EnhancerDB
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  3. vista28701[chr19:13275397-13275802]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28701[chr19:13275397-13275802]
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Tissue distribution of vista28701
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Transcription factor that possibly regulate vista28701[chr19:13275397-13275802]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 13273159 13276000 POLR2A UCSC Txn Factor no Conserved 108389190
chr19 13273159 13276000 POLR2A UCSC Txn Factor no Conserved 108389191
chr19 13273159 13276000 POLR2A UCSC Txn Factor no Conserved 108389192
chr19 13275160 13275570 ZBTB7A UCSC Txn Factor no Conserved 108389430
chr19 13275280 13275760 ZNF263 UCSC Txn Factor no Conserved 108389456
chr19 13275304 13275645 ELF1 UCSC Txn Factor no Conserved 108389463
chr19 13275433 13275724 STAT3 UCSC Txn Factor no Conserved 108389495
chr19 13275409 13275420 NFKB1 JASPAR yes 70809424
chr19 13275409 13275420 NFKB1 JASPAR yes 112514358
chr19 13275410 13275420 NFKB1 JASPAR yes 70809425
chr19 13275410 13275420 NFKB1 JASPAR yes 112514359
chr19 13275410 13275421 NFKB1 JASPAR yes 70809426
chr19 13275410 13275421 NFKB1 JASPAR yes 112514360
chr19 13275414 13275425 EBF1 JASPAR yes 70809427
chr19 13275414 13275425 EBF1 JASPAR yes 112514361
chr19 13275415 13275421 MZF1 JASPAR yes 70809428
chr19 13275415 13275421 MZF1 JASPAR yes 112514362
chr19 13275425 13275435 GABPA JASPAR yes 70809429
chr19 13275425 13275435 GABPA JASPAR yes 112514363
chr19 13275436 13275446 MZF1 JASPAR yes 70809430
chr19 13275436 13275446 MZF1 JASPAR yes 112514364
chr19 13275439 13275448 SP1 TRANSFAC yes 70809431
chr19 13275439 13275448 SP1 TRANSFAC yes 112514365
chr19 13275439 13275449 SP1 JASPAR yes 70809432
chr19 13275439 13275449 SP1 JASPAR yes 112514366
chr19 13275440 13275449 SP1 TRANSFAC yes 70809433
chr19 13275440 13275449 SP1 TRANSFAC yes 112514367
chr19 13275441 13275447 MAZ TRANSFAC yes 70809434
chr19 13275441 13275447 MAZ TRANSFAC yes 112514368
chr19 13275459 13275468 SOX9 JASPAR yes 70809435
chr19 13275459 13275468 SOX9 JASPAR yes 112514369
chr19 13275493 13275504 ELK4 JASPAR yes 70809436
chr19 13275493 13275504 FLI1 JASPAR yes 70809437
chr19 13275493 13275504 ELK4 JASPAR yes 112514370
chr19 13275493 13275504 FLI1 JASPAR yes 112514371
chr19 13275493 13275506 ELF3 JASPAR yes 70809438
chr19 13275493 13275506 ELF3 JASPAR yes 112514372
chr19 13275494 13275504 ELK1 JASPAR yes 70809439
chr19 13275494 13275504 ELK3 JASPAR yes 70809440
chr19 13275494 13275504 ERF JASPAR yes 70809441
chr19 13275494 13275504 ERG JASPAR yes 70809442
chr19 13275494 13275504 ETS1 JASPAR yes 70809443
chr19 13275494 13275504 ETV1 JASPAR yes 70809444
chr19 13275494 13275504 ETV3 JASPAR yes 70809445
chr19 13275494 13275504 ETV4 JASPAR yes 70809446
chr19 13275494 13275504 ETV6 JASPAR yes 70809447
chr19 13275494 13275504 FEV JASPAR yes 70809448
chr19 13275494 13275504 FLI1 JASPAR yes 70809449
chr19 13275494 13275504 GABPA JASPAR yes 70809450
chr19 13275494 13275504 ELK1 JASPAR yes 112514373
chr19 13275494 13275504 ELK3 JASPAR yes 112514374
chr19 13275494 13275504 ERF JASPAR yes 112514375
chr19 13275494 13275504 ERG JASPAR yes 112514376
chr19 13275494 13275504 ETS1 JASPAR yes 112514377
chr19 13275494 13275504 ETV1 JASPAR yes 112514378
chr19 13275494 13275504 ETV3 JASPAR yes 112514379
chr19 13275494 13275504 ETV4 JASPAR yes 112514380
chr19 13275494 13275504 ETV6 JASPAR yes 112514381
chr19 13275494 13275504 FEV JASPAR yes 112514382
chr19 13275494 13275504 FLI1 JASPAR yes 112514383
chr19 13275494 13275504 GABPA JASPAR yes 112514384
chr19 13275494 13275505 ELF5 JASPAR yes 70809451
chr19 13275494 13275505 ETV2 JASPAR yes 70809452
chr19 13275494 13275505 SPDEF JASPAR yes 70809453
chr19 13275494 13275505 ELF5 JASPAR yes 112514385
chr19 13275494 13275505 ETV2 JASPAR yes 112514386
chr19 13275494 13275505 SPDEF JASPAR yes 112514387
chr19 13275494 13275506 EHF JASPAR yes 70809454
chr19 13275494 13275506 ELF1 JASPAR yes 70809455
chr19 13275494 13275506 ELF4 JASPAR yes 70809456
chr19 13275494 13275506 EHF JASPAR yes 112514388
chr19 13275494 13275506 ELF1 JASPAR yes 112514389
chr19 13275494 13275506 ELF4 JASPAR yes 112514390
chr19 13275494 13275507 ELF1 JASPAR yes 70809457
chr19 13275494 13275507 ELF1 JASPAR yes 112514391
chr19 13275494 13275508 SPI1 JASPAR yes 70809458
chr19 13275494 13275508 SPI1 JASPAR yes 112514392
chr19 13275494 13275509 STAT1 JASPAR yes 70809459
chr19 13275494 13275509 STAT1 JASPAR yes 112514393
chr19 13275495 13275502 SPI1 JASPAR yes 70809460
chr19 13275495 13275502 SPI1 JASPAR yes 112514394
chr19 13275495 13275503 EHF JASPAR yes 70809461
chr19 13275495 13275503 FEV JASPAR yes 70809462
chr19 13275495 13275503 EHF JASPAR yes 112514395
chr19 13275495 13275503 FEV JASPAR yes 112514396
chr19 13275504 13275507 MYB TRANSFAC yes 70809463
chr19 13275504 13275507 MYB TRANSFAC yes 112514397
chr19 13275545 13275549 H4TF2 TRANSFAC yes 70809464
chr19 13275545 13275549 H4TF2 TRANSFAC yes 112514398
chr19 13275556 13275566 SP1 JASPAR yes 70809465
chr19 13275556 13275566 SP1 JASPAR yes 112514399
chr19 13275558 13275563 ETS2 TRANSFAC yes 70809466
chr19 13275558 13275563 ETS2 TRANSFAC yes 112514400
chr19 13275561 13275576 NR2C2 JASPAR yes 70809467
chr19 13275561 13275576 NR2C2 JASPAR yes 112514401
chr19 13275564 13275568 LFA1 TRANSFAC yes 70809468
chr19 13275564 13275568 LFA1 TRANSFAC yes 112514402
chr19 13275571 13275586 TFAP2A JASPAR yes 70809469
chr19 13275571 13275586 TFAP2A JASPAR yes 112514403
chr19 13275573 13275588 TFAP2C JASPAR yes 70809470
chr19 13275573 13275588 TFAP2C JASPAR yes 112514404
chr19 13275574 13275585 TFAP2A JASPAR yes 70809471
chr19 13275574 13275585 TFAP2B JASPAR yes 70809472
chr19 13275574 13275585 TFAP2C JASPAR yes 70809473
chr19 13275574 13275585 TFAP2A JASPAR yes 112514405
chr19 13275574 13275585 TFAP2B JASPAR yes 112514406
chr19 13275574 13275585 TFAP2C JASPAR yes 112514407
chr19 13275574 13275586 TFAP2A JASPAR yes 70809474
chr19 13275574 13275586 TFAP2B JASPAR yes 70809475
chr19 13275574 13275586 TFAP2C JASPAR yes 70809476
chr19 13275574 13275586 TFAP2A JASPAR yes 112514408
chr19 13275574 13275586 TFAP2B JASPAR yes 112514409
chr19 13275574 13275586 TFAP2C JASPAR yes 112514410
chr19 13275578 13275588 MZF1 JASPAR yes 70809477
chr19 13275578 13275588 MZF1 JASPAR yes 112514411
chr19 13275590 13275604 E2F7 JASPAR yes 70809478
chr19 13275590 13275604 E2F7 JASPAR yes 112514412
chr19 13275603 13275606 MYB TRANSFAC yes 70809479
chr19 13275603 13275606 MYB TRANSFAC yes 112514413
chr19 13275613 13275623 ALX3 JASPAR yes 70809480
chr19 13275613 13275623 EN2 JASPAR yes 70809481
chr19 13275613 13275623 ESX1 JASPAR yes 70809482
chr19 13275613 13275623 LBX2 JASPAR yes 70809483
chr19 13275613 13275623 MIXL1 JASPAR yes 70809484
chr19 13275613 13275623 RAX JASPAR yes 70809485
chr19 13275613 13275623 ALX3 JASPAR yes 112514414
chr19 13275613 13275623 EN2 JASPAR yes 112514415
chr19 13275613 13275623 ESX1 JASPAR yes 112514416
chr19 13275613 13275623 LBX2 JASPAR yes 112514417
chr19 13275613 13275623 MIXL1 JASPAR yes 112514418
chr19 13275613 13275623 RAX JASPAR yes 112514419
chr19 13275614 13275622 ISX JASPAR yes 70809486
chr19 13275614 13275622 LHX9 JASPAR yes 70809487
chr19 13275614 13275622 LMX1B JASPAR yes 70809488
chr19 13275614 13275622 PRRX1 JASPAR yes 70809489
chr19 13275614 13275622 RAX2 JASPAR yes 70809490
chr19 13275614 13275622 SHOX JASPAR yes 70809491
chr19 13275614 13275622 UNCX JASPAR yes 70809492
chr19 13275614 13275622 ISX JASPAR yes 112514420
chr19 13275614 13275622 LHX9 JASPAR yes 112514421
chr19 13275614 13275622 LMX1B JASPAR yes 112514422
chr19 13275614 13275622 PRRX1 JASPAR yes 112514423
chr19 13275614 13275622 RAX2 JASPAR yes 112514424
chr19 13275614 13275622 SHOX JASPAR yes 112514425
chr19 13275614 13275622 UNCX JASPAR yes 112514426
chr19 13275635 13275642 NKX3-1 JASPAR yes 70809493
chr19 13275635 13275642 NKX3-1 JASPAR yes 112514427
chr19 13275642 13275652 MZF1 JASPAR yes 70809494
chr19 13275642 13275652 MZF1 JASPAR yes 112514428
chr19 13275648 13275662 JUN JASPAR yes 70809495
chr19 13275648 13275662 JUN JASPAR yes 112514429
chr19 13275652 13275663 FOS JASPAR yes 70809496
chr19 13275652 13275663 FOSL1 JASPAR yes 70809497
chr19 13275652 13275663 JUND JASPAR yes 70809498
chr19 13275652 13275663 FOS JASPAR yes 112514430
chr19 13275652 13275663 FOSL1 JASPAR yes 112514431
chr19 13275652 13275663 JUND JASPAR yes 112514432
chr19 13275653 13275667 JUN JASPAR yes 70809499
chr19 13275653 13275667 JUN JASPAR yes 112514433
chr19 13275654 13275660 JUN TRANSFAC yes 70809500
chr19 13275654 13275660 JUN TRANSFAC yes 112514434
chr19 13275654 13275667 EOMES JASPAR yes 70809501
chr19 13275654 13275667 EOMES JASPAR yes 112514435
chr19 13275656 13275666 TBR1 JASPAR yes 70809502
chr19 13275656 13275666 TBR1 JASPAR yes 112514436
chr19 13275656 13275667 TBX20 JASPAR yes 70809503
chr19 13275656 13275667 TBX2 JASPAR yes 70809504
chr19 13275656 13275667 TBX20 JASPAR yes 112514437
chr19 13275656 13275667 TBX2 JASPAR yes 112514438
chr19 13275657 13275667 TBX21 JASPAR yes 70809505
chr19 13275657 13275667 TBX21 JASPAR yes 112514439
chr19 13275658 13275666 MGA JASPAR yes 70809506
chr19 13275658 13275666 TBX15 JASPAR yes 70809507
chr19 13275658 13275666 TBX1 JASPAR yes 70809508
chr19 13275658 13275666 TBX4 JASPAR yes 70809509
chr19 13275658 13275666 TBX5 JASPAR yes 70809510
chr19 13275658 13275666 MGA JASPAR yes 112514440
chr19 13275658 13275666 TBX15 JASPAR yes 112514441
chr19 13275658 13275666 TBX1 JASPAR yes 112514442
chr19 13275658 13275666 TBX4 JASPAR yes 112514443
chr19 13275658 13275666 TBX5 JASPAR yes 112514444
chr19 13275666 13275676 TBR1 JASPAR yes 70809511
chr19 13275666 13275676 TBR1 JASPAR yes 112514445
chr19 13275674 13275687 DUXA JASPAR yes 70809512
chr19 13275674 13275687 DUXA JASPAR yes 112514446
chr19 13275675 13275686 DUX4 JASPAR yes 70809513
chr19 13275675 13275686 DUX4 JASPAR yes 112514447
chr19 13275723 13275733 SP1 JASPAR yes 70809514
chr19 13275723 13275733 SP1 JASPAR yes 112514448
chr19 13275730 13275734 LFA1 TRANSFAC yes 70809515
chr19 13275730 13275734 LFA1 TRANSFAC yes 112514449
chr19 13275762 13275769 JUN TRANSFAC yes 70809516
chr19 13275762 13275769 JUN TRANSFAC yes 112514450
chr19 13275780 13275791 NFKB1 JASPAR yes 70809517
chr19 13275780 13275791 NFKB1 JASPAR yes 112514451
chr19 13275787 13275793 MZF1 JASPAR yes 70809518
chr19 13275787 13275793 MZF1 JASPAR yes 112514452
chr19 13275792 13275798 GATA3 JASPAR yes 70809519
chr19 13275792 13275798 GATA3 JASPAR yes 112514453
SNP sites on vista28701[chr19:13275397-13275802]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 13275412 rs62109930 G A
ELF1 NFKB1 POLR2A ZBTB7A ZNF263
5449162
chr19 13275570 rs117398131 G A
ELF1 NR2C2 POLR2A STAT3 ZBTB7A ZNF263
5449163
Genes possibly regulated by vista28701[chr19:13275397-13275802]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 13209847 13213975 - LYL1 ENSG00000104903.4 13213975 0.92 0.93 17112 38578
chr19 13215716 13228381 - TRMT1 ENSG00000104907.8 13228381 0.6 1.0 17113 52984
chr19 13228917 13251955 + NACC1 ENSG00000160877.5 13228917 0.67 1.0 17114 53520
chr19 13254872 13261197 - STX10 ENSG00000104915.10 13261197 0.58 1.0 17115 85800
chr19 13261229 13265722 + IER2 ENSG00000160888.6 13261229 0.7 1.0 17116 85832
Expression level of Genes
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miRNAs possibly regulated by vista28701[chr19:13275397-13275802]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results