EnhancerDB
  1. Home
  2. Enhancers
  3. vista28674[chr19:13133010-13133371]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28674[chr19:13133010-13133371]
Back to top
Tissue distribution of vista28674
Back to top
Transcription factor that possibly regulate vista28674[chr19:13133010-13133371]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 13133012 13133017 SP1 TRANSFAC yes 70807648
chr19 13133024 13133032 MEIS3 JASPAR yes 70807649
chr19 13133032 13133047 MEF2A JASPAR yes 70807650
chr19 13133033 13133048 MEF2C JASPAR yes 70807651
chr19 13133034 13133046 MEF2A JASPAR yes 70807652
chr19 13133036 13133040 YY1 TRANSFAC yes 70807653
chr19 13133048 13133062 STAT1 JASPAR yes 70807654
chr19 13133049 13133064 IRF9 JASPAR yes 70807655
chr19 13133080 13133089 NFIX JASPAR yes 70807656
chr19 13133081 13133087 NFIC JASPAR yes 70807657
chr19 13133105 13133125 RREB1 JASPAR yes 70807658
chr19 13133114 13133124 SP1 JASPAR yes 70807659
chr19 13133147 13133161 GLIS3 JASPAR yes 70807660
chr19 13133148 13133160 INSM1 JASPAR yes 70807661
chr19 13133153 13133163 SP1 JASPAR yes 70807662
chr19 13133153 13133174 ZNF263 JASPAR yes 70807663
chr19 13133154 13133175 ZNF263 JASPAR yes 70807664
chr19 13133155 13133167 INSM1 JASPAR yes 70807665
chr19 13133163 13133184 ZNF263 JASPAR yes 70807666
chr19 13133167 13133188 ZNF263 JASPAR yes 70807667
chr19 13133169 13133175 MAZ TRANSFAC yes 70807668
chr19 13133174 13133188 GLIS2 JASPAR yes 70807669
chr19 13133174 13133188 GLIS3 JASPAR yes 70807670
chr19 13133234 13133251 RARA JASPAR yes 70807671
chr19 13133235 13133239 LFA1 TRANSFAC yes 70807672
chr19 13133237 13133256 CTCF JASPAR yes 70807673
chr19 13133243 13133261 ESR1 JASPAR yes 70807674
chr19 13133249 13133270 REST JASPAR yes 70807675
chr19 13133260 13133264 LFA1 TRANSFAC yes 70807676
chr19 13133324 13133328 YY1 TRANSFAC yes 70807677
chr19 13133326 13133341 MEF2A JASPAR yes 70807678
chr19 13133327 13133342 MEF2C JASPAR yes 70807679
chr19 13133328 13133340 MEF2B JASPAR yes 70807680
chr19 13133356 13133371 RFX5 JASPAR yes 70807681
SNP sites on vista28674[chr19:13133010-13133371]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 13133110 rs533013202 T TGTGC
RREB1
5448159
chr19 13133155 rs116251687 G A
GLIS3 INSM1 SP1 ZNF263
5448160
chr19 13133365 rs576278540 C T
RFX5
5448161
Genes possibly regulated by vista28674[chr19:13133010-13133371]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 13033293 13044851 - FARSA ENSG00000179115.6 13044851 0.79 1.0 17106 11841
chr19 13049392 13055303 + CALR ENSG00000179218.9 13049392 0.69 0.99 17107 16382
chr19 13056669 13064456 + RAD23A ENSG00000179262.5 13056669 0.55 1.0 17108 23659
chr19 13064972 13068050 - GADD45GIP1 ENSG00000179271.1 13068050 0.7 0.99 17109 35040
chr19 13075973 13085567 + DAND5 ENSG00000179284.4 13075973 0.96 0.84 17110 42963
chr19 13106422 13209610 + NFIX ENSG00000008441.12 13106422 0.8 0.99 17111 73412
chr19 13209847 13213975 - LYL1 ENSG00000104903.4 13213975 0.92 0.93 17112 19396
chr19 13215716 13228381 - TRMT1 ENSG00000104907.8 13228381 0.6 1.0 17113 4990
chr19 13228917 13251955 + NACC1 ENSG00000160877.5 13228917 0.67 1.0 17114 4454
Expression level of Genes
Back to top
miRNAs possibly regulated by vista28674[chr19:13133010-13133371]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results