EnhancerDB
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  3. vista28673[chr19:13129050-13129163]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28673[chr19:13129050-13129163]
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Tissue distribution of vista28673
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Transcription factor that possibly regulate vista28673[chr19:13129050-13129163]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 13129045 13129060 TFAP2C JASPAR yes 70807601
chr19 13129045 13129060 TFAP2C JASPAR yes 112501652
chr19 13129063 13129067 YY1 TRANSFAC yes 70807602
chr19 13129063 13129067 YY1 TRANSFAC yes 112501653
chr19 13129080 13129098 NFYA JASPAR yes 70807603
chr19 13129080 13129098 NFYA JASPAR yes 112501654
chr19 13129090 13129104 TLX1 JASPAR yes 70807604
chr19 13129090 13129104 TLX1 JASPAR yes 112501655
chr19 13129091 13129105 TLX1 JASPAR yes 70807605
chr19 13129091 13129105 TLX1 JASPAR yes 112501656
chr19 13129129 13129150 ZNF263 JASPAR yes 70807606
chr19 13129129 13129150 ZNF263 JASPAR yes 112501657
chr19 13129134 13129155 ZNF263 JASPAR yes 70807607
chr19 13129134 13129155 ZNF263 JASPAR yes 112501658
chr19 13129137 13129148 FLI1 JASPAR yes 70807608
chr19 13129137 13129148 FLI1 JASPAR yes 112501659
chr19 13129137 13129158 ZNF263 JASPAR yes 70807609
chr19 13129137 13129158 ZNF263 JASPAR yes 112501660
chr19 13129138 13129143 ETS2 TRANSFAC yes 70807610
chr19 13129138 13129143 ETS2 TRANSFAC yes 112501661
chr19 13129138 13129146 EHF JASPAR yes 70807611
chr19 13129138 13129146 EHF JASPAR yes 112501662
chr19 13129138 13129159 ZNF263 JASPAR yes 70807612
chr19 13129138 13129159 ZNF263 JASPAR yes 112501663
chr19 13129140 13129161 ZNF263 JASPAR yes 70807613
chr19 13129140 13129161 ZNF263 JASPAR yes 112501664
chr19 13129141 13129162 ZNF263 JASPAR yes 70807614
chr19 13129141 13129162 ZNF263 JASPAR yes 112501665
chr19 13129143 13129153 SP1 JASPAR yes 70807615
chr19 13129143 13129153 SP1 JASPAR yes 112501666
chr19 13129143 13129163 RREB1 JASPAR yes 70807616
chr19 13129143 13129163 RREB1 JASPAR yes 112501667
chr19 13129143 13129164 ZNF263 JASPAR yes 70807617
chr19 13129143 13129164 ZNF263 JASPAR yes 112501668
chr19 13129144 13129152 SP1 TRANSFAC yes 70807618
chr19 13129144 13129152 SP1 TRANSFAC yes 112501669
chr19 13129144 13129164 RREB1 JASPAR yes 70807619
chr19 13129144 13129164 RREB1 JASPAR yes 112501670
chr19 13129144 13129165 ZNF263 JASPAR yes 70807620
chr19 13129144 13129165 ZNF263 JASPAR yes 112501671
chr19 13129145 13129150 SP1 TRANSFAC yes 70807621
chr19 13129145 13129150 SP1 TRANSFAC yes 112501672
chr19 13129145 13129156 E2F4 JASPAR yes 70807622
chr19 13129145 13129156 E2F4 JASPAR yes 112501673
chr19 13129145 13129165 RREB1 JASPAR yes 70807623
chr19 13129145 13129165 RREB1 JASPAR yes 112501674
chr19 13129146 13129151 SP1 TRANSFAC yes 70807624
chr19 13129146 13129151 SP1 TRANSFAC yes 112501675
chr19 13129146 13129152 SP1 TRANSFAC yes 70807625
chr19 13129146 13129152 SP1 TRANSFAC yes 112501676
chr19 13129146 13129156 SP1 JASPAR yes 70807626
chr19 13129146 13129156 SP1 JASPAR yes 112501677
chr19 13129147 13129157 ZNF740 JASPAR yes 70807627
chr19 13129147 13129157 ZNF740 JASPAR yes 112501678
chr19 13129147 13129167 RREB1 JASPAR yes 70807628
chr19 13129147 13129167 RREB1 JASPAR yes 112501679
chr19 13129148 13129158 SP1 JASPAR yes 70807629
chr19 13129148 13129158 ZNF740 JASPAR yes 70807630
chr19 13129148 13129158 SP1 JASPAR yes 112501680
chr19 13129148 13129158 ZNF740 JASPAR yes 112501681
chr19 13129149 13129159 SP1 JASPAR yes 70807631
chr19 13129149 13129159 ZNF740 JASPAR yes 70807632
chr19 13129149 13129159 SP1 JASPAR yes 112501682
chr19 13129149 13129159 ZNF740 JASPAR yes 112501683
chr19 13129150 13129160 SP1 JASPAR yes 70807633
chr19 13129150 13129160 ZNF740 JASPAR yes 70807634
chr19 13129150 13129160 SP1 JASPAR yes 112501684
chr19 13129150 13129160 ZNF740 JASPAR yes 112501685
chr19 13129151 13129161 SP1 JASPAR yes 70807635
chr19 13129151 13129161 ZNF740 JASPAR yes 70807636
chr19 13129151 13129161 SP1 JASPAR yes 112501686
chr19 13129151 13129161 ZNF740 JASPAR yes 112501687
chr19 13129152 13129162 SP1 JASPAR yes 70807637
chr19 13129152 13129162 ZNF740 JASPAR yes 70807638
chr19 13129152 13129162 SP1 JASPAR yes 112501688
chr19 13129152 13129162 ZNF740 JASPAR yes 112501689
chr19 13129152 13129167 NR2C2 JASPAR yes 70807639
chr19 13129152 13129167 NR2C2 JASPAR yes 112501690
chr19 13129153 13129163 SP1 JASPAR yes 70807640
chr19 13129153 13129163 ZNF740 JASPAR yes 70807641
chr19 13129153 13129163 SP1 JASPAR yes 112501691
chr19 13129153 13129163 ZNF740 JASPAR yes 112501692
chr19 13129154 13129164 SP1 JASPAR yes 70807642
chr19 13129154 13129164 ZNF740 JASPAR yes 70807643
chr19 13129154 13129164 SP1 JASPAR yes 112501693
chr19 13129154 13129164 ZNF740 JASPAR yes 112501694
chr19 13129155 13129165 SP1 JASPAR yes 70807644
chr19 13129155 13129165 ZNF740 JASPAR yes 70807645
chr19 13129155 13129165 SP1 JASPAR yes 112501695
chr19 13129155 13129165 ZNF740 JASPAR yes 112501696
chr19 13129156 13129166 ZNF740 JASPAR yes 70807646
chr19 13129156 13129166 ZNF740 JASPAR yes 112501697
chr19 13129161 13129171 SP1 JASPAR yes 70807647
chr19 13129161 13129171 SP1 JASPAR yes 112501698
SNP sites on vista28673[chr19:13129050-13129163]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28673[chr19:13129050-13129163]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 13009600 13030090 - SYCE2 ENSG00000161860.7 13030090 0.77 0.99 17105 1040
chr19 13033293 13044851 - FARSA ENSG00000179115.6 13044851 0.79 1.0 17106 15801
chr19 13049392 13055303 + CALR ENSG00000179218.9 13049392 0.69 0.99 17107 20342
chr19 13056669 13064456 + RAD23A ENSG00000179262.5 13056669 0.55 1.0 17108 27619
chr19 13064972 13068050 - GADD45GIP1 ENSG00000179271.1 13068050 0.7 0.99 17109 39000
chr19 13075973 13085567 + DAND5 ENSG00000179284.4 13075973 0.96 0.84 17110 46923
chr19 13106422 13209610 + NFIX ENSG00000008441.12 13106422 0.8 0.99 17111 77372
chr19 13209847 13213975 - LYL1 ENSG00000104903.4 13213975 0.92 0.93 17112 15188
chr19 13215716 13228381 - TRMT1 ENSG00000104907.8 13228381 0.6 1.0 17113 782
chr19 13228917 13251955 + NACC1 ENSG00000160877.5 13228917 0.67 1.0 17114 246
Expression level of Genes
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miRNAs possibly regulated by vista28673[chr19:13129050-13129163]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results