EnhancerDB
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  3. vista28702[chr19:13278382-13278991]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28702[chr19:13278382-13278991]
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Tissue distribution of vista28702
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Transcription factor that possibly regulate vista28702[chr19:13278382-13278991]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 13278118 13279016 POLR2A UCSC Txn Factor no Conserved 108389583
chr19 13278188 13278913 TFAP2C UCSC Txn Factor no Conserved 108389591
chr19 13278262 13278548 CEBPB UCSC Txn Factor no Conserved 108389614
chr19 13278417 13278947 EBF1 UCSC Txn Factor no Conserved 108389665
chr19 13278420 13278801 RUNX3 UCSC Txn Factor no Conserved 108389666
chr19 13278441 13278814 ELF1 UCSC Txn Factor no Conserved 108389674
chr19 13278383 13278388 SP1 TRANSFAC yes 70809520
chr19 13278383 13278388 SP1 TRANSFAC yes 112514958
chr19 13278396 13278413 RXRA JASPAR yes 70809521
chr19 13278396 13278413 RXRA JASPAR yes 112514959
chr19 13278397 13278409 E2F8 JASPAR yes 70809522
chr19 13278397 13278409 E2F8 JASPAR yes 112514960
chr19 13278406 13278417 FLI1 JASPAR yes 70809523
chr19 13278406 13278417 FLI1 JASPAR yes 112514961
chr19 13278407 13278412 ETS2 TRANSFAC yes 70809524
chr19 13278407 13278412 ETS2 TRANSFAC yes 112514962
chr19 13278407 13278415 FEV JASPAR yes 70809525
chr19 13278407 13278415 FEV JASPAR yes 112514963
chr19 13278411 13278422 FOSL2 JASPAR yes 70809526
chr19 13278411 13278422 FOSL2 JASPAR yes 112514964
chr19 13278412 13278423 NFE2 JASPAR yes 70809527
chr19 13278412 13278423 NFE2 JASPAR yes 112514965
chr19 13278419 13278432 ATF4 JASPAR yes 70809528
chr19 13278419 13278432 ATF4 JASPAR yes 112514966
chr19 13278440 13278454 PLAG1 JASPAR yes 70809529
chr19 13278440 13278454 PLAG1 JASPAR yes 112514967
chr19 13278441 13278451 SP1 JASPAR yes 70809530
chr19 13278441 13278451 SP1 JASPAR yes 112514968
chr19 13278442 13278452 SP1 JASPAR yes 70809531
chr19 13278442 13278452 SP1 JASPAR yes 112514969
chr19 13278443 13278447 LFA1 TRANSFAC yes 70809532
chr19 13278443 13278447 LFA1 TRANSFAC yes 112514970
chr19 13278448 13278454 MAZ TRANSFAC yes 70809533
chr19 13278448 13278454 MAZ TRANSFAC yes 112514971
chr19 13278456 13278460 NFE TRANSFAC yes 70809534
chr19 13278456 13278460 NFE TRANSFAC yes 112514972
chr19 13278481 13278496 HNF4G JASPAR yes 70809535
chr19 13278481 13278496 NR2C2 JASPAR yes 70809536
chr19 13278481 13278496 HNF4G JASPAR yes 112514973
chr19 13278481 13278496 NR2C2 JASPAR yes 112514974
chr19 13278482 13278496 NR2F1 JASPAR yes 70809537
chr19 13278482 13278496 NR2F1 JASPAR yes 112514975
chr19 13278482 13278497 HNF4A JASPAR yes 70809538
chr19 13278482 13278497 HNF4A JASPAR yes 112514976
chr19 13278490 13278510 ESR1 JASPAR yes 70809539
chr19 13278490 13278510 ESR1 JASPAR yes 112514977
chr19 13278498 13278503 SP1 TRANSFAC yes 70809540
chr19 13278498 13278503 SP1 TRANSFAC yes 112514978
chr19 13278498 13278505 SP1 TRANSFAC yes 70809541
chr19 13278498 13278505 SP1 TRANSFAC yes 112514979
chr19 13278498 13278508 SP1 JASPAR yes 70809542
chr19 13278498 13278508 SP1 JASPAR yes 112514980
chr19 13278504 13278509 SP1 TRANSFAC yes 70809543
chr19 13278504 13278509 SP1 TRANSFAC yes 112514981
chr19 13278510 13278522 NHLH1 JASPAR yes 70809544
chr19 13278510 13278522 NHLH1 JASPAR yes 112514982
chr19 13278511 13278521 NHLH1 JASPAR yes 70809545
chr19 13278511 13278521 NHLH1 JASPAR yes 112514983
chr19 13278518 13278528 SP1 JASPAR yes 70809546
chr19 13278518 13278528 SP1 JASPAR yes 112514984
chr19 13278540 13278555 TFAP2A JASPAR yes 70809547
chr19 13278540 13278555 TFAP2C JASPAR yes 70809548
chr19 13278540 13278555 TFAP2A JASPAR yes 112514985
chr19 13278540 13278555 TFAP2C JASPAR yes 112514986
chr19 13278541 13278555 TLX1 JASPAR yes 70809549
chr19 13278541 13278555 TLX1 JASPAR yes 112514987
chr19 13278561 13278567 NFIC JASPAR yes 70809550
chr19 13278561 13278567 NFIC JASPAR yes 112514988
chr19 13278571 13278576 USF2 TRANSFAC yes 70809551
chr19 13278571 13278576 USF2 TRANSFAC yes 112514989
chr19 13278576 13278588 GLI2 JASPAR yes 70809552
chr19 13278576 13278588 ZBTB7B JASPAR yes 70809553
chr19 13278576 13278588 ZBTB7C JASPAR yes 70809554
chr19 13278576 13278588 GLI2 JASPAR yes 112514990
chr19 13278576 13278588 ZBTB7B JASPAR yes 112514991
chr19 13278576 13278588 ZBTB7C JASPAR yes 112514992
chr19 13278577 13278597 RREB1 JASPAR yes 70809555
chr19 13278577 13278597 RREB1 JASPAR yes 112514993
chr19 13278578 13278598 RREB1 JASPAR yes 70809556
chr19 13278578 13278598 RREB1 JASPAR yes 112514994
chr19 13278579 13278600 ZNF263 JASPAR yes 70809557
chr19 13278579 13278600 ZNF263 JASPAR yes 112514995
chr19 13278580 13278600 RREB1 JASPAR yes 70809558
chr19 13278580 13278600 RREB1 JASPAR yes 112514996
chr19 13278581 13278601 RREB1 JASPAR yes 70809559
chr19 13278581 13278601 RREB1 JASPAR yes 112514997
chr19 13278582 13278592 SP1 JASPAR yes 70809560
chr19 13278582 13278592 SP1 JASPAR yes 112514998
chr19 13278583 13278593 SP1 JASPAR yes 70809561
chr19 13278583 13278593 SP1 JASPAR yes 112514999
chr19 13278584 13278604 RREB1 JASPAR yes 70809562
chr19 13278584 13278604 RREB1 JASPAR yes 112515000
chr19 13278585 13278595 ZNF740 JASPAR yes 70809563
chr19 13278585 13278595 ZNF740 JASPAR yes 112515001
chr19 13278585 13278605 RREB1 JASPAR yes 70809564
chr19 13278585 13278605 RREB1 JASPAR yes 112515002
chr19 13278586 13278598 INSM1 JASPAR yes 70809565
chr19 13278586 13278598 INSM1 JASPAR yes 112515003
chr19 13278586 13278607 ZNF263 JASPAR yes 70809566
chr19 13278586 13278607 ZNF263 JASPAR yes 112515004
chr19 13278589 13278610 ZNF263 JASPAR yes 70809567
chr19 13278589 13278610 ZNF263 JASPAR yes 112515005
chr19 13278594 13278615 ZNF263 JASPAR yes 70809568
chr19 13278594 13278615 ZNF263 JASPAR yes 112515006
chr19 13278596 13278607 FLI1 JASPAR yes 70809569
chr19 13278596 13278607 FLI1 JASPAR yes 112515007
chr19 13278598 13278606 EHF JASPAR yes 70809570
chr19 13278598 13278606 EHF JASPAR yes 112515008
chr19 13278600 13278605 ETS2 TRANSFAC yes 70809571
chr19 13278600 13278605 ETS2 TRANSFAC yes 112515009
chr19 13278629 13278641 ELF4 JASPAR yes 70809572
chr19 13278629 13278641 ELF4 JASPAR yes 112515010
chr19 13278631 13278637 ETS1 JASPAR yes 70809573
chr19 13278631 13278637 SPI1 JASPAR yes 70809574
chr19 13278631 13278637 ETS1 JASPAR yes 112515011
chr19 13278631 13278637 SPI1 JASPAR yes 112515012
chr19 13278631 13278641 ELK1 JASPAR yes 70809575
chr19 13278631 13278641 ELK1 JASPAR yes 112515013
chr19 13278659 13278669 ELK1 JASPAR yes 70809576
chr19 13278659 13278669 ELK1 JASPAR yes 112515014
chr19 13278659 13278671 EHF JASPAR yes 70809577
chr19 13278659 13278671 ELF4 JASPAR yes 70809578
chr19 13278659 13278671 EHF JASPAR yes 112515015
chr19 13278659 13278671 ELF4 JASPAR yes 112515016
chr19 13278660 13278671 ELF5 JASPAR yes 70809579
chr19 13278660 13278671 ELF5 JASPAR yes 112515017
chr19 13278661 13278671 GABPA JASPAR yes 70809580
chr19 13278661 13278671 GABPA JASPAR yes 112515018
chr19 13278663 13278669 ETS1 JASPAR yes 70809581
chr19 13278663 13278669 SPI1 JASPAR yes 70809582
chr19 13278663 13278669 ETS1 JASPAR yes 112515019
chr19 13278663 13278669 SPI1 JASPAR yes 112515020
chr19 13278678 13278694 SOX4 JASPAR yes 70809583
chr19 13278678 13278694 SOX4 JASPAR yes 112515021
chr19 13278684 13278692 DLX6 JASPAR yes 70809584
chr19 13278684 13278692 MSX1 JASPAR yes 70809585
chr19 13278684 13278692 DLX6 JASPAR yes 112515022
chr19 13278684 13278692 MSX1 JASPAR yes 112515023
chr19 13278686 13278697 JUND JASPAR yes 70809586
chr19 13278686 13278697 JUND JASPAR yes 112515024
chr19 13278687 13278698 JUNB JASPAR yes 70809587
chr19 13278687 13278698 JUNB JASPAR yes 112515025
chr19 13278687 13278701 JUN JASPAR yes 70809588
chr19 13278687 13278701 JUN JASPAR yes 112515026
chr19 13278731 13278745 CREB3L1 JASPAR yes 70809589
chr19 13278731 13278745 CREB3L1 JASPAR yes 112515027
chr19 13278731 13278752 ZNF263 JASPAR yes 70809590
chr19 13278731 13278752 ZNF263 JASPAR yes 112515028
chr19 13278736 13278756 RREB1 JASPAR yes 70809591
chr19 13278736 13278756 RREB1 JASPAR yes 112515029
chr19 13278737 13278758 ZNF263 JASPAR yes 70809592
chr19 13278737 13278758 ZNF263 JASPAR yes 112515030
chr19 13278739 13278759 RREB1 JASPAR yes 70809593
chr19 13278739 13278759 RREB1 JASPAR yes 112515031
chr19 13278747 13278752 SP1 TRANSFAC yes 70809594
chr19 13278747 13278752 SP1 TRANSFAC yes 112515032
chr19 13278752 13278757 SP1 TRANSFAC yes 70809595
chr19 13278752 13278757 SP1 TRANSFAC yes 112515033
chr19 13278758 13278769 EBF1 JASPAR yes 70809596
chr19 13278758 13278769 EBF1 JASPAR yes 112515034
chr19 13278773 13278783 MZF1 JASPAR yes 70809597
chr19 13278773 13278783 MZF1 JASPAR yes 112515035
chr19 13278774 13278793 REST JASPAR yes 70809598
chr19 13278774 13278793 REST JASPAR yes 112515036
chr19 13278790 13278802 INSM1 JASPAR yes 70809599
chr19 13278790 13278802 INSM1 JASPAR yes 112515037
chr19 13278871 13278882 FOXP2 JASPAR yes 70809600
chr19 13278871 13278882 FOXP2 JASPAR yes 112515038
chr19 13278872 13278876 TEAD2 TRANSFAC yes 70809601
chr19 13278872 13278876 TEAD2 TRANSFAC yes 112515039
chr19 13278872 13278877 TBP TRANSFAC yes 70809602
chr19 13278872 13278877 TBP TRANSFAC yes 112515040
chr19 13278882 13278895 HSF1 JASPAR yes 70809603
chr19 13278882 13278895 HSF2 JASPAR yes 70809604
chr19 13278882 13278895 HSF4 JASPAR yes 70809605
chr19 13278882 13278895 HSF1 JASPAR yes 112515041
chr19 13278882 13278895 HSF2 JASPAR yes 112515042
chr19 13278882 13278895 HSF4 JASPAR yes 112515043
chr19 13278885 13278896 NFKB1 JASPAR yes 70809606
chr19 13278885 13278896 NFKB1 JASPAR yes 112515044
chr19 13278892 13278898 TCF1 TRANSFAC yes 70809607
chr19 13278892 13278898 TCF1 TRANSFAC yes 112515045
chr19 13278901 13278905 NFE TRANSFAC yes 70809608
chr19 13278901 13278905 NFE TRANSFAC yes 112515046
chr19 13278921 13278931 NFKB1 JASPAR yes 70809609
chr19 13278921 13278931 NFKB1 JASPAR yes 112515047
chr19 13278924 13278935 E2F6 JASPAR yes 70809610
chr19 13278924 13278935 E2F6 JASPAR yes 112515048
chr19 13278930 13278941 EBF1 JASPAR yes 70809611
chr19 13278930 13278941 EBF1 JASPAR yes 112515049
chr19 13278931 13278942 EBF1 JASPAR yes 70809612
chr19 13278931 13278942 EBF1 JASPAR yes 112515050
chr19 13278944 13278949 GATA2 JASPAR yes 70809613
chr19 13278944 13278949 GATA2 JASPAR yes 112515051
chr19 13278961 13278971 MZF1 JASPAR yes 70809614
chr19 13278961 13278971 MZF1 JASPAR yes 112515052
chr19 13278966 13278971 ETS2 TRANSFAC yes 70809615
chr19 13278966 13278971 ETS2 TRANSFAC yes 112515053
chr19 13278976 13278996 TP53 JASPAR yes 70809616
chr19 13278976 13278996 TP53 JASPAR yes 112515054
SNP sites on vista28702[chr19:13278382-13278991]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 13278444 rs559833841 G A
CEBPB EBF1 ELF1 LFA1 PLAG1 POLR2A RUNX3 SP1 TFAP2C
5449190
chr19 13278446 rs551407300 G A
CEBPB EBF1 ELF1 LFA1 PLAG1 POLR2A RUNX3 SP1 TFAP2C
5449191
chr19 13278687 rs12610856 A G
DLX6 EBF1 ELF1 JUN JUNB JUND MSX1 POLR2A RUNX3 SOX4 TFAP2C
5449192
chr19 13278751 rs10415091 G A
EBF1 ELF1 POLR2A RREB1 RUNX3 SP1 TFAP2C ZNF263
5449193
chr19 13278779 rs538460345 C G
EBF1 ELF1 MZF1 POLR2A REST RUNX3 TFAP2C
5449194
chr19 13278822 rs12611196 T C
EBF1 POLR2A TFAP2C
5449195
chr19 13278823 rs76281776 G A,C
EBF1 POLR2A TFAP2C
5449196
chr19 13278841 rs534184311 A C
EBF1 POLR2A TFAP2C
5449197
Genes possibly regulated by vista28702[chr19:13278382-13278991]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 13209847 13213975 - LYL1 ENSG00000104903.4 13213975 0.92 0.93 17112 35593
chr19 13215716 13228381 - TRMT1 ENSG00000104907.8 13228381 0.6 1.0 17113 49999
chr19 13228917 13251955 + NACC1 ENSG00000160877.5 13228917 0.67 1.0 17114 50535
chr19 13254872 13261197 - STX10 ENSG00000104915.10 13261197 0.58 1.0 17115 82815
chr19 13261229 13265722 + IER2 ENSG00000160888.6 13261229 0.7 1.0 17116 82847
Expression level of Genes
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miRNAs possibly regulated by vista28702[chr19:13278382-13278991]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results