EnhancerDB
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  3. vista28698[chr19:13267779-13268208]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28698[chr19:13267779-13268208]
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Tissue distribution of vista28698
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Transcription factor that possibly regulate vista28698[chr19:13267779-13268208]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 13260320 13268266 POLR2A UCSC Txn Factor no Conserved 108388799
chr19 13260320 13268266 POLR2A UCSC Txn Factor no Conserved 108388800
chr19 13260320 13268266 POLR2A UCSC Txn Factor no Conserved 108388801
chr19 13267778 13267782 NFE TRANSFAC yes 70809147
chr19 13267778 13267782 NFE TRANSFAC yes 112513089
chr19 13267780 13267795 MEF2C JASPAR yes 70809148
chr19 13267780 13267795 MEF2C JASPAR yes 112513090
chr19 13267785 13267806 ZNF263 JASPAR yes 70809149
chr19 13267785 13267806 ZNF263 JASPAR yes 112513091
chr19 13267786 13267807 IRF1 JASPAR yes 70809150
chr19 13267786 13267807 IRF1 JASPAR yes 112513092
chr19 13267787 13267801 SPI1 JASPAR yes 70809151
chr19 13267787 13267801 SPI1 JASPAR yes 112513093
chr19 13267788 13267809 ZNF263 JASPAR yes 70809152
chr19 13267788 13267809 ZNF263 JASPAR yes 112513094
chr19 13267789 13267810 IRF1 JASPAR yes 70809153
chr19 13267789 13267810 ZNF263 JASPAR yes 70809154
chr19 13267789 13267810 IRF1 JASPAR yes 112513095
chr19 13267789 13267810 ZNF263 JASPAR yes 112513096
chr19 13267791 13267812 ZNF263 JASPAR yes 70809155
chr19 13267791 13267812 ZNF263 JASPAR yes 112513097
chr19 13267792 13267813 ZNF263 JASPAR yes 70809156
chr19 13267792 13267813 ZNF263 JASPAR yes 112513098
chr19 13267794 13267815 ZNF263 JASPAR yes 70809157
chr19 13267794 13267815 ZNF263 JASPAR yes 112513099
chr19 13267795 13267816 ZNF263 JASPAR yes 70809158
chr19 13267795 13267816 ZNF263 JASPAR yes 112513100
chr19 13267797 13267818 ZNF263 JASPAR yes 70809159
chr19 13267797 13267818 ZNF263 JASPAR yes 112513101
chr19 13267814 13267824 OLIG2 JASPAR yes 70809160
chr19 13267814 13267824 OLIG3 JASPAR yes 70809161
chr19 13267814 13267824 OLIG2 JASPAR yes 112513102
chr19 13267814 13267824 OLIG3 JASPAR yes 112513103
chr19 13267823 13267834 E2F6 JASPAR yes 70809162
chr19 13267823 13267834 E2F6 JASPAR yes 112513104
chr19 13267825 13267833 SP1 TRANSFAC yes 70809163
chr19 13267825 13267833 SP1 TRANSFAC yes 112513105
chr19 13267827 13267833 MAZ TRANSFAC yes 70809164
chr19 13267827 13267833 MAZ TRANSFAC yes 112513106
chr19 13267827 13267838 E2F6 JASPAR yes 70809165
chr19 13267827 13267838 E2F6 JASPAR yes 112513107
chr19 13267843 13267861 IRF2 JASPAR yes 70809166
chr19 13267843 13267861 IRF2 JASPAR yes 112513108
chr19 13267844 13267865 IRF1 JASPAR yes 70809167
chr19 13267844 13267865 IRF1 JASPAR yes 112513109
chr19 13267846 13267861 PRDM1 JASPAR yes 70809168
chr19 13267846 13267861 STAT2 JASPAR yes 70809169
chr19 13267846 13267861 PRDM1 JASPAR yes 112513110
chr19 13267846 13267861 STAT2 JASPAR yes 112513111
chr19 13267847 13267861 SPIC JASPAR yes 70809170
chr19 13267847 13267861 STAT1 JASPAR yes 70809171
chr19 13267847 13267861 SPIC JASPAR yes 112513112
chr19 13267847 13267861 STAT1 JASPAR yes 112513113
chr19 13267848 13267860 IRF1 JASPAR yes 70809172
chr19 13267848 13267860 IRF1 JASPAR yes 112513114
chr19 13267848 13267862 IRF7 JASPAR yes 70809173
chr19 13267848 13267862 IRF8 JASPAR yes 70809174
chr19 13267848 13267862 IRF7 JASPAR yes 112513115
chr19 13267848 13267862 IRF8 JASPAR yes 112513116
chr19 13267848 13267863 IRF9 JASPAR yes 70809175
chr19 13267848 13267863 IRF9 JASPAR yes 112513117
chr19 13267872 13267886 JUN JASPAR yes 70809176
chr19 13267872 13267886 JUN JASPAR yes 112513118
chr19 13267875 13267886 FOSL2 JASPAR yes 70809177
chr19 13267875 13267886 JUNB JASPAR yes 70809178
chr19 13267875 13267886 FOSL2 JASPAR yes 112513119
chr19 13267875 13267886 JUNB JASPAR yes 112513120
chr19 13267876 13267887 FOS JASPAR yes 70809179
chr19 13267876 13267887 FOSL1 JASPAR yes 70809180
chr19 13267876 13267887 JUND JASPAR yes 70809181
chr19 13267876 13267887 NFE2 JASPAR yes 70809182
chr19 13267876 13267887 FOS JASPAR yes 112513121
chr19 13267876 13267887 FOSL1 JASPAR yes 112513122
chr19 13267876 13267887 JUND JASPAR yes 112513123
chr19 13267876 13267887 NFE2 JASPAR yes 112513124
chr19 13267877 13267886 JDP2 JASPAR yes 70809183
chr19 13267877 13267886 JDP2 JASPAR yes 112513125
chr19 13267877 13267888 FOSL2 JASPAR yes 70809184
chr19 13267877 13267888 JUNB JASPAR yes 70809185
chr19 13267877 13267888 FOSL2 JASPAR yes 112513126
chr19 13267877 13267888 JUNB JASPAR yes 112513127
chr19 13267877 13267891 JUN JASPAR yes 70809186
chr19 13267877 13267891 JUN JASPAR yes 112513128
chr19 13267883 13267896 NR2F1 JASPAR yes 70809187
chr19 13267883 13267896 NR2F1 JASPAR yes 112513129
chr19 13267889 13267909 TP53 JASPAR yes 70809188
chr19 13267889 13267909 TP53 JASPAR yes 112513130
chr19 13267906 13267912 MZF1 JASPAR yes 70809189
chr19 13267906 13267912 MZF1 JASPAR yes 112513131
chr19 13267921 13267926 TFAP2A TRANSFAC yes 70809190
chr19 13267921 13267926 TFAP2A TRANSFAC yes 112513132
chr19 13267921 13267927 MZF1 JASPAR yes 70809191
chr19 13267921 13267927 MZF1 JASPAR yes 112513133
chr19 13268056 13268059 MYB TRANSFAC yes 70809192
chr19 13268056 13268059 MYB TRANSFAC yes 112513134
chr19 13268056 13268068 INSM1 JASPAR yes 70809193
chr19 13268056 13268068 INSM1 JASPAR yes 112513135
chr19 13268079 13268097 RARA JASPAR yes 70809194
chr19 13268079 13268097 RARA JASPAR yes 112513136
chr19 13268080 13268088 TBX15 JASPAR yes 70809195
chr19 13268080 13268088 TBX15 JASPAR yes 112513137
chr19 13268080 13268091 E2F6 JASPAR yes 70809196
chr19 13268080 13268091 E2F6 JASPAR yes 112513138
chr19 13268081 13268086 SP1 TRANSFAC yes 70809197
chr19 13268081 13268086 SP1 TRANSFAC yes 112513139
chr19 13268208 13268229 REST JASPAR yes 70809198
chr19 13268208 13268229 REST JASPAR yes 112513140
SNP sites on vista28698[chr19:13267779-13268208]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 13267790 rs139691025 A AAAG,AAAGAAG,AAAGAAGAAG,AAAGAAGAAGAAG
IRF1 MEF2C POLR2A SPI1 ZNF263
5449072
chr19 13267866 rs541842011 A G
POLR2A
5449073
chr19 13267950 rs143626759 G T
POLR2A
5449074
chr19 13268094 rs114279272 A G
POLR2A RARA
5449075
Genes possibly regulated by vista28698[chr19:13267779-13268208]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 13209847 13213975 - LYL1 ENSG00000104903.4 13213975 0.92 0.93 17112 46196
chr19 13215716 13228381 - TRMT1 ENSG00000104907.8 13228381 0.6 1.0 17113 60602
chr19 13228917 13251955 + NACC1 ENSG00000160877.5 13228917 0.67 1.0 17114 61138
chr19 13254872 13261197 - STX10 ENSG00000104915.10 13261197 0.58 1.0 17115 93418
chr19 13261229 13265722 + IER2 ENSG00000160888.6 13261229 0.7 1.0 17116 93450
Expression level of Genes
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miRNAs possibly regulated by vista28698[chr19:13267779-13268208]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results