EnhancerDB
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  3. vista28691[chr19:13231642-13232105]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28691[chr19:13231642-13232105]
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Tissue distribution of vista28691
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Transcription factor that possibly regulate vista28691[chr19:13231642-13232105]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 13231669 13231672 MYB TRANSFAC yes 70808536
chr19 13231712 13231716 LFA1 TRANSFAC yes 70808537
chr19 13231718 13231731 SCRT2 JASPAR yes 70808538
chr19 13231718 13231733 SCRT1 JASPAR yes 70808539
chr19 13231730 13231744 ZIC1 JASPAR yes 70808540
chr19 13231730 13231745 ZIC4 JASPAR yes 70808541
chr19 13231744 13231759 STAT2 JASPAR yes 70808542
chr19 13231751 13231755 YY1 TRANSFAC yes 70808543
chr19 13231753 13231772 REST JASPAR yes 70808544
chr19 13231770 13231784 ZIC1 JASPAR yes 70808545
chr19 13231770 13231785 ZIC3 JASPAR yes 70808546
chr19 13231770 13231785 ZIC4 JASPAR yes 70808547
chr19 13231774 13231788 GLIS2 JASPAR yes 70808548
chr19 13231781 13231791 SP1 JASPAR yes 70808549
chr19 13231787 13231792 TFAP2A TRANSFAC yes 70808550
chr19 13231787 13231793 MZF1 JASPAR yes 70808551
chr19 13231789 13231794 ETS2 TRANSFAC yes 70808552
chr19 13231805 13231808 MYB TRANSFAC yes 70808553
chr19 13231874 13231887 ELF3 JASPAR yes 70808554
chr19 13231879 13231894 FOXA1 JASPAR yes 70808555
chr19 13231880 13231895 FOXP1 JASPAR yes 70808556
chr19 13231881 13231892 FOXP2 JASPAR yes 70808557
chr19 13231881 13231893 FOXC2 JASPAR yes 70808558
chr19 13231882 13231890 FOXD1 JASPAR yes 70808559
chr19 13231882 13231890 FOXG1 JASPAR yes 70808560
chr19 13231882 13231890 FOXO3 JASPAR yes 70808561
chr19 13231882 13231893 FOXB1 JASPAR yes 70808562
chr19 13231883 13231890 FOXD2 JASPAR yes 70808563
chr19 13231883 13231890 FOXI1 JASPAR yes 70808564
chr19 13231883 13231890 FOXL1 JASPAR yes 70808565
chr19 13231883 13231890 FOXO4 JASPAR yes 70808566
chr19 13231883 13231890 FOXO6 JASPAR yes 70808567
chr19 13231883 13231890 FOXP3 JASPAR yes 70808568
chr19 13231883 13231891 FOXO3 JASPAR yes 70808569
chr19 13231883 13231894 FOXA1 JASPAR yes 70808570
chr19 13231888 13231894 SOX10 JASPAR yes 70808571
chr19 13231905 13231919 BATF3 JASPAR yes 70808572
chr19 13231911 13231921 MEOX2 JASPAR yes 70808573
chr19 13231914 13231918 YY1 TRANSFAC yes 70808574
chr19 13231921 13231934 TFAP2A JASPAR yes 70808575
chr19 13231921 13231938 ZNF410 JASPAR yes 70808576
chr19 13231929 13231939 SP1 JASPAR yes 70808577
chr19 13231931 13231941 MZF1 JASPAR yes 70808578
chr19 13231934 13231939 TFAP2A TRANSFAC yes 70808579
chr19 13231934 13231940 MZF1 JASPAR yes 70808580
chr19 13231935 13231955 RREB1 JASPAR yes 70808581
chr19 13231951 13231964 ELF1 JASPAR yes 70808582
chr19 13231952 13231962 ELK1 JASPAR yes 70808583
chr19 13231952 13231964 EHF JASPAR yes 70808584
chr19 13231952 13231964 ELF1 JASPAR yes 70808585
chr19 13231952 13231964 ELF4 JASPAR yes 70808586
chr19 13231952 13231965 ELF3 JASPAR yes 70808587
chr19 13231953 13231964 ELF5 JASPAR yes 70808588
chr19 13231954 13231963 ELK4 JASPAR yes 70808589
chr19 13231954 13231964 ELK1 JASPAR yes 70808590
chr19 13231954 13231964 ELK3 JASPAR yes 70808591
chr19 13231954 13231964 ERF JASPAR yes 70808592
chr19 13231954 13231964 ERG JASPAR yes 70808593
chr19 13231954 13231964 ETS1 JASPAR yes 70808594
chr19 13231954 13231964 ETV1 JASPAR yes 70808595
chr19 13231954 13231964 ETV3 JASPAR yes 70808596
chr19 13231954 13231964 ETV4 JASPAR yes 70808597
chr19 13231954 13231964 ETV5 JASPAR yes 70808598
chr19 13231954 13231964 ETV6 JASPAR yes 70808599
chr19 13231954 13231964 FEV JASPAR yes 70808600
chr19 13231954 13231964 FLI1 JASPAR yes 70808601
chr19 13231954 13231964 GABPA JASPAR yes 70808602
chr19 13231954 13231965 ELK4 JASPAR yes 70808603
chr19 13231954 13231965 FLI1 JASPAR yes 70808604
chr19 13231955 13231963 FEV JASPAR yes 70808605
chr19 13231956 13231962 ETS1 JASPAR yes 70808606
chr19 13231956 13231962 SPI1 JASPAR yes 70808607
chr19 13232002 13232022 RREB1 JASPAR yes 70808608
chr19 13232004 13232024 RREB1 JASPAR yes 70808609
chr19 13232005 13232010 SP1 TRANSFAC yes 70808610
chr19 13232018 13232032 PLAG1 JASPAR yes 70808611
chr19 13232020 13232037 RARA JASPAR yes 70808612
chr19 13232026 13232032 MAZ TRANSFAC yes 70808613
chr19 13232032 13232036 ESR1 TRANSFAC yes 70808614
chr19 13232046 13232057 EBF1 JASPAR yes 70808615
SNP sites on vista28691[chr19:13231642-13232105]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 13231868 rs540587616 A C,T no 5448866
chr19 13231875 rs183068756 A T
ELF3
5448867
chr19 13231879 rs4926197 T C
ELF3 FOXA1
5448868
chr19 13231897 rs538725998 GGT G no 5448869
chr19 13231918 rs4926198 T C
BATF3 MEOX2 YY1
5448870
chr19 13231947 rs115227194 G A
RREB1
5448871
chr19 13231995 rs2159214 G A no 5448872
chr19 13232090 rs144413715 A C no 5448873
chr19 13232091 rs374458377 GTCT G no 5448874
chr19 13232091 rs554480045 GTCT G no 5448875
Genes possibly regulated by vista28691[chr19:13231642-13232105]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 13209847 13213975 - LYL1 ENSG00000104903.4 13213975 0.92 0.93 17112 82333
chr19 13215716 13228381 - TRMT1 ENSG00000104907.8 13228381 0.6 1.0 17113 96739
chr19 13228917 13251955 + NACC1 ENSG00000160877.5 13228917 0.67 1.0 17114 97275
chr19 13254872 13261197 - STX10 ENSG00000104915.10 13261197 0.58 1.0 17115 70908
chr19 13261229 13265722 + IER2 ENSG00000160888.6 13261229 0.7 1.0 17116 70876
Expression level of Genes
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miRNAs possibly regulated by vista28691[chr19:13231642-13232105]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results