EnhancerDB
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  3. vista28679[chr19:13144758-13144905]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28679[chr19:13144758-13144905]
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Tissue distribution of vista28679
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Transcription factor that possibly regulate vista28679[chr19:13144758-13144905]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 13144869 13145489 CTCF UCSC Txn Factor no Conserved 108387590
chr19 13144903 13145188 RAD21 UCSC Txn Factor no Conserved 108387595
chr19 13144777 13144781 LFA1 TRANSFAC yes 70807874
chr19 13144777 13144781 LFA1 TRANSFAC yes 112503015
chr19 13144788 13144799 DMRT3 JASPAR yes 70807875
chr19 13144788 13144799 DMRT3 JASPAR yes 112503016
chr19 13144791 13144796 GATA1 TRANSFAC yes 70807876
chr19 13144791 13144796 GATA1 TRANSFAC yes 112503017
chr19 13144827 13144835 MEIS2 JASPAR yes 70807877
chr19 13144827 13144835 MEIS3 JASPAR yes 70807878
chr19 13144827 13144835 MEIS2 JASPAR yes 112503018
chr19 13144827 13144835 MEIS3 JASPAR yes 112503019
chr19 13144833 13144848 HNF4A JASPAR yes 70807879
chr19 13144833 13144848 HNF4A JASPAR yes 112503020
chr19 13144842 13144846 ESR1 TRANSFAC yes 70807880
chr19 13144842 13144846 ESR1 TRANSFAC yes 112503021
chr19 13144842 13144853 USF1 JASPAR yes 70807881
chr19 13144842 13144853 USF2 JASPAR yes 70807882
chr19 13144842 13144853 USF1 JASPAR yes 112503022
chr19 13144842 13144853 USF2 JASPAR yes 112503023
chr19 13144843 13144853 SREBF2 JASPAR yes 70807883
chr19 13144843 13144853 TFE3 JASPAR yes 70807884
chr19 13144843 13144853 TFEB JASPAR yes 70807885
chr19 13144843 13144853 TFEC JASPAR yes 70807886
chr19 13144843 13144853 SREBF2 JASPAR yes 112503024
chr19 13144843 13144853 TFE3 JASPAR yes 112503025
chr19 13144843 13144853 TFEB JASPAR yes 112503026
chr19 13144843 13144853 TFEC JASPAR yes 112503027
chr19 13144868 13144873 SP1 TRANSFAC yes 70807887
chr19 13144868 13144873 SP1 TRANSFAC yes 112503028
chr19 13144868 13144875 SP1 TRANSFAC yes 70807888
chr19 13144868 13144875 SP1 TRANSFAC yes 112503029
chr19 13144877 13144887 RORA JASPAR yes 70807889
chr19 13144877 13144887 RORA JASPAR yes 112503030
chr19 13144878 13144889 ESRRB JASPAR yes 70807890
chr19 13144878 13144889 ESRRB JASPAR yes 112503031
chr19 13144879 13144897 ESR2 JASPAR yes 70807891
chr19 13144879 13144897 ESR2 JASPAR yes 112503032
chr19 13144881 13144896 ESR2 JASPAR yes 70807892
chr19 13144881 13144896 ESR2 JASPAR yes 112503033
chr19 13144882 13144886 ESR1 TRANSFAC yes 70807893
chr19 13144882 13144886 ESR1 TRANSFAC yes 112503034
chr19 13144882 13144897 AR JASPAR yes 70807894
chr19 13144882 13144897 AR JASPAR yes 112503035
chr19 13144899 13144916 RARA JASPAR yes 70807895
chr19 13144899 13144916 RARA JASPAR yes 112503036
SNP sites on vista28679[chr19:13144758-13144905]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28679[chr19:13144758-13144905]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 13033293 13044851 - FARSA ENSG00000179115.6 13044851 0.79 1.0 17106 93
chr19 13049392 13055303 + CALR ENSG00000179218.9 13049392 0.69 0.99 17107 4634
chr19 13056669 13064456 + RAD23A ENSG00000179262.5 13056669 0.55 1.0 17108 11911
chr19 13064972 13068050 - GADD45GIP1 ENSG00000179271.1 13068050 0.7 0.99 17109 23292
chr19 13075973 13085567 + DAND5 ENSG00000179284.4 13075973 0.96 0.84 17110 31215
chr19 13106422 13209610 + NFIX ENSG00000008441.12 13106422 0.8 0.99 17111 61664
chr19 13209847 13213975 - LYL1 ENSG00000104903.4 13213975 0.92 0.93 17112 30930
chr19 13215716 13228381 - TRMT1 ENSG00000104907.8 13228381 0.6 1.0 17113 16524
chr19 13228917 13251955 + NACC1 ENSG00000160877.5 13228917 0.67 1.0 17114 15988
Expression level of Genes
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miRNAs possibly regulated by vista28679[chr19:13144758-13144905]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results