EnhancerDB
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  3. vista28732[chr19:14126359-14126500]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28732[chr19:14126359-14126500]
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Tissue distribution of vista28732
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Transcription factor that possibly regulate vista28732[chr19:14126359-14126500]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 14126265 14126575 POU2F2 UCSC Txn Factor no Conserved 108391045
chr19 14126294 14126570 RUNX3 UCSC Txn Factor no Conserved 108391048
chr19 14126369 14126376 SPIB JASPAR yes 70811548
chr19 14126369 14126376 SPIB JASPAR yes 112546566
chr19 14126382 14126386 H4TF2 TRANSFAC yes 70811549
chr19 14126382 14126386 H4TF2 TRANSFAC yes 112546567
chr19 14126389 14126395 HiNF-A TRANSFAC yes 70811550
chr19 14126389 14126395 HiNF-A TRANSFAC yes 112546568
chr19 14126389 14126399 MAX JASPAR yes 70811551
chr19 14126389 14126399 MAX JASPAR yes 112546569
chr19 14126390 14126410 ESR1 JASPAR yes 70811552
chr19 14126390 14126410 ESR1 JASPAR yes 112546570
chr19 14126396 14126411 HNF4A JASPAR yes 70811553
chr19 14126396 14126411 HNF4A JASPAR yes 112546571
chr19 14126397 14126411 NR2F1 JASPAR yes 70811554
chr19 14126397 14126411 NR2F1 JASPAR yes 112546572
chr19 14126397 14126412 HNF4G JASPAR yes 70811555
chr19 14126397 14126412 HNF4G JASPAR yes 112546573
chr19 14126412 14126427 RUNX2 JASPAR yes 70811556
chr19 14126412 14126427 RUNX2 JASPAR yes 112546574
chr19 14126416 14126431 RFX5 JASPAR yes 70811557
chr19 14126416 14126431 RFX5 JASPAR yes 112546575
chr19 14126421 14126425 ESR1 TRANSFAC yes 70811558
chr19 14126421 14126425 ESR1 TRANSFAC yes 112546576
chr19 14126425 14126439 IRF7 JASPAR yes 70811559
chr19 14126425 14126439 IRF7 JASPAR yes 112546577
chr19 14126428 14126440 POU2F1 JASPAR yes 70811560
chr19 14126428 14126440 POU2F1 JASPAR yes 112546578
chr19 14126428 14126441 POU3F3 JASPAR yes 70811561
chr19 14126428 14126441 POU3F3 JASPAR yes 112546579
chr19 14126428 14126442 POU1F1 JASPAR yes 70811562
chr19 14126428 14126442 POU1F1 JASPAR yes 112546580
chr19 14126429 14126441 POU3F1 JASPAR yes 70811563
chr19 14126429 14126441 POU3F2 JASPAR yes 70811564
chr19 14126429 14126441 POU3F1 JASPAR yes 112546581
chr19 14126429 14126441 POU3F2 JASPAR yes 112546582
chr19 14126429 14126442 POU2F2 JASPAR yes 70811565
chr19 14126429 14126442 POU2F2 JASPAR yes 112546583
chr19 14126430 14126439 POU3F4 JASPAR yes 70811566
chr19 14126430 14126439 POU5F1B JASPAR yes 70811567
chr19 14126430 14126439 POU3F4 JASPAR yes 112546584
chr19 14126430 14126439 POU5F1B JASPAR yes 112546585
chr19 14126431 14126438 POU2F1 TRANSFAC yes 70811568
chr19 14126431 14126438 POU2F2 TRANSFAC yes 70811569
chr19 14126431 14126438 POU2F1 TRANSFAC yes 112546586
chr19 14126431 14126438 POU2F2 TRANSFAC yes 112546587
chr19 14126458 14126462 YY1 TRANSFAC yes 70811570
chr19 14126458 14126462 YY1 TRANSFAC yes 112546588
chr19 14126462 14126474 PKNOX1 JASPAR yes 70811571
chr19 14126462 14126474 PKNOX2 JASPAR yes 70811572
chr19 14126462 14126474 TGIF1 JASPAR yes 70811573
chr19 14126462 14126474 TGIF2 JASPAR yes 70811574
chr19 14126462 14126474 PKNOX1 JASPAR yes 112546589
chr19 14126462 14126474 PKNOX2 JASPAR yes 112546590
chr19 14126462 14126474 TGIF1 JASPAR yes 112546591
chr19 14126462 14126474 TGIF2 JASPAR yes 112546592
chr19 14126474 14126484 NFIA JASPAR yes 70811575
chr19 14126474 14126484 NFIA JASPAR yes 112546593
chr19 14126475 14126484 NFIX JASPAR yes 70811576
chr19 14126475 14126484 NFIX JASPAR yes 112546594
chr19 14126476 14126482 NFIC JASPAR yes 70811577
chr19 14126476 14126482 NFIC JASPAR yes 112546595
chr19 14126476 14126490 TLX1 JASPAR yes 70811578
chr19 14126476 14126490 TLX1 JASPAR yes 112546596
chr19 14126477 14126491 TLX1 JASPAR yes 70811579
chr19 14126477 14126491 TLX1 JASPAR yes 112546597
chr19 14126482 14126497 HNF4G JASPAR yes 70811580
chr19 14126482 14126497 HNF4G JASPAR yes 112546598
chr19 14126483 14126498 HNF4A JASPAR yes 70811581
chr19 14126483 14126498 HNF4A JASPAR yes 112546599
chr19 14126498 14126501 MYB TRANSFAC yes 70811582
chr19 14126498 14126501 MYB TRANSFAC yes 112546600
SNP sites on vista28732[chr19:14126359-14126500]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 14126475 rs553798591 T C
NFIA NFIX POU2F2 RUNX3
5453226
Genes possibly regulated by vista28732[chr19:14126359-14126500]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 14042000 14064204 - PODNL1 ENSG00000132000.7 14064204 0.89 0.99 17126 37845
chr19 14063304 14072254 + DCAF15 ENSG00000132017.6 14063304 0.67 1.0 17127 36945
chr19 14072350 14117851 - RFX1 ENSG00000132005.4 14117851 0.68 1.0 17128 91492
chr19 14138960 14141854 + RLN3 ENSG00000171136.6 14138960 0.93 0.99 17129 87540
chr19 14142560 14163743 + IL27RA ENSG00000104998.2 14142560 0.8 1.0 17130 83940
chr19 14164177 14169971 - PALM3 ENSG00000187867.4 14169971 0.86 0.99 17131 56529
chr19 14183348 14185874 + hsa-mir-1199 ENSG00000141854.3 14183348 0.81 1.0 17132 43152
chr19 14192431 14196687 - C19orf67 ENSG00000188032.5 14196687 0.8 0.94 17133 29813
chr19 14198652 14201848 - SAMD1 ENSG00000141858.7 14201848 0.76 0.99 17134 24652
Expression level of Genes
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miRNAs possibly regulated by vista28732[chr19:14126359-14126500]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results