EnhancerDB
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  3. vista28747[chr19:14467223-14467368]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28747[chr19:14467223-14467368]
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Tissue distribution of vista28747
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Transcription factor that possibly regulate vista28747[chr19:14467223-14467368]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 14467214 14467384 CEBPB UCSC Txn Factor no Conserved 108391243
chr19 14467213 14467233 RREB1 JASPAR yes 70812233
chr19 14467213 14467233 RREB1 JASPAR yes 112564979
chr19 14467217 14467237 RREB1 JASPAR yes 70812234
chr19 14467217 14467237 RREB1 JASPAR yes 112564980
chr19 14467222 14467232 SP1 JASPAR yes 70812235
chr19 14467222 14467232 SP1 JASPAR yes 112564981
chr19 14467234 14467238 ESR1 TRANSFAC yes 70812236
chr19 14467234 14467238 ESR1 TRANSFAC yes 112564982
chr19 14467236 14467248 PKNOX2 JASPAR yes 70812237
chr19 14467236 14467248 PKNOX2 JASPAR yes 112564983
chr19 14467236 14467249 ZBTB18 JASPAR yes 70812238
chr19 14467236 14467249 ZBTB18 JASPAR yes 112564984
chr19 14467237 14467247 NHLH1 JASPAR yes 70812239
chr19 14467237 14467247 NHLH1 JASPAR yes 112564985
chr19 14467279 14467294 ESR2 JASPAR yes 70812240
chr19 14467279 14467294 ESR2 JASPAR yes 112564986
chr19 14467295 14467306 CEBPA JASPAR yes 70812241
chr19 14467295 14467306 CEBPA JASPAR yes 112564987
chr19 14467296 14467307 CEBPB JASPAR yes 70812242
chr19 14467296 14467307 CEBPB JASPAR yes 112564988
chr19 14467299 14467303 LFA1 TRANSFAC yes 70812243
chr19 14467299 14467303 LFA1 TRANSFAC yes 112564989
chr19 14467303 14467314 SPDEF JASPAR yes 70812244
chr19 14467303 14467314 SPDEF JASPAR yes 112564990
chr19 14467313 14467318 TFAP2A TRANSFAC yes 70812245
chr19 14467313 14467318 TFAP2A TRANSFAC yes 112564991
chr19 14467313 14467319 MZF1 JASPAR yes 70812246
chr19 14467313 14467319 MZF1 JASPAR yes 112564992
chr19 14467315 14467320 ETS2 TRANSFAC yes 70812247
chr19 14467315 14467320 ETS2 TRANSFAC yes 112564993
chr19 14467331 14467349 IRF2 JASPAR yes 70812248
chr19 14467331 14467349 IRF2 JASPAR yes 112564994
chr19 14467336 14467348 IRF1 JASPAR yes 70812249
chr19 14467336 14467348 IRF1 JASPAR yes 112564995
chr19 14467354 14467363 THAP1 JASPAR yes 70812250
chr19 14467354 14467363 THAP1 JASPAR yes 112564996
chr19 14467360 14467370 RORA JASPAR yes 70812251
chr19 14467360 14467370 RORA JASPAR yes 112564997
SNP sites on vista28747[chr19:14467223-14467368]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 14467231 rs150131572 G T
CEBPB RREB1 SP1
5455581
chr19 14467313 rs4926113 T C
CEBPB MZF1 SPDEF TFAP2A
5455582
Genes possibly regulated by vista28747[chr19:14467223-14467368]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 14491313 14519537 + CD97 ENSG00000123146.15 14491313 0.81 1.0 17138 76055
chr19 14519631 14530192 - DDX39A ENSG00000123136.10 14530192 0.86 1.0 17139 37176
chr19 14543865 14582679 + PKN1 ENSG00000123143.8 14543865 0.65 1.0 17140 23503
Expression level of Genes
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miRNAs possibly regulated by vista28747[chr19:14467223-14467368]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results