 13126102 13126106 TEAD2 TRANSFAC yes 70807579
chr19 13126102 13126106 TEAD2 TRANSFAC yes 112501200
chr19 13126102 13126107 TBP TRANSFAC yes 70807580
chr19 13126102 13126107 TBP TRANSFAC yes 112501201
chr19 13126118 13126133 PRDM1 JASPAR yes 70807581
chr19 13126118 13126133 PRDM1 JASPAR yes 112501202
chr19 13126118 13126136 IRF2 JASPAR yes 70807582
chr19 13126118 13126136 IRF2 JASPAR yes 112501203
chr19 13126129 13126139 ZNF740 JASPAR yes 70807583
chr19 13126129 13126139 ZNF740 JASPAR yes 112501204
chr19 13126130 13126140 MZF1 JASPAR yes 70807584
chr19 13126130 13126140 MZF1 JASPAR yes 112501205
chr19 13126138 13126150 TAL1 JASPAR yes 70807585
chr19 13126138 13126150 TAL1 JASPAR yes 112501206
chr19 13126139 13126151 NHLH1 JASPAR yes 70807586
chr19 13126139 13126151 NHLH1 JASPAR yes 112501207
chr19 13126140 13126150 TFAP4 JASPAR yes 70807587
chr19 13126140 13126150 TFAP4 JASPAR yes 112501208
chr19 13126159 13126180 ZNF263 JASPAR yes 70807588
chr19 13126159 13126180 ZNF263 JASPAR yes 112501209
chr19 13126160 13126165 ETS2 TRANSFAC yes 70807589
chr19 13126160 13126165 ETS2 TRANSFAC yes 112501210
chr19 13126160 13126172 INSM1 JASPAR yes 70807590
chr19 13126160 13126172 INSM1 JASPAR yes 112501211
chr19 13126175 13126185 SP1 JASPAR yes 70807591
chr19 13126175 13126185 SP1 JASPAR yes 112501212
chr19 13126193 13126201 EHF JASPAR yes 70807592
chr19 13126193 13126201 EHF JASPAR yes 112501213
chr19 13126206 13126215 SP1 TRANSFAC yes 70807593
chr19 13126206 13126215 SP1 TRANSFAC yes 112501214
chr19 13126207 13126213 SP1 TRANSFAC yes 70807594
chr19 13126207 13126213 SP1 TRANSFAC yes 112501215
chr19 13126207 13126217 SP1 JASPAR yes 70807595
chr19 13126207 13126217 SP1 JASPAR yes 112501216
chr19 13126208 13126215 SP1 TRANSFAC yes 70807596
chr19 13126208 13126215 SP1 TRANSFAC yes 112501217
chr19 13126209 13126214 SP1 TRANSFAC yes 70807597
chr19 13126209 13126214 SP1 TRANSFAC yes 112501218
chr19 13126209 13126215 SP1 TRANSFAC yes 70807598
chr19 13126209 13126215 SP1 TRANSFAC yes 112501219
chr19 13126247 13126262 PRDM1 JASPAR yes 70807599
chr19 13126247 13126262 PRDM1 JASPAR yes 112501220
chr19 13126276 13126297 ZNF263 JASPAR yes 70807600
chr19 13126276 13126297 ZNF263 JASPAR yes 112501221
SNP sites on vista28672[chr19:13125867-13126278]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 13125974 rs541645834 C A,T no 5448108
chr19 13126010 rs141097445 CT C
IRF1 STAT2 ZNF263
5448109
chr19 13126010 rs566845068 CT C
IRF1 STAT2 ZNF263
5448110
chr19 13126234 rs75817104 C G no 5448111
Genes possibly regulated by vista28672[chr19:13125867-13126278]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 13009600 13030090 - SYCE2 ENSG00000161860.7 13030090 0.77 0.99 17105 4223
chr19 13033293 13044851 - FARSA ENSG00000179115.6 13044851 0.79 1.0 17106 18984
chr19 13049392 13055303 + CALR ENSG00000179218.9 13049392 0.69 0.99 17107 23525
chr19 13056669 13064456 + RAD23A ENSG00000179262.5 13056669 0.55 1.0 17108 30802
chr19 13064972 13068050 - GADD45GIP1 ENSG00000179271.1 13068050 0.7 0.99 17109 42183
chr19 13075973 13085567 + DAND5 ENSG00000179284.4 13075973 0.96 0.84 17110 50106
chr19 13106422 13209610 + NFIX ENSG00000008441.12 13106422 0.8 0.99 17111 80555
chr19 13209847 13213975 - LYL1 ENSG00000104903.4 13213975 0.92 0.93 17112 12303
Expression level of Genes
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miRNAs possibly regulated by vista28672[chr19:13125867-13126278]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results