EnhancerDB
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  3. vista28723[chr19:13975574-13976059]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28723[chr19:13975574-13976059]
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Tissue distribution of vista28723
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Transcription factor that possibly regulate vista28723[chr19:13975574-13976059]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 13975578 13975582 NFE TRANSFAC yes 70810984
chr19 13975595 13975610 FOXA1 JASPAR yes 70810985
chr19 13975609 13975619 MAX JASPAR yes 70810986
chr19 13975618 13975637 CTCF JASPAR yes 70810987
chr19 13975621 13975633 TFAP2A JASPAR yes 70810988
chr19 13975621 13975633 TFAP2B JASPAR yes 70810989
chr19 13975621 13975633 TFAP2C JASPAR yes 70810990
chr19 13975622 13975631 TFAP2A JASPAR yes 70810991
chr19 13975652 13975662 HOXC10 JASPAR yes 70810992
chr19 13975652 13975662 HOXD11 JASPAR yes 70810993
chr19 13975652 13975662 HOXD13 JASPAR yes 70810994
chr19 13975652 13975663 HOXA10 JASPAR yes 70810995
chr19 13975652 13975663 HOXC11 JASPAR yes 70810996
chr19 13975652 13975663 HOXC12 JASPAR yes 70810997
chr19 13975652 13975663 HOXC13 JASPAR yes 70810998
chr19 13975652 13975663 HOXD12 JASPAR yes 70810999
chr19 13975653 13975662 CDX1 JASPAR yes 70811000
chr19 13975653 13975664 CDX2 JASPAR yes 70811001
chr19 13975657 13975669 GLI2 JASPAR yes 70811002
chr19 13975681 13975686 SP1 TRANSFAC yes 70811003
chr19 13975682 13975692 GCM2 JASPAR yes 70811004
chr19 13975685 13975697 HES7 JASPAR yes 70811005
chr19 13975690 13975711 ZNF263 JASPAR yes 70811006
chr19 13975697 13975707 ZNF740 JASPAR yes 70811007
chr19 13975701 13975707 SP1 TRANSFAC yes 70811008
chr19 13975703 13975717 EBF1 JASPAR yes 70811009
chr19 13975717 13975730 SMAD2 JASPAR yes 70811010
chr19 13975726 13975738 INSM1 JASPAR yes 70811011
chr19 13975737 13975742 MYC TRANSFAC yes 70811012
chr19 13975767 13975773 SOX10 JASPAR yes 70811013
chr19 13975772 13975783 NRF1 JASPAR yes 70811014
chr19 13975780 13975795 ZIC3 JASPAR yes 70811015
chr19 13975784 13975793 TFAP2A JASPAR yes 70811016
chr19 13975817 13975821 H4TF2 TRANSFAC yes 70811017
chr19 13975828 13975837 HIC2 JASPAR yes 70811018
chr19 13975830 13975837 SP1 TRANSFAC yes 70811019
chr19 13975832 13975837 SP1 TRANSFAC yes 70811020
chr19 13975832 13975843 NRF1 JASPAR yes 70811021
chr19 13975890 13975910 TP53 JASPAR yes 70811022
chr19 13975896 13975909 NFKB2 JASPAR yes 70811023
chr19 13975897 13975908 NFKB1 JASPAR yes 70811024
chr19 13975897 13975910 NFKB1 JASPAR yes 70811025
chr19 13975898 13975902 LFA1 TRANSFAC yes 70811026
chr19 13975898 13975908 NFKB1 JASPAR yes 70811027
chr19 13975970 13975975 SP1 TRANSFAC yes 70811028
chr19 13975985 13976006 ZNF263 JASPAR yes 70811029
chr19 13975989 13975996 CEBPA TRANSFAC yes 70811030
chr19 13975990 13976001 E2F6 JASPAR yes 70811031
chr19 13975992 13976000 SP1 TRANSFAC yes 70811032
chr19 13975992 13976002 SP1 JASPAR yes 70811033
chr19 13975994 13976000 MAZ TRANSFAC yes 70811034
chr19 13975998 13976005 SP1 TRANSFAC yes 70811035
chr19 13975998 13976008 SP1 JASPAR yes 70811036
chr19 13975999 13976009 SP1 TRANSFAC yes 70811037
chr19 13976000 13976005 SP1 TRANSFAC yes 70811038
chr19 13976021 13976035 CREB3 JASPAR yes 70811039
chr19 13976022 13976026 LFA1 TRANSFAC yes 70811040
chr19 13976025 13976037 CREB1 JASPAR yes 70811041
chr19 13976026 13976031 ATF1 TRANSFAC yes 70811042
chr19 13976043 13976048 SP1 TRANSFAC yes 70811043
chr19 13976044 13976049 SP1 TRANSFAC yes 70811044
chr19 13976047 13976052 SP1 TRANSFAC yes 70811045
chr19 13976048 13976053 SP1 TRANSFAC yes 70811046
chr19 13976051 13976056 SP1 TRANSFAC yes 70811047
SNP sites on vista28723[chr19:13975574-13976059]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 13975749 rs369111871 A G no 5452261
chr19 13975775 rs372963735 C T
NRF1
5452262
chr19 13975973 rs535590288 G A
SP1
5452263
chr19 13975974 rs556926904 C A
SP1
5452264
Genes possibly regulated by vista28723[chr19:13975574-13976059]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 13884982 13889276 + C19orf53 ENSG00000104979.4 13884982 0.58 0.99 17120 9408
chr19 13890884 13900972 - AC008686.1 ENSG00000214109.3 13900972 1.0 1.0 17121 25398
chr19 13906274 13943044 + ZSWIM4 ENSG00000132003.5 13906274 0.69 1.0 17122 30700
chr19 13972877 13991571 + NANOS3 ENSG00000187556.6 13972877 0.81 1.0 17123 97303
chr19 13993161 14017265 - C19orf57 ENSG00000132016.7 14017265 0.81 1.0 17124 58794
chr19 14017014 14041692 + CC2D1A ENSG00000132024.13 14017014 0.56 1.0 17125 59045
chr19 14042000 14064204 - PODNL1 ENSG00000132000.7 14064204 0.89 0.99 17126 11855
chr19 14063304 14072254 + DCAF15 ENSG00000132017.6 14063304 0.67 1.0 17127 12755
Expression level of Genes
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miRNAs possibly regulated by vista28723[chr19:13975574-13976059]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results