EnhancerDB
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  3. vista2870[chr1:110339466-110339959]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2870[chr1:110339466-110339959]
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Tissue distribution of vista2870
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Transcription factor that possibly regulate vista2870[chr1:110339466-110339959]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 110339454 110339469 PRDM1 JASPAR yes 31439600
chr1 110339454 110339469 PRDM1 JASPAR yes 118347649
chr1 110339470 110339488 RARA JASPAR yes 31439601
chr1 110339470 110339488 RARA JASPAR yes 118347650
chr1 110339477 110339490 NR2F1 JASPAR yes 31439602
chr1 110339477 110339490 NR2F1 JASPAR yes 118347651
chr1 110339496 110339510 PLAG1 JASPAR yes 31439603
chr1 110339496 110339510 PLAG1 JASPAR yes 118347652
chr1 110339511 110339525 GATA2 JASPAR yes 31439604
chr1 110339511 110339525 GATA2 JASPAR yes 118347653
chr1 110339515 110339523 GATA3 JASPAR yes 31439605
chr1 110339515 110339523 GATA3 JASPAR yes 118347654
chr1 110339539 110339548 NFIX JASPAR yes 31439606
chr1 110339539 110339548 NFIX JASPAR yes 118347655
chr1 110339540 110339546 NFIC JASPAR yes 31439607
chr1 110339540 110339546 NFIC JASPAR yes 118347656
chr1 110339540 110339554 TLX1 JASPAR yes 31439608
chr1 110339540 110339554 TLX1 JASPAR yes 118347657
chr1 110339541 110339555 TLX1 JASPAR yes 31439609
chr1 110339541 110339555 TLX1 JASPAR yes 118347658
chr1 110339562 110339566 YY1 TRANSFAC yes 31439610
chr1 110339562 110339566 YY1 TRANSFAC yes 118347659
chr1 110339578 110339582 YY1 TRANSFAC yes 31439611
chr1 110339578 110339582 YY1 TRANSFAC yes 118347660
chr1 110339594 110339604 SP1 JASPAR yes 31439612
chr1 110339594 110339604 SP1 JASPAR yes 118347661
chr1 110339606 110339610 H4TF2 TRANSFAC yes 31439613
chr1 110339606 110339610 H4TF2 TRANSFAC yes 118347662
chr1 110339615 110339630 STAT2 JASPAR yes 31439614
chr1 110339615 110339630 STAT2 JASPAR yes 118347663
chr1 110339617 110339629 IRF1 JASPAR yes 31439615
chr1 110339617 110339629 IRF1 JASPAR yes 118347664
chr1 110339617 110339631 IRF7 JASPAR yes 31439616
chr1 110339617 110339631 IRF7 JASPAR yes 118347665
chr1 110339617 110339632 IRF9 JASPAR yes 31439617
chr1 110339617 110339632 IRF9 JASPAR yes 118347666
chr1 110339619 110339625 TCF4 TRANSFAC yes 31439618
chr1 110339619 110339625 TCF4 TRANSFAC yes 118347667
chr1 110339619 110339634 FOXP1 JASPAR yes 31439619
chr1 110339619 110339634 FOXP1 JASPAR yes 118347668
chr1 110339623 110339644 IRF1 JASPAR yes 31439620
chr1 110339623 110339644 IRF1 JASPAR yes 118347669
chr1 110339624 110339630 TCF4 TRANSFAC yes 31439621
chr1 110339624 110339630 TCF4 TRANSFAC yes 118347670
chr1 110339625 110339640 STAT2 JASPAR yes 31439622
chr1 110339625 110339640 STAT2 JASPAR yes 118347671
chr1 110339626 110339640 STAT1 JASPAR yes 31439623
chr1 110339626 110339640 STAT1 JASPAR yes 118347672
chr1 110339627 110339639 IRF1 JASPAR yes 31439624
chr1 110339627 110339639 IRF1 JASPAR yes 118347673
chr1 110339627 110339641 IRF7 JASPAR yes 31439625
chr1 110339627 110339641 IRF8 JASPAR yes 31439626
chr1 110339627 110339641 IRF7 JASPAR yes 118347674
chr1 110339627 110339641 IRF8 JASPAR yes 118347675
chr1 110339627 110339642 IRF9 JASPAR yes 31439627
chr1 110339627 110339642 IRF9 JASPAR yes 118347676
chr1 110339648 110339653 GATA1 TRANSFAC yes 31439628
chr1 110339648 110339653 GATA1 TRANSFAC yes 118347677
chr1 110339656 110339667 BATF JASPAR yes 31439629
chr1 110339656 110339667 BATF JASPAR yes 118347678
chr1 110339658 110339669 FOS JASPAR yes 31439630
chr1 110339658 110339669 FOSL1 JASPAR yes 31439631
chr1 110339658 110339669 JUND JASPAR yes 31439632
chr1 110339658 110339669 FOS JASPAR yes 118347679
chr1 110339658 110339669 FOSL1 JASPAR yes 118347680
chr1 110339658 110339669 JUND JASPAR yes 118347681
chr1 110339659 110339673 JUN JASPAR yes 31439633
chr1 110339659 110339673 JUN JASPAR yes 118347682
chr1 110339660 110339671 BATF JASPAR yes 31439634
chr1 110339660 110339671 BATF JASPAR yes 118347683
chr1 110339671 110339677 LEF1 TRANSFAC yes 31439635
chr1 110339671 110339677 SOX10 JASPAR yes 31439636
chr1 110339671 110339677 LEF1 TRANSFAC yes 118347684
chr1 110339671 110339677 SOX10 JASPAR yes 118347685
chr1 110339695 110339715 TP53 JASPAR yes 31439637
chr1 110339695 110339715 TP53 JASPAR yes 118347686
chr1 110339697 110339712 HSF1 JASPAR yes 31439638
chr1 110339697 110339712 HSF1 JASPAR yes 118347687
chr1 110339697 110339717 TP63 JASPAR yes 31439639
chr1 110339697 110339717 TP63 JASPAR yes 118347688
chr1 110339698 110339711 HSF1 JASPAR yes 31439640
chr1 110339698 110339711 HSF2 JASPAR yes 31439641
chr1 110339698 110339711 HSF4 JASPAR yes 31439642
chr1 110339698 110339711 HSF1 JASPAR yes 118347689
chr1 110339698 110339711 HSF2 JASPAR yes 118347690
chr1 110339698 110339711 HSF4 JASPAR yes 118347691
chr1 110339700 110339718 NR3C1 JASPAR yes 31439643
chr1 110339700 110339718 NR3C1 JASPAR yes 118347692
chr1 110339704 110339716 TEAD1 JASPAR yes 31439644
chr1 110339704 110339716 TEAD1 JASPAR yes 118347693
chr1 110339716 110339720 NFE TRANSFAC yes 31439645
chr1 110339716 110339720 NFE TRANSFAC yes 118347694
chr1 110339717 110339722 GATA2 JASPAR yes 31439646
chr1 110339717 110339722 GATA2 JASPAR yes 118347695
chr1 110339746 110339754 FOXC1 JASPAR yes 31439647
chr1 110339746 110339754 FOXC1 JASPAR yes 118347696
chr1 110339773 110339777 YY1 TRANSFAC yes 31439648
chr1 110339773 110339777 YY1 TRANSFAC yes 118347697
chr1 110339776 110339786 ETV6 JASPAR yes 31439649
chr1 110339776 110339786 ETV6 JASPAR yes 118347698
chr1 110339776 110339791 TFAP2C JASPAR yes 31439650
chr1 110339776 110339791 TFAP2C JASPAR yes 118347699
chr1 110339777 110339784 SPI1 JASPAR yes 31439651
chr1 110339777 110339784 SPI1 JASPAR yes 118347700
chr1 110339777 110339785 EHF JASPAR yes 31439652
chr1 110339777 110339785 EHF JASPAR yes 118347701
chr1 110339790 110339803 ELF3 JASPAR yes 31439653
chr1 110339790 110339803 ELF3 JASPAR yes 118347702
chr1 110339791 110339803 EHF JASPAR yes 31439654
chr1 110339791 110339803 EHF JASPAR yes 118347703
chr1 110339793 110339799 ETS1 JASPAR yes 31439655
chr1 110339793 110339799 SPI1 JASPAR yes 31439656
chr1 110339793 110339799 ETS1 JASPAR yes 118347704
chr1 110339793 110339799 SPI1 JASPAR yes 118347705
chr1 110339812 110339818 ESR1 TRANSFAC yes 31439657
chr1 110339812 110339818 ESR1 TRANSFAC yes 118347706
chr1 110339814 110339818 ESR1 TRANSFAC yes 31439658
chr1 110339814 110339818 ESR1 TRANSFAC yes 118347707
chr1 110339826 110339838 PBX1 JASPAR yes 31439659
chr1 110339826 110339838 PBX1 JASPAR yes 118347708
chr1 110339868 110339875 GATA1 TRANSFAC yes 31439660
chr1 110339868 110339875 GATA1 TRANSFAC yes 118347709
chr1 110339873 110339883 MYF6 JASPAR yes 31439661
chr1 110339873 110339883 MYF6 JASPAR yes 118347710
chr1 110339887 110339903 SOX4 JASPAR yes 31439662
chr1 110339887 110339903 SOX4 JASPAR yes 118347711
chr1 110339891 110339909 NR3C1 JASPAR yes 31439663
chr1 110339891 110339909 NR3C1 JASPAR yes 118347712
chr1 110339895 110339910 LEF1 JASPAR yes 31439664
chr1 110339895 110339910 LEF1 JASPAR yes 118347713
chr1 110339915 110339930 NR2C2 JASPAR yes 31439665
chr1 110339915 110339930 NR2C2 JASPAR yes 118347714
chr1 110339915 110339936 ZNF263 JASPAR yes 31439666
chr1 110339915 110339936 ZNF263 JASPAR yes 118347715
chr1 110339920 110339930 MZF1 JASPAR yes 31439667
chr1 110339920 110339930 MZF1 JASPAR yes 118347716
chr1 110339921 110339942 ZNF263 JASPAR yes 31439668
chr1 110339921 110339942 ZNF263 JASPAR yes 118347717
chr1 110339922 110339943 ZNF263 JASPAR yes 31439669
chr1 110339922 110339943 ZNF263 JASPAR yes 118347718
chr1 110339923 110339929 SP1 TRANSFAC yes 31439670
chr1 110339923 110339929 SP1 TRANSFAC yes 118347719
SNP sites on vista2870[chr1:110339466-110339959]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 110339480 rs111431449 C T
NR2F1 RARA
548221
chr1 110339521 rs149134871 T C
GATA2 GATA3
548222
chr1 110339538 rs143207856 C G no 548223
chr1 110339584 rs60245873 G A no 548224
chr1 110339687 rs56742283 G A no 548225
chr1 110339730 rs76635921 C T no 548226
chr1 110339758 rs78154372 C G no 548227
chr1 110339798 rs74903915 C A
EHF ELF3 ETS1 SPI1
548228
chr1 110339828 rs6659821 A G
PBX1
548229
Genes possibly regulated by vista2870[chr1:110339466-110339959]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 110254864 110318050 + GSTM5 ENSG00000134201.6 110254864 0.95 0.0 988 15398
chr1 110276554 110284384 - GSTM3 ENSG00000134202.6 110284384 0.84 0.83 989 44918
chr1 110292702 110306649 - EPS8L3 ENSG00000198758.6 110306649 0.98 0.98 990 67183
Expression level of Genes
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miRNAs possibly regulated by vista2870[chr1:110339466-110339959]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results