EnhancerDB
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  3. vista28712[chr19:13783472-13783589]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28712[chr19:13783472-13783589]
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Tissue distribution of vista28712
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Transcription factor that possibly regulate vista28712[chr19:13783472-13783589]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 13783267 13783677 YY1 UCSC Txn Factor no Conserved 108389899
chr19 13783362 13783746 USF1 UCSC Txn Factor no Conserved 108389909
chr19 13783413 13783715 GABPA UCSC Txn Factor no Conserved 108389918
chr19 13783480 13783720 SPI1 UCSC Txn Factor no Conserved 108389929
chr19 13783485 13783497 YY1 JASPAR yes 70810050
chr19 13783485 13783497 YY1 JASPAR yes 112527879
chr19 13783506 13783510 YY1 TRANSFAC yes 70810051
chr19 13783506 13783510 YY1 TRANSFAC yes 112527880
chr19 13783511 13783521 SP1 JASPAR yes 70810052
chr19 13783511 13783521 SP1 JASPAR yes 112527881
chr19 13783536 13783547 USF1 JASPAR yes 70810053
chr19 13783536 13783547 USF2 JASPAR yes 70810054
chr19 13783536 13783547 USF1 JASPAR yes 112527882
chr19 13783536 13783547 USF2 JASPAR yes 112527883
chr19 13783537 13783547 BHLHE41 JASPAR yes 70810055
chr19 13783537 13783547 SREBF2 JASPAR yes 70810056
chr19 13783537 13783547 TFE3 JASPAR yes 70810057
chr19 13783537 13783547 TFEB JASPAR yes 70810058
chr19 13783537 13783547 TFEC JASPAR yes 70810059
chr19 13783537 13783547 BHLHE41 JASPAR yes 112527884
chr19 13783537 13783547 SREBF2 JASPAR yes 112527885
chr19 13783537 13783547 TFE3 JASPAR yes 112527886
chr19 13783537 13783547 TFEB JASPAR yes 112527887
chr19 13783537 13783547 TFEC JASPAR yes 112527888
chr19 13783537 13783548 USF1 JASPAR yes 70810060
chr19 13783537 13783548 USF1 JASPAR yes 112527889
chr19 13783550 13783562 E2F8 JASPAR yes 70810061
chr19 13783550 13783562 E2F8 JASPAR yes 112527890
chr19 13783550 13783565 NFYB JASPAR yes 70810062
chr19 13783550 13783565 NFYB JASPAR yes 112527891
chr19 13783552 13783568 NFYA JASPAR yes 70810063
chr19 13783552 13783568 NFYA JASPAR yes 112527892
chr19 13783557 13783561 H1TF2 TRANSFAC yes 70810064
chr19 13783557 13783561 NFE TRANSFAC yes 70810065
chr19 13783557 13783561 SRF TRANSFAC yes 70810066
chr19 13783557 13783561 H1TF2 TRANSFAC yes 112527893
chr19 13783557 13783561 NFE TRANSFAC yes 112527894
chr19 13783557 13783561 SRF TRANSFAC yes 112527895
chr19 13783562 13783573 TBX2 JASPAR yes 70810067
chr19 13783562 13783573 TBX2 JASPAR yes 112527896
chr19 13783563 13783571 MGA JASPAR yes 70810068
chr19 13783563 13783571 TBX15 JASPAR yes 70810069
chr19 13783563 13783571 TBX1 JASPAR yes 70810070
chr19 13783563 13783571 TBX4 JASPAR yes 70810071
chr19 13783563 13783571 TBX5 JASPAR yes 70810072
chr19 13783563 13783571 MGA JASPAR yes 112527897
chr19 13783563 13783571 TBX15 JASPAR yes 112527898
chr19 13783563 13783571 TBX1 JASPAR yes 112527899
chr19 13783563 13783571 TBX4 JASPAR yes 112527900
chr19 13783563 13783571 TBX5 JASPAR yes 112527901
chr19 13783567 13783580 ELF1 JASPAR yes 70810073
chr19 13783567 13783580 ELF1 JASPAR yes 112527902
chr19 13783570 13783577 SPIB JASPAR yes 70810074
chr19 13783570 13783577 SPIB JASPAR yes 112527903
chr19 13783570 13783580 ETV6 JASPAR yes 70810075
chr19 13783570 13783580 GABPA JASPAR yes 70810076
chr19 13783570 13783580 ETV6 JASPAR yes 112527904
chr19 13783570 13783580 GABPA JASPAR yes 112527905
chr19 13783570 13783581 ELK4 JASPAR yes 70810077
chr19 13783570 13783581 FLI1 JASPAR yes 70810078
chr19 13783570 13783581 ELK4 JASPAR yes 112527906
chr19 13783570 13783581 FLI1 JASPAR yes 112527907
chr19 13783571 13783579 EHF JASPAR yes 70810079
chr19 13783571 13783579 EHF JASPAR yes 112527908
chr19 13783572 13783579 SPI1 JASPAR yes 70810080
chr19 13783572 13783579 SPI1 JASPAR yes 112527909
chr19 13783578 13783590 TGIF2 JASPAR yes 70810081
chr19 13783578 13783590 TGIF2 JASPAR yes 112527910
chr19 13783587 13783598 ELK4 JASPAR yes 70810082
chr19 13783587 13783598 FLI1 JASPAR yes 70810083
chr19 13783587 13783598 ELK4 JASPAR yes 112527911
chr19 13783587 13783598 FLI1 JASPAR yes 112527912
chr19 13783587 13783600 ELF3 JASPAR yes 70810084
chr19 13783587 13783600 ELF3 JASPAR yes 112527913
chr19 13783588 13783598 ETV6 JASPAR yes 70810085
chr19 13783588 13783598 GABPA JASPAR yes 70810086
chr19 13783588 13783598 ETV6 JASPAR yes 112527914
chr19 13783588 13783598 GABPA JASPAR yes 112527915
chr19 13783588 13783599 ELF5 JASPAR yes 70810087
chr19 13783588 13783599 SPDEF JASPAR yes 70810088
chr19 13783588 13783599 ELF5 JASPAR yes 112527916
chr19 13783588 13783599 SPDEF JASPAR yes 112527917
chr19 13783588 13783600 EHF JASPAR yes 70810089
chr19 13783588 13783600 ELF1 JASPAR yes 70810090
chr19 13783588 13783600 ELF4 JASPAR yes 70810091
chr19 13783588 13783600 EHF JASPAR yes 112527918
chr19 13783588 13783600 ELF1 JASPAR yes 112527919
chr19 13783588 13783600 ELF4 JASPAR yes 112527920
chr19 13783588 13783601 ELF1 JASPAR yes 70810092
chr19 13783588 13783601 ELF1 JASPAR yes 112527921
chr19 13783588 13783602 SPI1 JASPAR yes 70810093
chr19 13783588 13783602 SPI1 JASPAR yes 112527922
chr19 13783589 13783596 SPI1 JASPAR yes 70810094
chr19 13783589 13783596 SPI1 JASPAR yes 112527923
chr19 13783589 13783597 EHF JASPAR yes 70810095
chr19 13783589 13783597 FEV JASPAR yes 70810096
chr19 13783589 13783597 EHF JASPAR yes 112527924
chr19 13783589 13783597 FEV JASPAR yes 112527925
SNP sites on vista28712[chr19:13783472-13783589]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 13783519 rs574792595 T C
GABPA SP1 SPI1 USF1 YY1
5450806
chr19 13783561 rs74766176 A G
E2F8 GABPA H1TF2 NFE NFYA NFYB SPI1 SRF USF1 YY1
5450807
Genes possibly regulated by vista28712[chr19:13783472-13783589]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 13317256 13734804 - CACNA1A ENSG00000141837.14 13734804 0.87 1.0 17117 51332
chr19 13842574 13874110 + CCDC130 ENSG00000104957.9 13842574 0.62 1.0 17118 41015
chr19 13875346 13885096 + MRI1 ENSG00000037757.9 13875346 0.63 0.99 17119 8243
Expression level of Genes
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miRNAs possibly regulated by vista28712[chr19:13783472-13783589]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results