EnhancerDB
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  3. vista28680[chr19:13147424-13147812]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28680[chr19:13147424-13147812]
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Tissue distribution of vista28680
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Transcription factor that possibly regulate vista28680[chr19:13147424-13147812]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 13147013 13147614 CTCF UCSC Txn Factor no Conserved 108387601
chr19 13147411 13147425 EBF1 JASPAR yes 70807896
chr19 13147411 13147425 EBF1 JASPAR yes 112503451
chr19 13147411 13147426 TFAP2A JASPAR yes 70807897
chr19 13147411 13147426 TFAP2C JASPAR yes 70807898
chr19 13147411 13147426 TFAP2A JASPAR yes 112503452
chr19 13147411 13147426 TFAP2C JASPAR yes 112503453
chr19 13147442 13147446 NFE TRANSFAC yes 70807899
chr19 13147442 13147446 NFE TRANSFAC yes 112503457
chr19 13147450 13147455 GATA2 JASPAR yes 70807900
chr19 13147450 13147455 GATA2 JASPAR yes 112503458
chr19 13147452 13147458 MZF1 JASPAR yes 70807901
chr19 13147452 13147458 MZF1 JASPAR yes 112503459
chr19 13147456 13147460 YY1 TRANSFAC yes 70807902
chr19 13147456 13147460 YY1 TRANSFAC yes 112503460
chr19 13147469 13147480 NFIL3 JASPAR yes 70807903
chr19 13147469 13147480 NFIL3 JASPAR yes 112503461
chr19 13147470 13147482 DBP JASPAR yes 70807904
chr19 13147470 13147482 HLF JASPAR yes 70807905
chr19 13147470 13147482 TEF JASPAR yes 70807906
chr19 13147470 13147482 DBP JASPAR yes 112503462
chr19 13147470 13147482 HLF JASPAR yes 112503463
chr19 13147470 13147482 TEF JASPAR yes 112503464
chr19 13147472 13147483 NFIL3 JASPAR yes 70807907
chr19 13147472 13147483 NFIL3 JASPAR yes 112503465
chr19 13147475 13147479 TEAD2 TRANSFAC yes 70807908
chr19 13147475 13147479 TEAD2 TRANSFAC yes 112503466
chr19 13147487 13147498 CEBPB JASPAR yes 70807909
chr19 13147487 13147498 CEBPB JASPAR yes 112503467
chr19 13147487 13147499 DBP JASPAR yes 70807910
chr19 13147487 13147499 HLF JASPAR yes 70807911
chr19 13147487 13147499 TEF JASPAR yes 70807912
chr19 13147487 13147499 DBP JASPAR yes 112503468
chr19 13147487 13147499 HLF JASPAR yes 112503469
chr19 13147487 13147499 TEF JASPAR yes 112503470
chr19 13147487 13147500 ATF4 JASPAR yes 70807913
chr19 13147487 13147500 ATF4 JASPAR yes 112503471
chr19 13147488 13147498 CEBPB JASPAR yes 70807914
chr19 13147488 13147498 CEBPD JASPAR yes 70807915
chr19 13147488 13147498 CEBPE JASPAR yes 70807916
chr19 13147488 13147498 CEBPG JASPAR yes 70807917
chr19 13147488 13147498 CEBPB JASPAR yes 112503472
chr19 13147488 13147498 CEBPD JASPAR yes 112503473
chr19 13147488 13147498 CEBPE JASPAR yes 112503474
chr19 13147488 13147498 CEBPG JASPAR yes 112503475
chr19 13147488 13147499 CEBPA JASPAR yes 70807918
chr19 13147488 13147499 CEBPA JASPAR yes 112503476
chr19 13147500 13147511 NFIL3 JASPAR yes 70807919
chr19 13147500 13147511 NFIL3 JASPAR yes 112503477
chr19 13147501 13147505 TEAD2 TRANSFAC yes 70807920
chr19 13147501 13147505 TEAD2 TRANSFAC yes 112503478
chr19 13147501 13147513 DBP JASPAR yes 70807921
chr19 13147501 13147513 HLF JASPAR yes 70807922
chr19 13147501 13147513 TEF JASPAR yes 70807923
chr19 13147501 13147513 DBP JASPAR yes 112503479
chr19 13147501 13147513 HLF JASPAR yes 112503480
chr19 13147501 13147513 TEF JASPAR yes 112503481
chr19 13147503 13147514 NFIL3 JASPAR yes 70807924
chr19 13147503 13147514 NFIL3 JASPAR yes 112503482
chr19 13147505 13147520 SCRT1 JASPAR yes 70807925
chr19 13147505 13147520 SCRT1 JASPAR yes 112503483
chr19 13147506 13147510 TEAD2 TRANSFAC yes 70807926
chr19 13147506 13147510 TEAD2 TRANSFAC yes 112503484
chr19 13147508 13147511 MYB TRANSFAC yes 70807927
chr19 13147508 13147511 MYB TRANSFAC yes 112503485
chr19 13147509 13147518 SNAI2 JASPAR yes 70807928
chr19 13147509 13147518 SNAI2 JASPAR yes 112503486
chr19 13147509 13147519 FIGLA JASPAR yes 70807929
chr19 13147509 13147519 MSC JASPAR yes 70807930
chr19 13147509 13147519 FIGLA JASPAR yes 112503487
chr19 13147509 13147519 MSC JASPAR yes 112503488
chr19 13147510 13147514 YY1 TRANSFAC yes 70807931
chr19 13147510 13147514 YY1 TRANSFAC yes 112503489
chr19 13147551 13147556 GATA2 JASPAR yes 70807932
chr19 13147551 13147556 GATA2 JASPAR yes 112503490
chr19 13147556 13147574 SRF JASPAR yes 70807933
chr19 13147556 13147574 SRF JASPAR yes 112503491
chr19 13147558 13147573 MEF2A JASPAR yes 70807934
chr19 13147558 13147573 MEF2C JASPAR yes 70807935
chr19 13147558 13147573 MEF2A JASPAR yes 112503492
chr19 13147558 13147573 MEF2C JASPAR yes 112503493
chr19 13147559 13147566 GATA1 TRANSFAC yes 70807936
chr19 13147559 13147566 GATA1 TRANSFAC yes 112503494
chr19 13147559 13147574 MEF2A JASPAR yes 70807937
chr19 13147559 13147574 MEF2A JASPAR yes 112503495
chr19 13147560 13147572 MEF2A JASPAR yes 70807938
chr19 13147560 13147572 MEF2B JASPAR yes 70807939
chr19 13147560 13147572 MEF2D JASPAR yes 70807940
chr19 13147560 13147572 MEF2A JASPAR yes 112503496
chr19 13147560 13147572 MEF2B JASPAR yes 112503497
chr19 13147560 13147572 MEF2D JASPAR yes 112503498
chr19 13147561 13147571 MEF2A JASPAR yes 70807941
chr19 13147561 13147571 MEF2A JASPAR yes 112503499
chr19 13147561 13147573 FOXI1 JASPAR yes 70807942
chr19 13147561 13147573 FOXI1 JASPAR yes 112503500
chr19 13147562 13147566 TEAD2 TRANSFAC yes 70807943
chr19 13147562 13147566 TEAD2 TRANSFAC yes 112503501
chr19 13147562 13147567 TBP TRANSFAC yes 70807944
chr19 13147562 13147567 TBP TRANSFAC yes 112503502
chr19 13147562 13147568 TMF TRANSFAC yes 70807945
chr19 13147562 13147568 TMF TRANSFAC yes 112503503
chr19 13147573 13147578 ETS2 TRANSFAC yes 70807946
chr19 13147573 13147578 ETS2 TRANSFAC yes 112503504
chr19 13147575 13147595 RREB1 JASPAR yes 70807947
chr19 13147575 13147595 RREB1 JASPAR yes 112503505
chr19 13147589 13147600 RUNX1 JASPAR yes 70807948
chr19 13147589 13147600 RUNX1 JASPAR yes 112503506
chr19 13147592 13147596 YY1 TRANSFAC yes 70807949
chr19 13147592 13147596 YY1 TRANSFAC yes 112503507
chr19 13147595 13147599 ESR1 TRANSFAC yes 70807950
chr19 13147595 13147599 ESR1 TRANSFAC yes 112503508
chr19 13147596 13147606 SREBF1 JASPAR yes 70807951
chr19 13147596 13147606 SREBF2 JASPAR yes 70807952
chr19 13147596 13147606 SREBF1 JASPAR yes 112503509
chr19 13147596 13147606 SREBF2 JASPAR yes 112503510
chr19 13147597 13147605 MGA JASPAR yes 70807953
chr19 13147597 13147605 MGA JASPAR yes 112503511
chr19 13147613 13147625 FOXI1 JASPAR yes 70807954
chr19 13147613 13147625 FOXI1 JASPAR yes 112503512
chr19 13147614 13147618 TEAD2 TRANSFAC yes 70807955
chr19 13147614 13147618 TEAD2 TRANSFAC yes 112503513
chr19 13147614 13147619 TBP TRANSFAC yes 70807956
chr19 13147614 13147619 TBP TRANSFAC yes 112503514
chr19 13147614 13147620 TMF TRANSFAC yes 70807957
chr19 13147614 13147620 TMF TRANSFAC yes 112503515
chr19 13147631 13147638 GATA1 TRANSFAC yes 70807958
chr19 13147631 13147638 GATA1 TRANSFAC yes 112503516
chr19 13147633 13147636 MYB TRANSFAC yes 70807959
chr19 13147633 13147636 MYB TRANSFAC yes 112503517
chr19 13147634 13147638 TEAD2 TRANSFAC yes 70807960
chr19 13147634 13147638 TEAD2 TRANSFAC yes 112503518
chr19 13147634 13147639 TBP TRANSFAC yes 70807961
chr19 13147634 13147639 TBP TRANSFAC yes 112503519
chr19 13147634 13147640 TMF TRANSFAC yes 70807962
chr19 13147634 13147640 TMF TRANSFAC yes 112503520
chr19 13147646 13147661 JUND JASPAR yes 70807963
chr19 13147646 13147661 JUND JASPAR yes 112503521
chr19 13147647 13147660 JUN JASPAR yes 70807964
chr19 13147647 13147660 JUN JASPAR yes 112503522
chr19 13147648 13147662 ATF7 JASPAR yes 70807965
chr19 13147648 13147662 BATF3 JASPAR yes 70807966
chr19 13147648 13147662 ATF7 JASPAR yes 112503523
chr19 13147648 13147662 BATF3 JASPAR yes 112503524
chr19 13147649 13147661 JDP2 JASPAR yes 70807967
chr19 13147649 13147661 JDP2 JASPAR yes 112503525
chr19 13147651 13147656 ATF1 TRANSFAC yes 70807968
chr19 13147651 13147656 ATF1 TRANSFAC yes 112503526
chr19 13147651 13147659 CREB1 JASPAR yes 70807969
chr19 13147651 13147659 CREB1 JASPAR yes 112503527
chr19 13147652 13147664 CREB1 JASPAR yes 70807970
chr19 13147652 13147664 CREB1 JASPAR yes 112503528
chr19 13147653 13147658 ATF1 TRANSFAC yes 70807971
chr19 13147653 13147658 ATF1 TRANSFAC yes 112503529
chr19 13147658 13147667 HIC2 JASPAR yes 70807972
chr19 13147658 13147667 HIC2 JASPAR yes 112503530
chr19 13147661 13147665 LFA1 TRANSFAC yes 70807973
chr19 13147661 13147665 LFA1 TRANSFAC yes 112503531
chr19 13147671 13147681 HMBOX1 JASPAR yes 70807974
chr19 13147671 13147681 HMBOX1 JASPAR yes 112503532
chr19 13147674 13147686 INSM1 JASPAR yes 70807975
chr19 13147674 13147686 INSM1 JASPAR yes 112503533
chr19 13147674 13147694 RREB1 JASPAR yes 70807976
chr19 13147674 13147694 RREB1 JASPAR yes 112503534
chr19 13147683 13147687 NFE TRANSFAC yes 70807977
chr19 13147683 13147687 NFE TRANSFAC yes 112503535
chr19 13147711 13147722 USF1 JASPAR yes 70807978
chr19 13147711 13147722 USF1 JASPAR yes 112503536
chr19 13147711 13147723 PKNOX2 JASPAR yes 70807979
chr19 13147711 13147723 PKNOX2 JASPAR yes 112503537
chr19 13147712 13147722 TFEB JASPAR yes 70807980
chr19 13147712 13147722 TFEC JASPAR yes 70807981
chr19 13147712 13147722 TFEB JASPAR yes 112503538
chr19 13147712 13147722 TFEC JASPAR yes 112503539
chr19 13147713 13147728 JUND JASPAR yes 70807982
chr19 13147713 13147728 JUND JASPAR yes 112503540
chr19 13147715 13147729 ATF7 JASPAR yes 70807983
chr19 13147715 13147729 BATF3 JASPAR yes 70807984
chr19 13147715 13147729 ATF7 JASPAR yes 112503541
chr19 13147715 13147729 BATF3 JASPAR yes 112503542
chr19 13147716 13147728 JDP2 JASPAR yes 70807985
chr19 13147716 13147728 JDP2 JASPAR yes 112503543
chr19 13147716 13147731 JUND JASPAR yes 70807986
chr19 13147716 13147731 JUND JASPAR yes 112503544
chr19 13147717 13147730 JUN JASPAR yes 70807987
chr19 13147717 13147730 JUN JASPAR yes 112503545
chr19 13147718 13147721 MYB TRANSFAC yes 70807988
chr19 13147718 13147721 MYB TRANSFAC yes 112503546
chr19 13147718 13147725 JUN TRANSFAC yes 70807989
chr19 13147718 13147725 JUN TRANSFAC yes 112503547
chr19 13147723 13147726 MYB TRANSFAC yes 70807990
chr19 13147723 13147726 MYB TRANSFAC yes 112503548
chr19 13147723 13147732 SOX9 JASPAR yes 70807991
chr19 13147723 13147732 SOX9 JASPAR yes 112503549
chr19 13147723 13147742 RFX2 JASPAR yes 70807992
chr19 13147723 13147742 RFX2 JASPAR yes 112503550
chr19 13147725 13147734 SRY JASPAR yes 70807993
chr19 13147725 13147734 SRY JASPAR yes 112503551
chr19 13147725 13147737 FOXC2 JASPAR yes 70807994
chr19 13147725 13147737 FOXC2 JASPAR yes 112503552
chr19 13147727 13147738 FOXA1 JASPAR yes 70807995
chr19 13147727 13147738 FOXA1 JASPAR yes 112503553
chr19 13147727 13147743 RFX2 JASPAR yes 70807996
chr19 13147727 13147743 RFX3 JASPAR yes 70807997
chr19 13147727 13147743 RFX4 JASPAR yes 70807998
chr19 13147727 13147743 RFX5 JASPAR yes 70807999
chr19 13147727 13147743 RFX2 JASPAR yes 112503554
chr19 13147727 13147743 RFX3 JASPAR yes 112503555
chr19 13147727 13147743 RFX4 JASPAR yes 112503556
chr19 13147727 13147743 RFX5 JASPAR yes 112503557
chr19 13147728 13147747 RFX2 JASPAR yes 70808000
chr19 13147728 13147747 RFX2 JASPAR yes 112503558
chr19 13147730 13147735 ETS2 TRANSFAC yes 70808001
chr19 13147730 13147735 ETS2 TRANSFAC yes 112503559
chr19 13147730 13147745 RFX5 JASPAR yes 70808002
chr19 13147730 13147745 RFX5 JASPAR yes 112503560
chr19 13147738 13147741 MYB TRANSFAC yes 70808003
chr19 13147738 13147741 MYB TRANSFAC yes 112503561
chr19 13147739 13147751 TEAD1 JASPAR yes 70808004
chr19 13147739 13147751 TEAD1 JASPAR yes 112503562
chr19 13147742 13147750 TEAD3 JASPAR yes 70808005
chr19 13147742 13147750 TEAD3 JASPAR yes 112503563
chr19 13147748 13147762 EBF1 JASPAR yes 70808006
chr19 13147748 13147762 EBF1 JASPAR yes 112503564
chr19 13147754 13147775 ZNF263 JASPAR yes 70808007
chr19 13147754 13147775 ZNF263 JASPAR yes 112503565
chr19 13147781 13147802 ZNF263 JASPAR yes 70808008
chr19 13147781 13147802 ZNF263 JASPAR yes 112503566
chr19 13147784 13147805 ZNF263 JASPAR yes 70808009
chr19 13147784 13147805 ZNF263 JASPAR yes 112503567
chr19 13147797 13147802 GATA2 JASPAR yes 70808010
chr19 13147797 13147802 GATA2 JASPAR yes 112503568
chr19 13147801 13147821 RREB1 JASPAR yes 70808011
chr19 13147801 13147821 RREB1 JASPAR yes 112503569
SNP sites on vista28680[chr19:13147424-13147812]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 13147537 rs112550482 G T
CTCF
5448273
Genes possibly regulated by vista28680[chr19:13147424-13147812]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 13049392 13055303 + CALR ENSG00000179218.9 13049392 0.69 0.99 17107 1968
chr19 13056669 13064456 + RAD23A ENSG00000179262.5 13056669 0.55 1.0 17108 9245
chr19 13064972 13068050 - GADD45GIP1 ENSG00000179271.1 13068050 0.7 0.99 17109 20626
chr19 13075973 13085567 + DAND5 ENSG00000179284.4 13075973 0.96 0.84 17110 28549
chr19 13106422 13209610 + NFIX ENSG00000008441.12 13106422 0.8 0.99 17111 58998
chr19 13209847 13213975 - LYL1 ENSG00000104903.4 13213975 0.92 0.93 17112 33837
chr19 13215716 13228381 - TRMT1 ENSG00000104907.8 13228381 0.6 1.0 17113 19431
chr19 13228917 13251955 + NACC1 ENSG00000160877.5 13228917 0.67 1.0 17114 18895
Expression level of Genes
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miRNAs possibly regulated by vista28680[chr19:13147424-13147812]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results