EnhancerDB
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  3. vista28722[chr19:13972364-13973309]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28722[chr19:13972364-13973309]
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Tissue distribution of vista28722
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Transcription factor that possibly regulate vista28722[chr19:13972364-13973309]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 13972075 13973437 POLR2A UCSC Txn Factor no Conserved 108390589
chr19 13972137 13972461 YY1 UCSC Txn Factor no Conserved 108390592
chr19 13972484 13972892 EBF1 UCSC Txn Factor no Conserved 108390602
chr19 13972509 13972950 RELA UCSC Txn Factor no Conserved 108390610
chr19 13972559 13972893 JUND UCSC Txn Factor no Conserved 108390622
chr19 13972595 13972967 BCL3 UCSC Txn Factor no Conserved 108390639
chr19 13972605 13972991 TFAP2C UCSC Txn Factor no Conserved 108390643
chr19 13972607 13972810 BATF UCSC Txn Factor no Conserved 108390645
chr19 13972615 13972975 TFAP2A UCSC Txn Factor no Conserved 108390650
chr19 13972635 13972843 EGR1 UCSC Txn Factor no Conserved 108390663
chr19 13972867 13973430 ZNF263 UCSC Txn Factor no Conserved 108390688
chr19 13973064 13973417 CTCF UCSC Txn Factor no Conserved 108390708
chr19 13973100 13973370 SMC3 UCSC Txn Factor no Conserved 108390718
chr19 13973104 13973360 RAD21 UCSC Txn Factor no Conserved 108390724
chr19 13972369 13972374 SP1 TRANSFAC yes 70810855
chr19 13972379 13972385 PEA3 TRANSFAC yes 70810856
chr19 13972382 13972392 REL JASPAR yes 70810857
chr19 13972387 13972398 GCM1 JASPAR yes 70810858
chr19 13972388 13972398 GCM2 JASPAR yes 70810859
chr19 13972417 13972427 NFKB1 JASPAR yes 70810860
chr19 13972444 13972458 MTF1 JASPAR yes 70810861
chr19 13972455 13972465 GCM2 JASPAR yes 70810862
chr19 13972475 13972486 NFKB1 JASPAR yes 70810863
chr19 13972476 13972480 LFA1 TRANSFAC yes 70810864
chr19 13972508 13972514 ZNF354C JASPAR yes 70810865
chr19 13972520 13972535 RFX5 JASPAR yes 70810866
chr19 13972521 13972525 H1TF2 TRANSFAC yes 70810867
chr19 13972521 13972525 NFE TRANSFAC yes 70810868
chr19 13972521 13972525 SRF TRANSFAC yes 70810869
chr19 13972529 13972544 TFAP2A JASPAR yes 70810870
chr19 13972532 13972544 TFAP2A JASPAR yes 70810871
chr19 13972532 13972544 TFAP2B JASPAR yes 70810872
chr19 13972532 13972544 TFAP2C JASPAR yes 70810873
chr19 13972532 13972547 TFAP2A JASPAR yes 70810874
chr19 13972539 13972553 PLAG1 JASPAR yes 70810875
chr19 13972567 13972578 DUX4 JASPAR yes 70810876
chr19 13972585 13972598 SMAD2 JASPAR yes 70810877
chr19 13972610 13972614 H4TF2 TRANSFAC yes 70810878
chr19 13972610 13972626 RFX3 JASPAR yes 70810879
chr19 13972611 13972630 RFX2 JASPAR yes 70810880
chr19 13972612 13972618 MZF1 JASPAR yes 70810881
chr19 13972618 13972629 NFKB1 JASPAR yes 70810882
chr19 13972620 13972632 ZBTB7B JASPAR yes 70810883
chr19 13972623 13972636 TFAP2A JASPAR yes 70810884
chr19 13972623 13972636 TFAP2B JASPAR yes 70810885
chr19 13972623 13972636 TFAP2C JASPAR yes 70810886
chr19 13972623 13972637 EBF1 JASPAR yes 70810887
chr19 13972624 13972635 EBF1 JASPAR yes 70810888
chr19 13972661 13972674 ELF1 JASPAR yes 70810889
chr19 13972669 13972679 MSC JASPAR yes 70810890
chr19 13972690 13972699 TFAP2A JASPAR yes 70810891
chr19 13972694 13972705 NFKB1 JASPAR yes 70810892
chr19 13972704 13972715 FOSL2 JASPAR yes 70810893
chr19 13972704 13972715 JUNB JASPAR yes 70810894
chr19 13972705 13972716 FOS JASPAR yes 70810895
chr19 13972705 13972716 FOSL1 JASPAR yes 70810896
chr19 13972705 13972716 JUND JASPAR yes 70810897
chr19 13972706 13972715 JDP2 JASPAR yes 70810898
chr19 13972706 13972717 FOSL2 JASPAR yes 70810899
chr19 13972706 13972717 JUNB JASPAR yes 70810900
chr19 13972706 13972717 NFE2L2 JASPAR yes 70810901
chr19 13972706 13972720 JUN JASPAR yes 70810902
chr19 13972707 13972714 JUN TRANSFAC yes 70810903
chr19 13972707 13972718 BATF JASPAR yes 70810904
chr19 13972723 13972728 SP1 TRANSFAC yes 70810905
chr19 13972725 13972740 RFX5 JASPAR yes 70810906
chr19 13972737 13972742 TFAP2A TRANSFAC yes 70810907
chr19 13972737 13972743 MZF1 JASPAR yes 70810908
chr19 13972740 13972760 RREB1 JASPAR yes 70810909
chr19 13972745 13972766 ZNF263 JASPAR yes 70810910
chr19 13972747 13972761 PLAG1 JASPAR yes 70810911
chr19 13972753 13972763 MZF1 JASPAR yes 70810912
chr19 13972753 13972768 NR2C2 JASPAR yes 70810913
chr19 13972756 13972766 SP1 JASPAR yes 70810914
chr19 13972757 13972767 SP1 JASPAR yes 70810915
chr19 13972759 13972765 MAZ TRANSFAC yes 70810916
chr19 13972763 13972767 LFA1 TRANSFAC yes 70810917
chr19 13972774 13972779 SP1 TRANSFAC yes 70810918
chr19 13972775 13972787 TFAP2A JASPAR yes 70810919
chr19 13972775 13972787 TFAP2B JASPAR yes 70810920
chr19 13972775 13972787 TFAP2C JASPAR yes 70810921
chr19 13972780 13972792 PROX1 JASPAR yes 70810922
chr19 13972797 13972808 NFKB1 JASPAR yes 70810923
chr19 13972797 13972810 NFKB1 JASPAR yes 70810924
chr19 13972797 13972810 NFKB2 JASPAR yes 70810925
chr19 13972798 13972808 NFKB1 JASPAR yes 70810926
chr19 13972798 13972808 RELA JASPAR yes 70810927
chr19 13972798 13972809 NFKB1 JASPAR yes 70810928
chr19 13972800 13972821 ZNF263 JASPAR yes 70810929
chr19 13972834 13972845 EBF1 JASPAR yes 70810930
chr19 13972838 13972843 TFAP2A TRANSFAC yes 70810931
chr19 13972838 13972844 MZF1 JASPAR yes 70810932
chr19 13972839 13972850 NFKB1 JASPAR yes 70810933
chr19 13972849 13972870 ZNF263 JASPAR yes 70810934
chr19 13972871 13972880 TFAP2A JASPAR yes 70810935
chr19 13972875 13972881 SP1 TRANSFAC yes 70810936
chr19 13972876 13972881 SP1 TRANSFAC yes 70810937
chr19 13972876 13972892 NFYA JASPAR yes 70810938
chr19 13972879 13972894 NFYB JASPAR yes 70810939
chr19 13972881 13972886 NFY TRANSFAC yes 70810940
chr19 13972918 13972928 SREBF2 JASPAR yes 70810941
chr19 13972923 13972937 RORA JASPAR yes 70810942
chr19 13972924 13972934 RORA JASPAR yes 70810943
chr19 13972935 13972943 TEAD3 JASPAR yes 70810944
chr19 13972946 13972954 SMAD4 TRANSFAC yes 70810945
chr19 13972948 13972953 SP1 TRANSFAC yes 70810946
chr19 13972950 13972957 SP1 TRANSFAC yes 70810947
chr19 13972951 13972958 SP1 TRANSFAC yes 70810948
chr19 13972952 13972957 SP1 TRANSFAC yes 70810949
chr19 13972952 13972958 SP1 TRANSFAC yes 70810950
chr19 13973018 13973022 YY1 TRANSFAC yes 70810951
chr19 13973036 13973048 INSM1 JASPAR yes 70810952
chr19 13973049 13973053 YY1 TRANSFAC yes 70810953
chr19 13973059 13973064 SP1 TRANSFAC yes 70810954
chr19 13973064 13973072 EHF JASPAR yes 70810955
chr19 13973066 13973071 ETS2 TRANSFAC yes 70810956
chr19 13973073 13973078 TFAP2A TRANSFAC yes 70810957
chr19 13973073 13973079 MZF1 JASPAR yes 70810958
chr19 13973084 13973088 YY1 TRANSFAC yes 70810959
chr19 13973147 13973168 ZNF263 JASPAR yes 70810960
chr19 13973150 13973171 ZNF263 JASPAR yes 70810961
chr19 13973152 13973163 E2F4 JASPAR yes 70810962
chr19 13973153 13973158 SP1 TRANSFAC yes 70810963
chr19 13973153 13973159 SP1 TRANSFAC yes 70810964
chr19 13973155 13973176 ZNF263 JASPAR yes 70810965
chr19 13973158 13973168 SP1 JASPAR yes 70810966
chr19 13973159 13973166 CEBPA TRANSFAC yes 70810967
chr19 13973161 13973171 MZF1 JASPAR yes 70810968
chr19 13973164 13973174 SP1 JASPAR yes 70810969
chr19 13973209 13973221 NHLH1 JASPAR yes 70810970
chr19 13973209 13973222 ZBTB18 JASPAR yes 70810971
chr19 13973210 13973220 NHLH1 JASPAR yes 70810972
chr19 13973217 13973223 MAZ TRANSFAC yes 70810973
chr19 13973226 13973241 HNF4A JASPAR yes 70810974
chr19 13973234 13973253 CTCF JASPAR yes 70810975
chr19 13973236 13973242 NFE2 TRANSFAC yes 70810976
chr19 13973237 13973251 ZIC1 JASPAR yes 70810977
chr19 13973237 13973252 ZIC3 JASPAR yes 70810978
chr19 13973237 13973252 ZIC4 JASPAR yes 70810979
chr19 13973256 13973264 FEV JASPAR yes 70810980
chr19 13973258 13973268 RELA JASPAR yes 70810981
chr19 13973275 13973285 MSC JASPAR yes 70810982
chr19 13973286 13973290 H4TF2 TRANSFAC yes 70810983
SNP sites on vista28722[chr19:13972364-13973309]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 13972417 rs190135043 C G
NFKB1 POLR2A YY1
5452245
chr19 13972431 rs571803075 G A
POLR2A YY1
5452246
chr19 13972512 rs368069343 C T
EBF1 POLR2A RELA ZNF354C
5452247
chr19 13972758 rs544809270 G A,C
BATF BCL3 EBF1 EGR1 JUND MZF1 NR2C2 PLAG1 POLR2A RELA RREB1 SP1 TFAP2A TFAP2C ZNF263
5452248
chr19 13972924 rs115721056 C G
BCL3 POLR2A RELA RORA SREBF2 TFAP2A TFAP2C ZNF263
5452249
chr19 13973031 rs143701422 C G
POLR2A ZNF263
5452250
chr19 13973120 rs182730476 A C
CTCF POLR2A RAD21 SMC3 ZNF263
5452251
chr19 13973148 rs73511593 G A
CTCF POLR2A RAD21 SMC3 ZNF263
5452252
chr19 13973151 rs76869802 G A
CTCF POLR2A RAD21 SMC3 ZNF263
5452253
chr19 13973168 rs554336887 G A
CTCF MZF1 POLR2A RAD21 SMC3 SP1 ZNF263
5452254
chr19 13973186 rs79253455 A G
CTCF POLR2A RAD21 SMC3 ZNF263
5452255
chr19 13973303 rs566428008 C CG
CTCF POLR2A RAD21 SMC3 ZNF263
5452256
Genes possibly regulated by vista28722[chr19:13972364-13973309]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 13875346 13885096 + MRI1 ENSG00000037757.9 13875346 0.63 0.99 17119 2982
chr19 13884982 13889276 + C19orf53 ENSG00000104979.4 13884982 0.58 0.99 17120 12618
chr19 13890884 13900972 - AC008686.1 ENSG00000214109.3 13900972 1.0 1.0 17121 28608
chr19 13906274 13943044 + ZSWIM4 ENSG00000132003.5 13906274 0.69 1.0 17122 33910
chr19 13972877 13991571 + NANOS3 ENSG00000187556.6 13972877 0.81 1.0 17123 0
chr19 13993161 14017265 - C19orf57 ENSG00000132016.7 14017265 0.81 1.0 17124 56044
chr19 14017014 14041692 + CC2D1A ENSG00000132024.13 14017014 0.56 1.0 17125 56295
chr19 14042000 14064204 - PODNL1 ENSG00000132000.7 14064204 0.89 0.99 17126 9105
chr19 14063304 14072254 + DCAF15 ENSG00000132017.6 14063304 0.67 1.0 17127 10005
Expression level of Genes
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miRNAs possibly regulated by vista28722[chr19:13972364-13973309]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results