EnhancerDB
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  3. vista28724[chr19:13976745-13977653]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28724[chr19:13976745-13977653]
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Tissue distribution of vista28724
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Transcription factor that possibly regulate vista28724[chr19:13976745-13977653]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 13976810 13976815 SP1 TRANSFAC yes 70811048
chr19 13976810 13976816 SP1 TRANSFAC yes 70811049
chr19 13976814 13976819 SP1 TRANSFAC yes 70811050
chr19 13976831 13976843 TFAP2A JASPAR yes 70811051
chr19 13976831 13976843 TFAP2B JASPAR yes 70811052
chr19 13976831 13976843 TFAP2C JASPAR yes 70811053
chr19 13976831 13976846 TFAP2A JASPAR yes 70811054
chr19 13976832 13976843 TFAP2A JASPAR yes 70811055
chr19 13976833 13976842 TFAP2A JASPAR yes 70811056
chr19 13976838 13976850 INSM1 JASPAR yes 70811057
chr19 13976864 13976874 ELK1 JASPAR yes 70811058
chr19 13976866 13976875 ELK4 JASPAR yes 70811059
chr19 13976866 13976876 ELK1 JASPAR yes 70811060
chr19 13976866 13976876 ERG JASPAR yes 70811061
chr19 13976866 13976876 ETV5 JASPAR yes 70811062
chr19 13976866 13976876 FEV JASPAR yes 70811063
chr19 13976866 13976876 FLI1 JASPAR yes 70811064
chr19 13976866 13976877 ELK4 JASPAR yes 70811065
chr19 13976868 13976874 ETS1 JASPAR yes 70811066
chr19 13976868 13976874 SPI1 JASPAR yes 70811067
chr19 13976875 13976886 E2F1 JASPAR yes 70811068
chr19 13976893 13976898 SP1 TRANSFAC yes 70811069
chr19 13976893 13976899 SP1 TRANSFAC yes 70811070
chr19 13976896 13976902 SP1 TRANSFAC yes 70811071
chr19 13976905 13976913 MEIS2 JASPAR yes 70811072
chr19 13976905 13976913 MEIS3 JASPAR yes 70811073
chr19 13976906 13976910 NFE TRANSFAC yes 70811074
chr19 13976910 13976914 YY1 TRANSFAC yes 70811075
chr19 13976919 13976931 NHLH1 JASPAR yes 70811076
chr19 13976919 13976935 SOX4 JASPAR yes 70811077
chr19 13976920 13976930 NHLH1 JASPAR yes 70811078
chr19 13976933 13976937 YY1 TRANSFAC yes 70811079
chr19 13976941 13976946 SP1 TRANSFAC yes 70811080
chr19 13976941 13976955 RXRG JASPAR yes 70811081
chr19 13976966 13976971 SP1 TRANSFAC yes 70811082
chr19 13976978 13976996 SRF JASPAR yes 70811083
chr19 13976980 13976991 CDX2 JASPAR yes 70811084
chr19 13976981 13976992 HOXA10 JASPAR yes 70811085
chr19 13976981 13976992 HOXD12 JASPAR yes 70811086
chr19 13976981 13976993 SRF JASPAR yes 70811087
chr19 13976982 13976991 CDX1 JASPAR yes 70811088
chr19 13976982 13976992 HOXA13 JASPAR yes 70811089
chr19 13976982 13976992 HOXB13 JASPAR yes 70811090
chr19 13976982 13976992 HOXD13 JASPAR yes 70811091
chr19 13976987 13977001 STAT1 JASPAR yes 70811092
chr19 13976987 13977002 PRDM1 JASPAR yes 70811093
chr19 13976994 13977006 YY1 JASPAR yes 70811094
chr19 13977061 13977074 TFAP2A JASPAR yes 70811095
chr19 13977061 13977074 TFAP2B JASPAR yes 70811096
chr19 13977061 13977074 TFAP2C JASPAR yes 70811097
chr19 13977061 13977076 TFAP2C JASPAR yes 70811098
chr19 13977062 13977073 EBF1 JASPAR yes 70811099
chr19 13977062 13977075 TFAP2A JASPAR yes 70811100
chr19 13977062 13977075 TFAP2B JASPAR yes 70811101
chr19 13977062 13977075 TFAP2C JASPAR yes 70811102
chr19 13977069 13977090 ZNF263 JASPAR yes 70811103
chr19 13977070 13977074 LFA1 TRANSFAC yes 70811104
chr19 13977074 13977086 INSM1 JASPAR yes 70811105
chr19 13977074 13977094 RREB1 JASPAR yes 70811106
chr19 13977075 13977095 RREB1 JASPAR yes 70811107
chr19 13977079 13977089 SP1 JASPAR yes 70811108
chr19 13977079 13977100 ZNF263 JASPAR yes 70811109
chr19 13977082 13977087 SP1 TRANSFAC yes 70811110
chr19 13977082 13977092 ZNF740 JASPAR yes 70811111
chr19 13977083 13977093 SP1 JASPAR yes 70811112
chr19 13977083 13977093 ZNF740 JASPAR yes 70811113
chr19 13977085 13977095 ZNF740 JASPAR yes 70811114
chr19 13977092 13977099 NFATC2 JASPAR yes 70811115
chr19 13977098 13977116 NFYA JASPAR yes 70811116
chr19 13977101 13977117 NFYA JASPAR yes 70811117
chr19 13977104 13977119 NFYB JASPAR yes 70811118
chr19 13977130 13977140 ZNF740 JASPAR yes 70811119
chr19 13977130 13977144 GLIS2 JASPAR yes 70811120
chr19 13977130 13977144 GLIS3 JASPAR yes 70811121
chr19 13977130 13977144 ZIC1 JASPAR yes 70811122
chr19 13977130 13977145 ZIC3 JASPAR yes 70811123
chr19 13977130 13977145 ZIC4 JASPAR yes 70811124
chr19 13977132 13977146 PLAG1 JASPAR yes 70811125
chr19 13977140 13977144 H4TF2 TRANSFAC yes 70811126
chr19 13977156 13977177 ZNF263 JASPAR yes 70811127
chr19 13977157 13977163 SP1 TRANSFAC yes 70811128
chr19 13977157 13977167 SP1 JASPAR yes 70811129
chr19 13977158 13977168 SP1 JASPAR yes 70811130
chr19 13977158 13977179 ZNF263 JASPAR yes 70811131
chr19 13977159 13977180 ZNF263 JASPAR yes 70811132
chr19 13977160 13977170 ZNF740 JASPAR yes 70811133
chr19 13977160 13977181 ZNF263 JASPAR yes 70811134
chr19 13977174 13977195 ZNF263 JASPAR yes 70811135
chr19 13977181 13977192 FOXH1 JASPAR yes 70811136
chr19 13977213 13977217 YY1 TRANSFAC yes 70811137
chr19 13977252 13977263 NFKB1 JASPAR yes 70811138
chr19 13977254 13977266 ZBTB7B JASPAR yes 70811139
chr19 13977254 13977266 ZBTB7C JASPAR yes 70811140
chr19 13977317 13977332 MAFK JASPAR yes 70811141
chr19 13977340 13977346 MZF1 JASPAR yes 70811142
chr19 13977344 13977359 SOX21 JASPAR yes 70811143
chr19 13977349 13977352 MYB TRANSFAC yes 70811144
chr19 13977354 13977368 CREB3L1 JASPAR yes 70811145
chr19 13977355 13977365 MAX JASPAR yes 70811146
chr19 13977355 13977367 HES5 JASPAR yes 70811147
chr19 13977356 13977366 CLOCK JASPAR yes 70811148
chr19 13977356 13977366 HEY1 JASPAR yes 70811149
chr19 13977356 13977366 HEY2 JASPAR yes 70811150
chr19 13977356 13977366 MAX JASPAR yes 70811151
chr19 13977357 13977364 USF1 JASPAR yes 70811152
chr19 13977358 13977363 MYC TRANSFAC yes 70811153
chr19 13977358 13977363 USF1 TRANSFAC yes 70811154
chr19 13977358 13977363 USF2 TRANSFAC yes 70811155
chr19 13977358 13977376 TP63 JASPAR yes 70811156
chr19 13977358 13977376 TP73 JASPAR yes 70811157
chr19 13977362 13977372 SMAD3 JASPAR yes 70811158
chr19 13977365 13977379 XBP1 JASPAR yes 70811159
chr19 13977366 13977380 CREB3 JASPAR yes 70811160
chr19 13977366 13977380 CREB3L1 JASPAR yes 70811161
chr19 13977370 13977382 CREB1 JASPAR yes 70811162
chr19 13977371 13977376 ATF1 TRANSFAC yes 70811163
chr19 13977400 13977405 GATA2 JASPAR yes 70811164
chr19 13977411 13977416 MYB TRANSFAC yes 70811165
chr19 13977416 13977429 SMAD2 JASPAR yes 70811166
chr19 13977419 13977427 MEIS2 JASPAR yes 70811167
chr19 13977419 13977427 MEIS3 JASPAR yes 70811168
chr19 13977420 13977424 NFE TRANSFAC yes 70811169
chr19 13977429 13977435 HiNF-A TRANSFAC yes 70811170
chr19 13977481 13977484 MYB TRANSFAC yes 70811171
chr19 13977569 13977584 AR JASPAR yes 70811172
chr19 13977625 13977635 MAX JASPAR yes 70811173
chr19 13977641 13977652 ESRRA JASPAR yes 70811174
SNP sites on vista28724[chr19:13976745-13977653]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 13976843 rs548760148 T C
INSM1 TFAP2A TFAP2B TFAP2C
5452269
chr19 13976848 rs563769725 G A
INSM1
5452270
chr19 13976864 rs184791367 A G
ELK1
5452271
chr19 13976951 rs11880167 G A
RXRG
5452272
chr19 13977086 rs139452365 G GA
INSM1 RREB1 SP1 ZNF263 ZNF740
5452273
chr19 13977308 rs142216419 G A no 5452274
chr19 13977332 rs572783554 CACAT C
MAFK
5452275
chr19 13977373 rs115336165 C A,T
ATF1 CREB1 CREB3 CREB3L1 TP63 TP73 XBP1
5452276
Genes possibly regulated by vista28724[chr19:13976745-13977653]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 13884982 13889276 + C19orf53 ENSG00000104979.4 13884982 0.58 0.99 17120 8237
chr19 13890884 13900972 - AC008686.1 ENSG00000214109.3 13900972 1.0 1.0 17121 24227
chr19 13906274 13943044 + ZSWIM4 ENSG00000132003.5 13906274 0.69 1.0 17122 29529
chr19 13972877 13991571 + NANOS3 ENSG00000187556.6 13972877 0.81 1.0 17123 96132
chr19 13993161 14017265 - C19orf57 ENSG00000132016.7 14017265 0.81 1.0 17124 60388
chr19 14017014 14041692 + CC2D1A ENSG00000132024.13 14017014 0.56 1.0 17125 60639
chr19 14042000 14064204 - PODNL1 ENSG00000132000.7 14064204 0.89 0.99 17126 13449
chr19 14063304 14072254 + DCAF15 ENSG00000132017.6 14063304 0.67 1.0 17127 14349
Expression level of Genes
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miRNAs possibly regulated by vista28724[chr19:13976745-13977653]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results