EnhancerDB
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  3. vista28696[chr19:13262107-13262928]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28696[chr19:13262107-13262928]
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Tissue distribution of vista28696
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Transcription factor that possibly regulate vista28696[chr19:13262107-13262928]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 13260320 13268266 POLR2A UCSC Txn Factor no Conserved 108388799
chr19 13260320 13268266 POLR2A UCSC Txn Factor no Conserved 108388800
chr19 13260320 13268266 POLR2A UCSC Txn Factor no Conserved 108388801
chr19 13262259 13263207 TAF1 UCSC Txn Factor no Conserved 108388854
chr19 13262286 13263254 MAX UCSC Txn Factor no Conserved 108388863
chr19 13262313 13262693 REST UCSC Txn Factor no Conserved 108388880
chr19 13262401 13262604 TEAD4 UCSC Txn Factor no Conserved 108388928
chr19 13262542 13262840 SRF UCSC Txn Factor no Conserved 108388957
chr19 13262549 13263275 ELK4 UCSC Txn Factor no Conserved 108388960
chr19 13262561 13262868 ELK1 UCSC Txn Factor no Conserved 108388962
chr19 13262598 13262918 E2F4 UCSC Txn Factor no Conserved 108388976
chr19 13262698 13263066 E2F1 UCSC Txn Factor no Conserved 108389003
chr19 13262761 13263361 MYC UCSC Txn Factor no Conserved 108389012
chr19 13262132 13262145 SMAD2 JASPAR yes 70808804
chr19 13262153 13262158 TFAP2A TRANSFAC yes 70808805
chr19 13262153 13262159 MZF1 JASPAR yes 70808806
chr19 13262153 13262174 ZNF263 JASPAR yes 70808807
chr19 13262166 13262171 ETS2 TRANSFAC yes 70808808
chr19 13262174 13262178 YY1 TRANSFAC yes 70808809
chr19 13262176 13262190 E2F7 JASPAR yes 70808810
chr19 13262177 13262191 E2F7 JASPAR yes 70808811
chr19 13262178 13262188 MZF1 JASPAR yes 70808812
chr19 13262178 13262190 E2F8 JASPAR yes 70808813
chr19 13262189 13262192 MYB TRANSFAC yes 70808814
chr19 13262189 13262204 STAT2 JASPAR yes 70808815
chr19 13262212 13262222 SP1 JASPAR yes 70808816
chr19 13262213 13262234 ZNF263 JASPAR yes 70808817
chr19 13262214 13262219 ETS2 TRANSFAC yes 70808818
chr19 13262218 13262224 SP1 TRANSFAC yes 70808819
chr19 13262219 13262224 SP1 TRANSFAC yes 70808820
chr19 13262220 13262225 SP1 TRANSFAC yes 70808821
chr19 13262228 13262234 MAZ TRANSFAC yes 70808822
chr19 13262260 13262275 NR2C2 JASPAR yes 70808823
chr19 13262261 13262275 RXRB JASPAR yes 70808824
chr19 13262261 13262275 RXRG JASPAR yes 70808825
chr19 13262261 13262276 HNF4A JASPAR yes 70808826
chr19 13262262 13262272 SP1 JASPAR yes 70808827
chr19 13262263 13262267 LFA1 TRANSFAC yes 70808828
chr19 13262263 13262275 INSM1 JASPAR yes 70808829
chr19 13262266 13262279 NR2F1 JASPAR yes 70808830
chr19 13262270 13262274 ESR1 TRANSFAC yes 70808831
chr19 13262279 13262282 MYB TRANSFAC yes 70808832
chr19 13262283 13262293 SP1 JASPAR yes 70808833
chr19 13262285 13262291 MAZ TRANSFAC yes 70808834
chr19 13262290 13262295 SP1 TRANSFAC yes 70808835
chr19 13262291 13262307 SRF JASPAR yes 70808836
chr19 13262291 13262309 SRF JASPAR yes 70808837
chr19 13262297 13262309 INSM1 JASPAR yes 70808838
chr19 13262298 13262308 MZF1 JASPAR yes 70808839
chr19 13262309 13262317 DLX6 JASPAR yes 70808840
chr19 13262309 13262317 MSX2 JASPAR yes 70808841
chr19 13262315 13262320 ETS2 TRANSFAC yes 70808842
chr19 13262316 13262337 ZNF263 JASPAR yes 70808843
chr19 13262319 13262340 ZNF263 JASPAR yes 70808844
chr19 13262338 13262352 PLAG1 JASPAR yes 70808845
chr19 13262339 13262344 SP1 TRANSFAC yes 70808846
chr19 13262343 13262358 ZIC3 JASPAR yes 70808847
chr19 13262343 13262358 ZIC4 JASPAR yes 70808848
chr19 13262344 13262358 ZIC1 JASPAR yes 70808849
chr19 13262396 13262402 YY1 JASPAR yes 70808850
chr19 13262417 13262434 ESR1 JASPAR yes 70808851
chr19 13262425 13262439 ZIC1 JASPAR yes 70808852
chr19 13262425 13262440 ZIC3 JASPAR yes 70808853
chr19 13262431 13262446 ZIC3 JASPAR yes 70808854
chr19 13262432 13262446 ZIC1 JASPAR yes 70808855
chr19 13262440 13262450 REL JASPAR yes 70808856
chr19 13262442 13262459 BCL6B JASPAR yes 70808857
chr19 13262450 13262458 CREB1 JASPAR yes 70808858
chr19 13262454 13262473 PAX5 JASPAR yes 70808859
chr19 13262460 13262468 EHF JASPAR yes 70808860
chr19 13262461 13262476 RFX5 JASPAR yes 70808861
chr19 13262463 13262482 CTCF JASPAR yes 70808862
chr19 13262468 13262481 TFAP2A JASPAR yes 70808863
chr19 13262468 13262481 TFAP2C JASPAR yes 70808864
chr19 13262469 13262480 EBF1 JASPAR yes 70808865
chr19 13262473 13262484 E2F6 JASPAR yes 70808866
chr19 13262476 13262489 ELF1 JASPAR yes 70808867
chr19 13262477 13262482 ETS2 TRANSFAC yes 70808868
chr19 13262477 13262498 IRF1 JASPAR yes 70808869
chr19 13262479 13262490 FLI1 JASPAR yes 70808870
chr19 13262479 13262494 IRF9 JASPAR yes 70808871
chr19 13262480 13262485 ETS2 TRANSFAC yes 70808872
chr19 13262480 13262488 FEV JASPAR yes 70808873
chr19 13262480 13262494 IRF7 JASPAR yes 70808874
chr19 13262481 13262488 SPI1 JASPAR yes 70808875
chr19 13262481 13262495 STAT1 JASPAR yes 70808876
chr19 13262481 13262496 PRDM1 JASPAR yes 70808877
chr19 13262481 13262496 STAT2 JASPAR yes 70808878
chr19 13262482 13262494 IRF1 JASPAR yes 70808879
chr19 13262511 13262523 TEAD1 JASPAR yes 70808880
chr19 13262513 13262523 TEAD1 JASPAR yes 70808881
chr19 13262513 13262523 TEAD4 JASPAR yes 70808882
chr19 13262514 13262522 TEAD3 JASPAR yes 70808883
chr19 13262522 13262535 ELF1 JASPAR yes 70808884
chr19 13262530 13262545 TFAP2C JASPAR yes 70808885
chr19 13262531 13262542 TFAP2A JASPAR yes 70808886
chr19 13262531 13262542 TFAP2B JASPAR yes 70808887
chr19 13262531 13262542 TFAP2C JASPAR yes 70808888
chr19 13262532 13262541 TFAP2A JASPAR yes 70808889
chr19 13262567 13262577 SP1 JASPAR yes 70808890
chr19 13262569 13262579 MZF1 JASPAR yes 70808891
chr19 13262572 13262577 TFAP2A TRANSFAC yes 70808892
chr19 13262572 13262578 MZF1 JASPAR yes 70808893
chr19 13262572 13262582 SP1 JASPAR yes 70808894
chr19 13262574 13262580 MAZ TRANSFAC yes 70808895
chr19 13262599 13262608 SP1 TRANSFAC yes 70808896
chr19 13262600 13262606 SP1 TRANSFAC yes 70808897
chr19 13262600 13262610 SP1 JASPAR yes 70808898
chr19 13262601 13262608 SP1 TRANSFAC yes 70808899
chr19 13262602 13262607 SP1 TRANSFAC yes 70808900
chr19 13262602 13262608 SP1 TRANSFAC yes 70808901
chr19 13262605 13262611 SP1 TRANSFAC yes 70808902
chr19 13262605 13262619 PLAG1 JASPAR yes 70808903
chr19 13262614 13262624 ZNF740 JASPAR yes 70808904
chr19 13262615 13262625 SP1 JASPAR yes 70808905
chr19 13262615 13262625 ZNF740 JASPAR yes 70808906
chr19 13262616 13262626 SP1 JASPAR yes 70808907
chr19 13262616 13262626 ZNF740 JASPAR yes 70808908
chr19 13262620 13262632 ELF1 JASPAR yes 70808909
chr19 13262620 13262634 PLAG1 JASPAR yes 70808910
chr19 13262622 13262631 ELK4 JASPAR yes 70808911
chr19 13262622 13262632 GABPA JASPAR yes 70808912
chr19 13262622 13262633 ELK4 JASPAR yes 70808913
chr19 13262624 13262630 ETS1 JASPAR yes 70808914
chr19 13262624 13262630 SPI1 JASPAR yes 70808915
chr19 13262630 13262636 SP1 TRANSFAC yes 70808916
chr19 13262630 13262640 SP1 JASPAR yes 70808917
chr19 13262631 13262643 TFAP2A TRANSFAC yes 70808918
chr19 13262662 13262680 SRF JASPAR yes 70808919
chr19 13262663 13262667 NFE TRANSFAC yes 70808920
chr19 13262664 13262680 SRF JASPAR yes 70808921
chr19 13262664 13262682 SRF JASPAR yes 70808922
chr19 13262665 13262677 SRF JASPAR yes 70808923
chr19 13262667 13262679 SRF JASPAR yes 70808924
chr19 13262672 13262681 THAP1 JASPAR yes 70808925
chr19 13262675 13262679 LFA1 TRANSFAC yes 70808926
chr19 13262677 13262690 ELF1 JASPAR yes 70808927
chr19 13262678 13262688 ELK1 JASPAR yes 70808928
chr19 13262678 13262690 EHF JASPAR yes 70808929
chr19 13262678 13262690 ELF1 JASPAR yes 70808930
chr19 13262678 13262690 ELF4 JASPAR yes 70808931
chr19 13262678 13262691 ELF3 JASPAR yes 70808932
chr19 13262679 13262690 ELF5 JASPAR yes 70808933
chr19 13262679 13262690 ETV2 JASPAR yes 70808934
chr19 13262679 13262690 SPDEF JASPAR yes 70808935
chr19 13262680 13262689 ELK4 JASPAR yes 70808936
chr19 13262680 13262690 ELK1 JASPAR yes 70808937
chr19 13262680 13262690 ELK3 JASPAR yes 70808938
chr19 13262680 13262690 ERF JASPAR yes 70808939
chr19 13262680 13262690 ERG JASPAR yes 70808940
chr19 13262680 13262690 ETS1 JASPAR yes 70808941
chr19 13262680 13262690 ETV1 JASPAR yes 70808942
chr19 13262680 13262690 ETV3 JASPAR yes 70808943
chr19 13262680 13262690 ETV4 JASPAR yes 70808944
chr19 13262680 13262690 ETV5 JASPAR yes 70808945
chr19 13262680 13262690 ETV6 JASPAR yes 70808946
chr19 13262680 13262690 FEV JASPAR yes 70808947
chr19 13262680 13262690 FLI1 JASPAR yes 70808948
chr19 13262680 13262690 GABPA JASPAR yes 70808949
chr19 13262680 13262691 ELK4 JASPAR yes 70808950
chr19 13262680 13262691 FLI1 JASPAR yes 70808951
chr19 13262682 13262688 ETS1 JASPAR yes 70808952
chr19 13262682 13262688 SPI1 JASPAR yes 70808953
chr19 13262688 13262705 PAX9 JASPAR yes 70808954
chr19 13262706 13262718 CREB1 JASPAR yes 70808955
chr19 13262707 13262712 ATF1 TRANSFAC yes 70808956
chr19 13262736 13262748 INSM1 JASPAR yes 70808957
chr19 13262749 13262763 E2F7 JASPAR yes 70808958
chr19 13262751 13262762 E2F1 JASPAR yes 70808959
chr19 13262752 13262763 E2F4 JASPAR yes 70808960
chr19 13262752 13262763 E2F6 JASPAR yes 70808961
chr19 13262753 13262758 SP1 TRANSFAC yes 70808962
chr19 13262756 13262761 ETS2 TRANSFAC yes 70808963
chr19 13262776 13262785 THAP1 JASPAR yes 70808964
chr19 13262779 13262784 SP1 TRANSFAC yes 70808965
chr19 13262779 13262793 PLAG1 JASPAR yes 70808966
chr19 13262782 13262788 ETS1 JASPAR yes 70808967
chr19 13262787 13262802 NR2C2 JASPAR yes 70808968
chr19 13262788 13262795 SP1 TRANSFAC yes 70808969
chr19 13262788 13262798 SP1 JASPAR yes 70808970
chr19 13262789 13262797 SP1 TRANSFAC yes 70808971
chr19 13262790 13262795 SP1 TRANSFAC yes 70808972
chr19 13262791 13262796 SP1 TRANSFAC yes 70808973
chr19 13262791 13262797 SP1 TRANSFAC yes 70808974
chr19 13262791 13262803 ZBTB7B JASPAR yes 70808975
chr19 13262791 13262803 ZBTB7C JASPAR yes 70808976
chr19 13262792 13262804 ZBTB7A JASPAR yes 70808977
chr19 13262859 13262874 MEF2A JASPAR yes 70808978
chr19 13262860 13262875 MEF2C JASPAR yes 70808979
chr19 13262861 13262873 MEF2A JASPAR yes 70808980
chr19 13262861 13262873 MEF2B JASPAR yes 70808981
chr19 13262861 13262873 MEF2D JASPAR yes 70808982
chr19 13262862 13262872 MEF2A JASPAR yes 70808983
chr19 13262863 13262867 YY1 TRANSFAC yes 70808984
chr19 13262867 13262880 ELF1 JASPAR yes 70808985
chr19 13262870 13262876 PEA3 TRANSFAC yes 70808986
chr19 13262870 13262880 ETV6 JASPAR yes 70808987
chr19 13262870 13262881 ELK4 JASPAR yes 70808988
chr19 13262870 13262881 FLI1 JASPAR yes 70808989
chr19 13262871 13262879 EHF JASPAR yes 70808990
chr19 13262872 13262879 SPI1 JASPAR yes 70808991
chr19 13262887 13262891 YY1 TRANSFAC yes 70808992
chr19 13262906 13262922 GLIS1 JASPAR yes 70808993
chr19 13262907 13262921 GLIS3 JASPAR yes 70808994
chr19 13262920 13262926 SP1 TRANSFAC yes 70808995
chr19 13262921 13262926 SP1 TRANSFAC yes 70808996
SNP sites on vista28696[chr19:13262107-13262928]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 13262174 rs76005517 G A
POLR2A YY1 ZNF263
5449015
chr19 13262315 rs185624425 T C
DLX6 ETS2 MAX MSX2 POLR2A REST TAF1
5449016
chr19 13262322 rs1469692 A G
MAX POLR2A REST TAF1 ZNF263
5449017
chr19 13262593 rs552128657 G A
ELK1 ELK4 MAX POLR2A REST SRF TAF1 TEAD4
5449018
chr19 13262621 rs59789192 C CA
E2F4 ELF1 ELK1 ELK4 MAX PLAG1 POLR2A REST SP1 SRF TAF1 ZNF740
5449019
chr19 13262694 rs190530123 C T
E2F4 ELK1 ELK4 MAX PAX9 POLR2A SRF TAF1
5449020
chr19 13262733 rs373222494 T C
E2F1 E2F4 ELK1 ELK4 MAX POLR2A SRF TAF1
5449021
Genes possibly regulated by vista28696[chr19:13262107-13262928]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 13209847 13213975 - LYL1 ENSG00000104903.4 13213975 0.92 0.93 17112 51868
chr19 13215716 13228381 - TRMT1 ENSG00000104907.8 13228381 0.6 1.0 17113 66274
chr19 13228917 13251955 + NACC1 ENSG00000160877.5 13228917 0.67 1.0 17114 66810
chr19 13254872 13261197 - STX10 ENSG00000104915.10 13261197 0.58 1.0 17115 99090
chr19 13261229 13265722 + IER2 ENSG00000160888.6 13261229 0.7 1.0 17116 99122
Expression level of Genes
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miRNAs possibly regulated by vista28696[chr19:13262107-13262928]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results