EnhancerDB
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  3. vista28683[chr19:13155029-13155515]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28683[chr19:13155029-13155515]
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Tissue distribution of vista28683
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Transcription factor that possibly regulate vista28683[chr19:13155029-13155515]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 13155044 13155065 ZNF263 JASPAR yes 70808074
chr19 13155044 13155065 ZNF263 JASPAR yes 112504643
chr19 13155045 13155066 ZNF263 JASPAR yes 70808075
chr19 13155045 13155066 ZNF263 JASPAR yes 112504644
chr19 13155059 13155064 ETS2 TRANSFAC yes 70808076
chr19 13155059 13155064 ETS2 TRANSFAC yes 112504645
chr19 13155069 13155084 RUNX2 JASPAR yes 70808077
chr19 13155069 13155084 RUNX2 JASPAR yes 112504646
chr19 13155085 13155097 GLI2 JASPAR yes 70808078
chr19 13155085 13155097 GLI2 JASPAR yes 112504647
chr19 13155093 13155099 YY1 JASPAR yes 70808079
chr19 13155093 13155099 YY1 JASPAR yes 112504648
chr19 13155096 13155103 POU2F1 TRANSFAC yes 70808080
chr19 13155096 13155103 POU2F1 TRANSFAC yes 112504649
chr19 13155102 13155112 SMAD3 JASPAR yes 70808081
chr19 13155102 13155112 SMAD3 JASPAR yes 112504650
chr19 13155113 13155128 RFX5 JASPAR yes 70808082
chr19 13155113 13155128 RFX5 JASPAR yes 112504651
chr19 13155133 13155138 SP1 TRANSFAC yes 70808083
chr19 13155133 13155138 SP1 TRANSFAC yes 112504652
chr19 13155139 13155151 BHLHE23 JASPAR yes 70808084
chr19 13155139 13155151 BHLHE23 JASPAR yes 112504653
chr19 13155140 13155150 BHLHE22 JASPAR yes 70808085
chr19 13155140 13155150 NEUROD2 JASPAR yes 70808086
chr19 13155140 13155150 OLIG1 JASPAR yes 70808087
chr19 13155140 13155150 OLIG2 JASPAR yes 70808088
chr19 13155140 13155150 OLIG3 JASPAR yes 70808089
chr19 13155140 13155150 BHLHE22 JASPAR yes 112504654
chr19 13155140 13155150 NEUROD2 JASPAR yes 112504655
chr19 13155140 13155150 OLIG1 JASPAR yes 112504656
chr19 13155140 13155150 OLIG2 JASPAR yes 112504657
chr19 13155140 13155150 OLIG3 JASPAR yes 112504658
chr19 13155170 13155177 SPIB JASPAR yes 70808090
chr19 13155170 13155177 SPIB JASPAR yes 112504659
chr19 13155170 13155189 REST JASPAR yes 70808091
chr19 13155170 13155189 REST JASPAR yes 112504660
chr19 13155173 13155187 ZIC1 JASPAR yes 70808092
chr19 13155173 13155187 ZIC1 JASPAR yes 112504661
chr19 13155187 13155194 PEA3 TRANSFAC yes 70808093
chr19 13155187 13155194 PEA3 TRANSFAC yes 112504662
chr19 13155197 13155200 MYB TRANSFAC yes 70808094
chr19 13155197 13155200 MYB TRANSFAC yes 112504663
chr19 13155200 13155211 GCM1 JASPAR yes 70808095
chr19 13155200 13155211 GCM1 JASPAR yes 112504664
chr19 13155208 13155223 RUNX2 JASPAR yes 70808096
chr19 13155208 13155223 RUNX2 JASPAR yes 112504665
chr19 13155210 13155230 RREB1 JASPAR yes 70808097
chr19 13155210 13155230 RREB1 JASPAR yes 112504666
chr19 13155236 13155241 SP1 TRANSFAC yes 70808098
chr19 13155236 13155241 SP1 TRANSFAC yes 112504667
chr19 13155237 13155257 PPARG JASPAR yes 70808099
chr19 13155237 13155257 PPARG JASPAR yes 112504668
chr19 13155250 13155267 ZNF410 JASPAR yes 70808100
chr19 13155250 13155267 ZNF410 JASPAR yes 112504669
chr19 13155253 13155273 RREB1 JASPAR yes 70808101
chr19 13155253 13155273 RREB1 JASPAR yes 112504670
chr19 13155255 13155275 RREB1 JASPAR yes 70808102
chr19 13155255 13155275 RREB1 JASPAR yes 112504671
chr19 13155276 13155280 TEAD2 TRANSFAC yes 70808103
chr19 13155276 13155280 TEAD2 TRANSFAC yes 112504672
chr19 13155276 13155281 TBP TRANSFAC yes 70808104
chr19 13155276 13155281 TBP TRANSFAC yes 112504673
chr19 13155276 13155282 TMF TRANSFAC yes 70808105
chr19 13155276 13155282 TMF TRANSFAC yes 112504674
chr19 13155278 13155296 MAFF JASPAR yes 70808106
chr19 13155278 13155296 MAFF JASPAR yes 112504675
chr19 13155279 13155294 MAFK JASPAR yes 70808107
chr19 13155279 13155294 MAFK JASPAR yes 112504676
chr19 13155290 13155303 EOMES JASPAR yes 70808108
chr19 13155290 13155303 EOMES JASPAR yes 112504677
chr19 13155292 13155302 TBR1 JASPAR yes 70808109
chr19 13155292 13155302 TBR1 JASPAR yes 112504678
chr19 13155292 13155303 TBX20 JASPAR yes 70808110
chr19 13155292 13155303 TBX2 JASPAR yes 70808111
chr19 13155292 13155303 TBX20 JASPAR yes 112504679
chr19 13155292 13155303 TBX2 JASPAR yes 112504680
chr19 13155293 13155303 TBX21 JASPAR yes 70808112
chr19 13155293 13155303 TBX21 JASPAR yes 112504681
chr19 13155294 13155302 MGA JASPAR yes 70808113
chr19 13155294 13155302 TBX15 JASPAR yes 70808114
chr19 13155294 13155302 TBX1 JASPAR yes 70808115
chr19 13155294 13155302 TBX4 JASPAR yes 70808116
chr19 13155294 13155302 TBX5 JASPAR yes 70808117
chr19 13155294 13155302 MGA JASPAR yes 112504682
chr19 13155294 13155302 TBX15 JASPAR yes 112504683
chr19 13155294 13155302 TBX1 JASPAR yes 112504684
chr19 13155294 13155302 TBX4 JASPAR yes 112504685
chr19 13155294 13155302 TBX5 JASPAR yes 112504686
chr19 13155312 13155319 SPIB JASPAR yes 70808118
chr19 13155312 13155319 SPIB JASPAR yes 112504687
chr19 13155386 13155390 LFA1 TRANSFAC yes 70808119
chr19 13155386 13155390 LFA1 TRANSFAC yes 112504688
chr19 13155402 13155405 MYB TRANSFAC yes 70808120
chr19 13155402 13155405 MYB TRANSFAC yes 112504689
chr19 13155402 13155416 NR2F1 JASPAR yes 70808121
chr19 13155402 13155416 NR2F1 JASPAR yes 112504690
chr19 13155427 13155442 RUNX2 JASPAR yes 70808122
chr19 13155427 13155442 RUNX2 JASPAR yes 112504691
chr19 13155447 13155458 FOS JASPAR yes 70808123
chr19 13155447 13155458 FOSL1 JASPAR yes 70808124
chr19 13155447 13155458 JUND JASPAR yes 70808125
chr19 13155447 13155458 FOS JASPAR yes 112504692
chr19 13155447 13155458 FOSL1 JASPAR yes 112504693
chr19 13155447 13155458 JUND JASPAR yes 112504694
chr19 13155449 13155456 JUN TRANSFAC yes 70808126
chr19 13155449 13155456 JUN TRANSFAC yes 112504695
chr19 13155473 13155485 TGIF1 JASPAR yes 70808127
chr19 13155473 13155485 TGIF2 JASPAR yes 70808128
chr19 13155473 13155485 TGIF1 JASPAR yes 112504696
chr19 13155473 13155485 TGIF2 JASPAR yes 112504697
chr19 13155484 13155495 NFKB1 JASPAR yes 70808129
chr19 13155484 13155495 NFKB1 JASPAR yes 112504698
chr19 13155502 13155514 NHLH1 JASPAR yes 70808130
chr19 13155502 13155514 NHLH1 JASPAR yes 112504699
chr19 13155503 13155513 NHLH1 JASPAR yes 70808131
chr19 13155503 13155513 NHLH1 JASPAR yes 112504700
SNP sites on vista28683[chr19:13155029-13155515]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 13155041 rs190787396 G A no 5448350
chr19 13155072 rs10410423 G A
RUNX2
5448351
chr19 13155405 rs10418716 A C,T
MYB NR2F1
5448352
chr19 13155437 rs149156544 G T
RUNX2
5448353
chr19 13155495 rs560880859 C T
NFKB1
5448354
Genes possibly regulated by vista28683[chr19:13155029-13155515]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 13056669 13064456 + RAD23A ENSG00000179262.5 13056669 0.55 1.0 17108 1640
chr19 13064972 13068050 - GADD45GIP1 ENSG00000179271.1 13068050 0.7 0.99 17109 13021
chr19 13075973 13085567 + DAND5 ENSG00000179284.4 13075973 0.96 0.84 17110 20944
chr19 13106422 13209610 + NFIX ENSG00000008441.12 13106422 0.8 0.99 17111 51393
chr19 13209847 13213975 - LYL1 ENSG00000104903.4 13213975 0.92 0.93 17112 41540
chr19 13215716 13228381 - TRMT1 ENSG00000104907.8 13228381 0.6 1.0 17113 27134
chr19 13228917 13251955 + NACC1 ENSG00000160877.5 13228917 0.67 1.0 17114 26598
Expression level of Genes
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miRNAs possibly regulated by vista28683[chr19:13155029-13155515]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results