EnhancerDB
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  3. vista2872[chr1:110358971-110359415]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2872[chr1:110358971-110359415]
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Tissue distribution of vista2872
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Transcription factor that possibly regulate vista2872[chr1:110358971-110359415]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 110358960 110359439 RUNX3 UCSC Txn Factor no Conserved 107820049
chr1 110359011 110359427 NFIC UCSC Txn Factor no Conserved 107820053
chr1 110359066 110359398 MEF2A UCSC Txn Factor no Conserved 107820058
chr1 110359084 110359349 MEF2C UCSC Txn Factor no Conserved 107820062
chr1 110359085 110359453 ATF2 UCSC Txn Factor no Conserved 107820065
chr1 110359154 110359398 SPI1 UCSC Txn Factor no Conserved 107820074
chr1 110358971 110358983 PKNOX2 JASPAR yes 31442471
chr1 110358971 110358983 PKNOX2 JASPAR yes 118347736
chr1 110358980 110358990 SP1 JASPAR yes 31442472
chr1 110358980 110358990 SP1 JASPAR yes 118347737
chr1 110358980 110359001 ZNF263 JASPAR yes 31442473
chr1 110358980 110359001 ZNF263 JASPAR yes 118347738
chr1 110358981 110358988 CEBPA TRANSFAC yes 31442474
chr1 110358981 110358988 CEBPA TRANSFAC yes 118347739
chr1 110358993 110358999 ZNF354C JASPAR yes 31442475
chr1 110358993 110358999 ZNF354C JASPAR yes 118347740
chr1 110359025 110359045 RREB1 JASPAR yes 31442476
chr1 110359025 110359045 RREB1 JASPAR yes 118347741
chr1 110359028 110359048 RREB1 JASPAR yes 31442477
chr1 110359028 110359048 RREB1 JASPAR yes 118347742
chr1 110359039 110359058 RFX2 JASPAR yes 31442478
chr1 110359039 110359058 RFX2 JASPAR yes 118347743
chr1 110359043 110359062 RFX2 JASPAR yes 31442479
chr1 110359043 110359062 RFX2 JASPAR yes 118347744
chr1 110359045 110359060 RFX5 JASPAR yes 31442480
chr1 110359045 110359060 RFX5 JASPAR yes 118347745
chr1 110359051 110359063 ZBTB7A JASPAR yes 31442481
chr1 110359051 110359063 ZBTB7A JASPAR yes 118347746
chr1 110359052 110359064 ZBTB7C JASPAR yes 31442482
chr1 110359052 110359064 ZBTB7C JASPAR yes 118347747
chr1 110359053 110359063 RUNX3 JASPAR yes 31442483
chr1 110359053 110359063 RUNX3 JASPAR yes 118347748
chr1 110359072 110359086 ZIC1 JASPAR yes 31442484
chr1 110359072 110359086 ZIC1 JASPAR yes 118347749
chr1 110359072 110359087 ZIC3 JASPAR yes 31442485
chr1 110359072 110359087 ZIC4 JASPAR yes 31442486
chr1 110359072 110359087 ZIC3 JASPAR yes 118347750
chr1 110359072 110359087 ZIC4 JASPAR yes 118347751
chr1 110359075 110359081 MZF1 JASPAR yes 31442487
chr1 110359075 110359081 MZF1 JASPAR yes 118347752
chr1 110359128 110359143 HNF4G JASPAR yes 31442488
chr1 110359128 110359143 NR2C2 JASPAR yes 31442489
chr1 110359128 110359143 HNF4G JASPAR yes 118347753
chr1 110359128 110359143 NR2C2 JASPAR yes 118347754
chr1 110359129 110359143 NR2F1 JASPAR yes 31442490
chr1 110359129 110359143 NR2F1 JASPAR yes 118347755
chr1 110359129 110359144 HNF4A JASPAR yes 31442491
chr1 110359129 110359144 HNF4A JASPAR yes 118347756
chr1 110359140 110359150 HOXA13 JASPAR yes 31442492
chr1 110359140 110359150 HOXA13 JASPAR yes 118347757
chr1 110359143 110359164 IRF1 JASPAR yes 31442493
chr1 110359143 110359164 IRF1 JASPAR yes 118347758
chr1 110359144 110359150 TBP TRANSFAC yes 31442494
chr1 110359144 110359150 TBP TRANSFAC yes 118347759
chr1 110359145 110359160 IRF9 JASPAR yes 31442495
chr1 110359145 110359160 IRF9 JASPAR yes 118347760
chr1 110359146 110359160 IRF7 JASPAR yes 31442496
chr1 110359146 110359160 IRF7 JASPAR yes 118347761
chr1 110359147 110359161 STAT1 JASPAR yes 31442497
chr1 110359147 110359161 STAT1 JASPAR yes 118347762
chr1 110359148 110359160 IRF1 JASPAR yes 31442498
chr1 110359148 110359160 IRF1 JASPAR yes 118347763
chr1 110359149 110359164 FOXP1 JASPAR yes 31442499
chr1 110359149 110359164 FOXP1 JASPAR yes 118347764
chr1 110359150 110359161 FOXA1 JASPAR yes 31442500
chr1 110359150 110359161 FOXA1 JASPAR yes 118347765
chr1 110359152 110359163 FOXP2 JASPAR yes 31442501
chr1 110359152 110359163 FOXP2 JASPAR yes 118347766
chr1 110359153 110359161 FOXO3 JASPAR yes 31442502
chr1 110359153 110359161 FOXO3 JASPAR yes 118347767
chr1 110359159 110359179 RREB1 JASPAR yes 31442503
chr1 110359159 110359179 RREB1 JASPAR yes 118347768
chr1 110359164 110359179 MEF2C JASPAR yes 31442504
chr1 110359164 110359179 MEF2C JASPAR yes 118347769
chr1 110359165 110359180 MEF2A JASPAR yes 31442505
chr1 110359165 110359180 MEF2A JASPAR yes 118347770
chr1 110359174 110359177 MYB TRANSFAC yes 31442506
chr1 110359174 110359177 MYB TRANSFAC yes 118347771
chr1 110359183 110359201 SRF JASPAR yes 31442507
chr1 110359183 110359201 SRF JASPAR yes 118347772
chr1 110359185 110359200 MEF2C JASPAR yes 31442508
chr1 110359185 110359200 MEF2C JASPAR yes 118347773
chr1 110359187 110359199 MEF2B JASPAR yes 31442509
chr1 110359187 110359199 MEF2D JASPAR yes 31442510
chr1 110359187 110359199 MEF2B JASPAR yes 118347774
chr1 110359187 110359199 MEF2D JASPAR yes 118347775
chr1 110359216 110359220 YY1 TRANSFAC yes 31442511
chr1 110359216 110359220 YY1 TRANSFAC yes 118347776
chr1 110359232 110359243 HOXC12 JASPAR yes 31442512
chr1 110359232 110359243 HOXC12 JASPAR yes 118347777
chr1 110359233 110359243 HOXD11 JASPAR yes 31442513
chr1 110359233 110359243 HOXD11 JASPAR yes 118347778
chr1 110359242 110359252 TBR1 JASPAR yes 31442514
chr1 110359242 110359252 TBR1 JASPAR yes 118347779
chr1 110359242 110359263 ZNF263 JASPAR yes 31442515
chr1 110359242 110359263 ZNF263 JASPAR yes 118347780
chr1 110359246 110359257 FLI1 JASPAR yes 31442516
chr1 110359246 110359257 FLI1 JASPAR yes 118347781
chr1 110359246 110359259 ELF3 JASPAR yes 31442517
chr1 110359246 110359259 ELF3 JASPAR yes 118347782
chr1 110359247 110359257 ETV6 JASPAR yes 31442518
chr1 110359247 110359257 ETV6 JASPAR yes 118347783
chr1 110359247 110359258 ELF5 JASPAR yes 31442519
chr1 110359247 110359258 ELF5 JASPAR yes 118347784
chr1 110359247 110359259 EHF JASPAR yes 31442520
chr1 110359247 110359259 ELF1 JASPAR yes 31442521
chr1 110359247 110359259 ELF4 JASPAR yes 31442522
chr1 110359247 110359259 EHF JASPAR yes 118347785
chr1 110359247 110359259 ELF1 JASPAR yes 118347786
chr1 110359247 110359259 ELF4 JASPAR yes 118347787
chr1 110359247 110359260 ELF1 JASPAR yes 31442523
chr1 110359247 110359260 ELF1 JASPAR yes 118347788
chr1 110359248 110359255 SPI1 JASPAR yes 31442524
chr1 110359248 110359255 SPI1 JASPAR yes 118347789
chr1 110359248 110359256 EHF JASPAR yes 31442525
chr1 110359248 110359256 EHF JASPAR yes 118347790
chr1 110359291 110359306 MEF2A JASPAR yes 31442526
chr1 110359291 110359306 MEF2A JASPAR yes 118347791
chr1 110359293 110359305 MEF2A JASPAR yes 31442527
chr1 110359293 110359305 MEF2B JASPAR yes 31442528
chr1 110359293 110359305 MEF2D JASPAR yes 31442529
chr1 110359293 110359305 MEF2A JASPAR yes 118347792
chr1 110359293 110359305 MEF2B JASPAR yes 118347793
chr1 110359293 110359305 MEF2D JASPAR yes 118347794
chr1 110359294 110359304 MEF2A JASPAR yes 31442530
chr1 110359294 110359304 MEF2A JASPAR yes 118347795
chr1 110359311 110359324 JUN JASPAR yes 31442531
chr1 110359311 110359324 JUN JASPAR yes 118347796
chr1 110359312 110359325 ATF4 JASPAR yes 31442532
chr1 110359312 110359325 ATF4 JASPAR yes 118347797
chr1 110359313 110359325 JDP2 JASPAR yes 31442533
chr1 110359313 110359325 JDP2 JASPAR yes 118347798
chr1 110359315 110359326 NFIL3 JASPAR yes 31442534
chr1 110359315 110359326 NFIL3 JASPAR yes 118347799
chr1 110359331 110359342 FOSL2 JASPAR yes 31442535
chr1 110359331 110359342 FOSL2 JASPAR yes 118347800
chr1 110359336 110359345 SNAI2 JASPAR yes 31442536
chr1 110359336 110359345 SNAI2 JASPAR yes 118347801
chr1 110359337 110359342 USF2 TRANSFAC yes 31442537
chr1 110359337 110359342 USF2 TRANSFAC yes 118347802
chr1 110359346 110359352 ZNF354C JASPAR yes 31442538
chr1 110359346 110359352 ZNF354C JASPAR yes 118347803
chr1 110359396 110359410 GLIS2 JASPAR yes 31442539
chr1 110359396 110359410 ZIC1 JASPAR yes 31442540
chr1 110359396 110359410 GLIS2 JASPAR yes 118347804
chr1 110359396 110359410 ZIC1 JASPAR yes 118347805
chr1 110359396 110359411 ZIC3 JASPAR yes 31442541
chr1 110359396 110359411 ZIC4 JASPAR yes 31442542
chr1 110359396 110359411 ZIC3 JASPAR yes 118347806
chr1 110359396 110359411 ZIC4 JASPAR yes 118347807
SNP sites on vista2872[chr1:110358971-110359415]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 110359004 rs533535727 A G
RUNX3
548467
chr1 110359195 rs138361728 A G
ATF2 MEF2A MEF2B MEF2C MEF2D NFIC RUNX3 SPI1 SRF
548468
chr1 110359211 rs79807850 T C
ATF2 MEF2A MEF2C NFIC RUNX3 SPI1
548469
chr1 110359280 rs149645485 C G
ATF2 MEF2A MEF2C NFIC RUNX3 SPI1
548470
chr1 110359385 rs72705284 C T
ATF2 MEF2A NFIC RUNX3 SPI1
548471
Genes possibly regulated by vista2872[chr1:110358971-110359415]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 110276554 110284384 - GSTM3 ENSG00000134202.6 110284384 0.84 0.83 989 25413
chr1 110292702 110306649 - EPS8L3 ENSG00000198758.6 110306649 0.98 0.98 990 47678
chr1 110452864 110473614 + CSF1 ENSG00000184371.9 110452864 0.71 0.98 991 6551
Expression level of Genes
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miRNAs possibly regulated by vista2872[chr1:110358971-110359415]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results