EnhancerDB
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  3. vista28699[chr19:13273540-13274187]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28699[chr19:13273540-13274187]
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Tissue distribution of vista28699
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Transcription factor that possibly regulate vista28699[chr19:13273540-13274187]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 13273159 13276000 POLR2A UCSC Txn Factor no Conserved 108389190
chr19 13273159 13276000 POLR2A UCSC Txn Factor no Conserved 108389191
chr19 13273159 13276000 POLR2A UCSC Txn Factor no Conserved 108389192
chr19 13273436 13273864 PHF8 UCSC Txn Factor no Conserved 108389205
chr19 13273489 13274169 TFAP2C UCSC Txn Factor no Conserved 108389214
chr19 13273496 13274177 E2F1 UCSC Txn Factor no Conserved 108389215
chr19 13273522 13274380 MAX UCSC Txn Factor no Conserved 108389224
chr19 13273536 13274192 TFAP2A UCSC Txn Factor no Conserved 108389227
chr19 13273646 13274123 STAT1 UCSC Txn Factor no Conserved 108389262
chr19 13273730 13274066 E2F4 UCSC Txn Factor no Conserved 108389283
chr19 13273779 13273998 SRF UCSC Txn Factor no Conserved 108389291
chr19 13273877 13274299 ZBTB7A UCSC Txn Factor no Conserved 108389312
chr19 13273883 13274186 EGR1 UCSC Txn Factor no Conserved 108389314
chr19 13273525 13273546 ZNF263 JASPAR yes 70809199
chr19 13273525 13273546 ZNF263 JASPAR yes 112514045
chr19 13273530 13273551 ZNF263 JASPAR yes 70809200
chr19 13273530 13273551 ZNF263 JASPAR yes 112514046
chr19 13273533 13273548 NR2C2 JASPAR yes 70809201
chr19 13273533 13273548 NR2C2 JASPAR yes 112514048
chr19 13273544 13273563 PAX5 JASPAR yes 70809202
chr19 13273544 13273563 PAX5 JASPAR yes 112514049
chr19 13273566 13273571 ETS2 TRANSFAC yes 70809203
chr19 13273566 13273571 ETS2 TRANSFAC yes 112514050
chr19 13273566 13273574 EHF JASPAR yes 70809204
chr19 13273566 13273574 EHF JASPAR yes 112514051
chr19 13273567 13273585 E2F3 JASPAR yes 70809205
chr19 13273567 13273585 E2F3 JASPAR yes 112514052
chr19 13273596 13273607 STAT3 JASPAR yes 70809206
chr19 13273596 13273607 STAT3 JASPAR yes 112514053
chr19 13273612 13273625 SCRT2 JASPAR yes 70809207
chr19 13273612 13273625 SCRT2 JASPAR yes 112514054
chr19 13273612 13273627 SCRT1 JASPAR yes 70809208
chr19 13273612 13273627 SCRT1 JASPAR yes 112514055
chr19 13273625 13273640 HSF1 JASPAR yes 70809209
chr19 13273625 13273640 HSF1 JASPAR yes 112514056
chr19 13273626 13273639 HSF2 JASPAR yes 70809210
chr19 13273626 13273639 HSF4 JASPAR yes 70809211
chr19 13273626 13273639 HSF2 JASPAR yes 112514057
chr19 13273626 13273639 HSF4 JASPAR yes 112514058
chr19 13273628 13273632 H1TF2 TRANSFAC yes 70809212
chr19 13273628 13273632 NFE TRANSFAC yes 70809213
chr19 13273628 13273632 SRF TRANSFAC yes 70809214
chr19 13273628 13273632 H1TF2 TRANSFAC yes 112514059
chr19 13273628 13273632 NFE TRANSFAC yes 112514060
chr19 13273628 13273632 SRF TRANSFAC yes 112514061
chr19 13273639 13273658 REST JASPAR yes 70809215
chr19 13273639 13273658 REST JASPAR yes 112514062
chr19 13273647 13273659 GRHL1 JASPAR yes 70809216
chr19 13273647 13273659 GRHL1 JASPAR yes 112514063
chr19 13273648 13273658 TFCP2 JASPAR yes 70809217
chr19 13273648 13273658 TFCP2 JASPAR yes 112514064
chr19 13273665 13273686 REST JASPAR yes 70809218
chr19 13273665 13273686 REST JASPAR yes 112514065
chr19 13273687 13273702 TFAP2A JASPAR yes 70809219
chr19 13273687 13273702 TFAP2C JASPAR yes 70809220
chr19 13273687 13273702 TFAP2A JASPAR yes 112514066
chr19 13273687 13273702 TFAP2C JASPAR yes 112514067
chr19 13273689 13273694 SP1 TRANSFAC yes 70809221
chr19 13273689 13273694 SP1 TRANSFAC yes 112514068
chr19 13273690 13273702 TFAP2A JASPAR yes 70809222
chr19 13273690 13273702 TFAP2B JASPAR yes 70809223
chr19 13273690 13273702 TFAP2C JASPAR yes 70809224
chr19 13273690 13273702 TFAP2A JASPAR yes 112514069
chr19 13273690 13273702 TFAP2B JASPAR yes 112514070
chr19 13273690 13273702 TFAP2C JASPAR yes 112514071
chr19 13273691 13273700 TFAP2A JASPAR yes 70809225
chr19 13273691 13273700 TFAP2A JASPAR yes 112514072
chr19 13273697 13273701 LFA1 TRANSFAC yes 70809226
chr19 13273697 13273701 LFA1 TRANSFAC yes 112514073
chr19 13273728 13273733 MYC TRANSFAC yes 70809227
chr19 13273728 13273733 MYC TRANSFAC yes 112514074
chr19 13273746 13273751 SP1 TRANSFAC yes 70809228
chr19 13273746 13273751 SP1 TRANSFAC yes 112514075
chr19 13273748 13273753 TFAP2A TRANSFAC yes 70809229
chr19 13273748 13273753 TFAP2A TRANSFAC yes 112514076
chr19 13273748 13273754 MZF1 JASPAR yes 70809230
chr19 13273748 13273754 MZF1 JASPAR yes 112514077
chr19 13273760 13273769 NFIX JASPAR yes 70809231
chr19 13273760 13273769 NFIX JASPAR yes 112514078
chr19 13273762 13273768 NFIC JASPAR yes 70809232
chr19 13273762 13273768 NFIC JASPAR yes 112514079
chr19 13273766 13273771 ETS2 TRANSFAC yes 70809233
chr19 13273766 13273771 ETS2 TRANSFAC yes 112514080
chr19 13273766 13273774 FEV JASPAR yes 70809234
chr19 13273766 13273774 FEV JASPAR yes 112514081
chr19 13273775 13273786 E2F1 JASPAR yes 70809235
chr19 13273775 13273786 E2F1 JASPAR yes 112514082
chr19 13273776 13273787 E2F4 JASPAR yes 70809236
chr19 13273776 13273787 E2F6 JASPAR yes 70809237
chr19 13273776 13273787 E2F4 JASPAR yes 112514083
chr19 13273776 13273787 E2F6 JASPAR yes 112514084
chr19 13273798 13273803 SP1 TRANSFAC yes 70809238
chr19 13273798 13273803 SP1 TRANSFAC yes 112514085
chr19 13273820 13273826 SP1 TRANSFAC yes 70809239
chr19 13273820 13273826 SP1 TRANSFAC yes 112514086
chr19 13273821 13273826 SP1 TRANSFAC yes 70809240
chr19 13273821 13273826 SP1 TRANSFAC yes 112514087
chr19 13273825 13273837 YY1 JASPAR yes 70809241
chr19 13273825 13273837 YY1 JASPAR yes 112514088
chr19 13273828 13273834 YY1 JASPAR yes 70809242
chr19 13273828 13273834 YY1 JASPAR yes 112514089
chr19 13273836 13273849 SMAD2 JASPAR yes 70809243
chr19 13273836 13273849 SMAD2 JASPAR yes 112514090
chr19 13273840 13273844 NFE TRANSFAC yes 70809244
chr19 13273840 13273844 NFE TRANSFAC yes 112514091
chr19 13273845 13273850 SP1 TRANSFAC yes 70809245
chr19 13273845 13273850 SP1 TRANSFAC yes 112514092
chr19 13273846 13273858 TFAP2A JASPAR yes 70809246
chr19 13273846 13273858 TFAP2B JASPAR yes 70809247
chr19 13273846 13273858 TFAP2C JASPAR yes 70809248
chr19 13273846 13273858 TFAP2A JASPAR yes 112514093
chr19 13273846 13273858 TFAP2B JASPAR yes 112514094
chr19 13273846 13273858 TFAP2C JASPAR yes 112514095
chr19 13273852 13273858 SP1 TRANSFAC yes 70809249
chr19 13273852 13273858 SP1 TRANSFAC yes 112514096
chr19 13273853 13273858 SP1 TRANSFAC yes 70809250
chr19 13273853 13273858 SP1 TRANSFAC yes 112514097
chr19 13273859 13273871 POU2F1 JASPAR yes 70809251
chr19 13273859 13273871 POU2F1 JASPAR yes 112514098
chr19 13273860 13273872 POU3F2 JASPAR yes 70809252
chr19 13273860 13273872 POU3F2 JASPAR yes 112514099
chr19 13273860 13273873 POU2F2 JASPAR yes 70809253
chr19 13273860 13273873 POU2F2 JASPAR yes 112514100
chr19 13273861 13273870 POU3F4 JASPAR yes 70809254
chr19 13273861 13273870 POU5F1B JASPAR yes 70809255
chr19 13273861 13273870 POU3F4 JASPAR yes 112514101
chr19 13273861 13273870 POU5F1B JASPAR yes 112514102
chr19 13273862 13273869 POU2F1 TRANSFAC yes 70809256
chr19 13273862 13273869 POU2F2 TRANSFAC yes 70809257
chr19 13273862 13273869 POU2F1 TRANSFAC yes 112514103
chr19 13273862 13273869 POU2F2 TRANSFAC yes 112514104
chr19 13273879 13273883 YY1 TRANSFAC yes 70809258
chr19 13273879 13273883 YY1 TRANSFAC yes 112514105
chr19 13273883 13273894 NFKB1 JASPAR yes 70809259
chr19 13273883 13273894 NFKB1 JASPAR yes 112514106
chr19 13273924 13273939 STAT1 JASPAR yes 70809260
chr19 13273924 13273939 STAT1 JASPAR yes 112514107
chr19 13273926 13273937 STAT1 JASPAR yes 70809261
chr19 13273926 13273937 STAT3 JASPAR yes 70809262
chr19 13273926 13273937 STAT1 JASPAR yes 112514108
chr19 13273926 13273937 STAT3 JASPAR yes 112514109
chr19 13273933 13273949 GLIS1 JASPAR yes 70809263
chr19 13273933 13273949 GLIS1 JASPAR yes 112514110
chr19 13273963 13273968 SP1 TRANSFAC yes 70809264
chr19 13273963 13273968 SP1 TRANSFAC yes 112514111
chr19 13273971 13273977 ETS1 JASPAR yes 70809265
chr19 13273971 13273977 ETS1 JASPAR yes 112514112
chr19 13273971 13273981 ELK1 JASPAR yes 70809266
chr19 13273971 13273981 ELK1 JASPAR yes 112514113
chr19 13273980 13273985 SP1 TRANSFAC yes 70809267
chr19 13273980 13273985 SP1 TRANSFAC yes 112514114
chr19 13273985 13273994 THAP1 JASPAR yes 70809268
chr19 13273985 13273994 THAP1 JASPAR yes 112514115
chr19 13273987 13273994 SP1 TRANSFAC yes 70809269
chr19 13273987 13273994 SP1 TRANSFAC yes 112514116
chr19 13273987 13274002 TFAP2C JASPAR yes 70809270
chr19 13273987 13274002 TFAP2C JASPAR yes 112514117
chr19 13273988 13273995 SP1 TRANSFAC yes 70809271
chr19 13273988 13273995 SP1 TRANSFAC yes 112514118
chr19 13273989 13273994 SP1 TRANSFAC yes 70809272
chr19 13273989 13273994 SP1 TRANSFAC yes 112514119
chr19 13273989 13273995 SP1 TRANSFAC yes 70809273
chr19 13273989 13273995 SP1 TRANSFAC yes 112514120
chr19 13273990 13274001 EBF1 JASPAR yes 70809274
chr19 13273990 13274001 TFAP2A JASPAR yes 70809275
chr19 13273990 13274001 TFAP2B JASPAR yes 70809276
chr19 13273990 13274001 TFAP2C JASPAR yes 70809277
chr19 13273990 13274001 EBF1 JASPAR yes 112514121
chr19 13273990 13274001 TFAP2A JASPAR yes 112514122
chr19 13273990 13274001 TFAP2B JASPAR yes 112514123
chr19 13273990 13274001 TFAP2C JASPAR yes 112514124
chr19 13273991 13274000 TFAP2A JASPAR yes 70809278
chr19 13273991 13274000 TFAP2A JASPAR yes 112514125
chr19 13273998 13274008 SP1 JASPAR yes 70809279
chr19 13273998 13274008 SP1 JASPAR yes 112514126
chr19 13274000 13274005 SP1 TRANSFAC yes 70809280
chr19 13274000 13274005 SP1 TRANSFAC yes 112514127
chr19 13274001 13274006 SP1 TRANSFAC yes 70809281
chr19 13274001 13274006 SP1 TRANSFAC yes 112514128
chr19 13274001 13274007 SP1 TRANSFAC yes 70809282
chr19 13274001 13274007 SP1 TRANSFAC yes 112514129
chr19 13274002 13274010 SP1 TRANSFAC yes 70809283
chr19 13274002 13274010 WT1 TRANSFAC yes 70809284
chr19 13274002 13274010 SP1 TRANSFAC yes 112514130
chr19 13274002 13274010 WT1 TRANSFAC yes 112514131
chr19 13274004 13274011 SP1 TRANSFAC yes 70809285
chr19 13274004 13274011 SP1 TRANSFAC yes 112514132
chr19 13274004 13274014 SP1 JASPAR yes 70809286
chr19 13274004 13274014 SP1 JASPAR yes 112514133
chr19 13274006 13274011 SP1 TRANSFAC yes 70809287
chr19 13274006 13274011 SP1 TRANSFAC yes 112514134
chr19 13274020 13274035 ZIC3 JASPAR yes 70809288
chr19 13274020 13274035 ZIC4 JASPAR yes 70809289
chr19 13274020 13274035 ZIC3 JASPAR yes 112514135
chr19 13274020 13274035 ZIC4 JASPAR yes 112514136
chr19 13274021 13274035 ZIC1 JASPAR yes 70809290
chr19 13274021 13274035 ZIC1 JASPAR yes 112514137
chr19 13274023 13274034 E2F4 JASPAR yes 70809291
chr19 13274023 13274034 E2F4 JASPAR yes 112514138
chr19 13274027 13274032 ETS2 TRANSFAC yes 70809292
chr19 13274027 13274032 ETS2 TRANSFAC yes 112514139
chr19 13274031 13274036 SP1 TRANSFAC yes 70809293
chr19 13274031 13274036 SP1 TRANSFAC yes 112514140
chr19 13274035 13274045 SP1 JASPAR yes 70809294
chr19 13274035 13274045 SP1 JASPAR yes 112514141
chr19 13274037 13274042 SP1 TRANSFAC yes 70809295
chr19 13274037 13274042 SP1 TRANSFAC yes 112514142
chr19 13274038 13274043 SP1 TRANSFAC yes 70809296
chr19 13274038 13274043 SP1 TRANSFAC yes 112514143
chr19 13274038 13274044 SP1 TRANSFAC yes 70809297
chr19 13274038 13274044 SP1 TRANSFAC yes 112514144
chr19 13274038 13274050 ZBTB7B JASPAR yes 70809298
chr19 13274038 13274050 ZBTB7C JASPAR yes 70809299
chr19 13274038 13274050 ZBTB7B JASPAR yes 112514145
chr19 13274038 13274050 ZBTB7C JASPAR yes 112514146
chr19 13274039 13274051 ZBTB7A JASPAR yes 70809300
chr19 13274039 13274051 ZBTB7A JASPAR yes 112514147
chr19 13274055 13274059 H4TF2 TRANSFAC yes 70809301
chr19 13274055 13274059 H4TF2 TRANSFAC yes 112514148
chr19 13274058 13274067 TFAP2A JASPAR yes 70809302
chr19 13274058 13274067 TFAP2A JASPAR yes 112514149
chr19 13274079 13274084 ETS2 TRANSFAC yes 70809303
chr19 13274079 13274084 ETS2 TRANSFAC yes 112514150
chr19 13274099 13274104 SP1 TRANSFAC yes 70809304
chr19 13274099 13274104 SP1 TRANSFAC yes 112514151
chr19 13274100 13274113 TFAP2A JASPAR yes 70809305
chr19 13274100 13274113 TFAP2B JASPAR yes 70809306
chr19 13274100 13274113 TFAP2C JASPAR yes 70809307
chr19 13274100 13274113 TFAP2A JASPAR yes 112514152
chr19 13274100 13274113 TFAP2B JASPAR yes 112514153
chr19 13274100 13274113 TFAP2C JASPAR yes 112514154
chr19 13274101 13274112 EBF1 JASPAR yes 70809308
chr19 13274101 13274112 EBF1 JASPAR yes 112514155
chr19 13274120 13274124 H1TF2 TRANSFAC yes 70809309
chr19 13274120 13274124 NFE TRANSFAC yes 70809310
chr19 13274120 13274124 SRF TRANSFAC yes 70809311
chr19 13274120 13274124 H1TF2 TRANSFAC yes 112514156
chr19 13274120 13274124 NFE TRANSFAC yes 112514157
chr19 13274120 13274124 SRF TRANSFAC yes 112514158
chr19 13274141 13274156 PRDM1 JASPAR yes 70809312
chr19 13274141 13274156 PRDM1 JASPAR yes 112514159
chr19 13274146 13274152 TCF4 TRANSFAC yes 70809313
chr19 13274146 13274152 TCF4 TRANSFAC yes 112514160
chr19 13274158 13274165 JUN TRANSFAC yes 70809314
chr19 13274158 13274165 SP1 TRANSFAC yes 70809315
chr19 13274158 13274165 JUN TRANSFAC yes 112514161
chr19 13274158 13274165 SP1 TRANSFAC yes 112514162
SNP sites on vista28699[chr19:13273540-13274187]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 13273992 rs745582 G C
E2F1 E2F4 EBF1 EGR1 MAX POLR2A SP1 SRF STAT1 TFAP2A TFAP2B TFAP2C THAP1 ZBTB7A
5449142
chr19 13274086 rs140132705 T C
E2F1 EGR1 MAX POLR2A STAT1 TFAP2A TFAP2C ZBTB7A
5449143
Genes possibly regulated by vista28699[chr19:13273540-13274187]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 13209847 13213975 - LYL1 ENSG00000104903.4 13213975 0.92 0.93 17112 40435
chr19 13215716 13228381 - TRMT1 ENSG00000104907.8 13228381 0.6 1.0 17113 54841
chr19 13228917 13251955 + NACC1 ENSG00000160877.5 13228917 0.67 1.0 17114 55377
chr19 13254872 13261197 - STX10 ENSG00000104915.10 13261197 0.58 1.0 17115 87657
chr19 13261229 13265722 + IER2 ENSG00000160888.6 13261229 0.7 1.0 17116 87689
Expression level of Genes
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miRNAs possibly regulated by vista28699[chr19:13273540-13274187]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results