EnhancerDB
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  3. vista28759[chr19:14576577-14576952]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28759[chr19:14576577-14576952]
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Tissue distribution of vista28759
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Transcription factor that possibly regulate vista28759[chr19:14576577-14576952]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 14576594 14576598 YY1 TRANSFAC yes 70813270
chr19 14576596 14576606 NFIA JASPAR yes 70813271
chr19 14576598 14576604 NFIC JASPAR yes 70813272
chr19 14576600 14576619 REST JASPAR yes 70813273
chr19 14576631 14576637 ZNF354C JASPAR yes 70813274
chr19 14576633 14576646 POU2F2 JASPAR yes 70813275
chr19 14576639 14576650 NFIL3 JASPAR yes 70813276
chr19 14576642 14576657 SCRT1 JASPAR yes 70813277
chr19 14576644 14576647 MYB TRANSFAC yes 70813278
chr19 14576646 14576652 PTF TRANSFAC yes 70813279
chr19 14576651 14576658 SPIB JASPAR yes 70813280
chr19 14576676 14576680 YY1 TRANSFAC yes 70813281
chr19 14576677 14576692 FOXA1 JASPAR yes 70813282
chr19 14576678 14576690 FOXI1 JASPAR yes 70813283
chr19 14576678 14576692 POU4F1 JASPAR yes 70813284
chr19 14576678 14576693 FOXP1 JASPAR yes 70813285
chr19 14576678 14576693 HNF1A JASPAR yes 70813286
chr19 14576679 14576691 FOXC2 JASPAR yes 70813287
chr19 14576679 14576693 ONECUT2 JASPAR yes 70813288
chr19 14576679 14576693 ONECUT3 JASPAR yes 70813289
chr19 14576680 14576691 FOXB1 JASPAR yes 70813290
chr19 14576680 14576691 FOXC1 JASPAR yes 70813291
chr19 14576680 14576691 PROP1 JASPAR yes 70813292
chr19 14576680 14576696 POU4F2 JASPAR yes 70813293
chr19 14576680 14576696 POU4F3 JASPAR yes 70813294
chr19 14576681 14576685 YY1 TRANSFAC yes 70813295
chr19 14576681 14576696 FOXA1 JASPAR yes 70813296
chr19 14576682 14576694 FOXI1 JASPAR yes 70813297
chr19 14576682 14576696 POU4F1 JASPAR yes 70813298
chr19 14576682 14576697 FOXP1 JASPAR yes 70813299
chr19 14576682 14576697 HNF1A JASPAR yes 70813300
chr19 14576683 14576695 FOXC2 JASPAR yes 70813301
chr19 14576683 14576697 ONECUT2 JASPAR yes 70813302
chr19 14576683 14576697 ONECUT3 JASPAR yes 70813303
chr19 14576684 14576695 FOXB1 JASPAR yes 70813304
chr19 14576684 14576695 FOXC1 JASPAR yes 70813305
chr19 14576684 14576695 PROP1 JASPAR yes 70813306
chr19 14576685 14576689 YY1 TRANSFAC yes 70813307
chr19 14576685 14576700 FOXA1 JASPAR yes 70813308
chr19 14576686 14576698 FOXI1 JASPAR yes 70813309
chr19 14576686 14576701 FOXP1 JASPAR yes 70813310
chr19 14576687 14576699 FOXC2 JASPAR yes 70813311
chr19 14576687 14576701 FOXF2 JASPAR yes 70813312
chr19 14576687 14576701 ONECUT3 JASPAR yes 70813313
chr19 14576688 14576699 FOXB1 JASPAR yes 70813314
chr19 14576688 14576699 FOXC1 JASPAR yes 70813315
chr19 14576689 14576693 YY1 TRANSFAC yes 70813316
chr19 14576689 14576700 FOXA1 JASPAR yes 70813317
chr19 14576689 14576704 MEF2A JASPAR yes 70813318
chr19 14576690 14576705 MEF2C JASPAR yes 70813319
chr19 14576691 14576703 MEF2A JASPAR yes 70813320
chr19 14576691 14576703 MEF2D JASPAR yes 70813321
chr19 14576693 14576697 YY1 TRANSFAC yes 70813322
chr19 14576707 14576726 PAX5 JASPAR yes 70813323
chr19 14576715 14576719 NFE TRANSFAC yes 70813324
chr19 14576732 14576744 TEAD1 JASPAR yes 70813325
chr19 14576734 14576744 TEAD1 JASPAR yes 70813326
chr19 14576734 14576744 TEAD4 JASPAR yes 70813327
chr19 14576735 14576743 TEAD3 JASPAR yes 70813328
chr19 14576744 14576754 SREBF1 JASPAR yes 70813329
chr19 14576744 14576754 SREBF2 JASPAR yes 70813330
chr19 14576754 14576764 SREBF1 JASPAR yes 70813331
chr19 14576765 14576769 H1TF2 TRANSFAC yes 70813332
chr19 14576765 14576769 NFE TRANSFAC yes 70813333
chr19 14576765 14576769 SRF TRANSFAC yes 70813334
chr19 14576770 14576778 SP1 TRANSFAC yes 70813335
chr19 14576780 14576794 TCF7L2 JASPAR yes 70813336
chr19 14576784 14576790 TCF1 TRANSFAC yes 70813337
chr19 14576828 14576840 HES5 JASPAR yes 70813338
chr19 14576828 14576840 HES7 JASPAR yes 70813339
chr19 14576828 14576840 PKNOX2 JASPAR yes 70813340
chr19 14576828 14576848 TP63 JASPAR yes 70813341
chr19 14576829 14576847 TP53 JASPAR yes 70813342
chr19 14576829 14576847 TP63 JASPAR yes 70813343
chr19 14576829 14576847 TP73 JASPAR yes 70813344
chr19 14576830 14576845 TP53 JASPAR yes 70813345
chr19 14576836 14576842 YY1 JASPAR yes 70813346
chr19 14576842 14576851 HIC2 JASPAR yes 70813347
chr19 14576854 14576868 IRF7 JASPAR yes 70813348
chr19 14576873 14576886 NFKB1 JASPAR yes 70813349
chr19 14576873 14576886 NFKB2 JASPAR yes 70813350
chr19 14576876 14576887 CEBPB JASPAR yes 70813351
chr19 14576879 14576891 YY1 JASPAR yes 70813352
chr19 14576901 14576919 RARA JASPAR yes 70813353
chr19 14576908 14576921 NR2F1 JASPAR yes 70813354
chr19 14576912 14576920 CREB1 JASPAR yes 70813355
chr19 14576916 14576925 NKX2-8 JASPAR yes 70813356
chr19 14576916 14576926 NKX2-3 JASPAR yes 70813357
chr19 14576923 14576944 ZNF263 JASPAR yes 70813358
SNP sites on vista28759[chr19:14576577-14576952]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 14576628 rs12459596 C T no 5456531
chr19 14576644 rs141336682 G A
MYB NFIL3 POU2F2 SCRT1
5456532
chr19 14576679 rs569391069 TTTTA T
FOXA1 FOXC2 FOXI1 FOXP1 HNF1A ONECUT2 ONECUT3 POU4F1 YY1
5456533
chr19 14576683 rs11670897 A T
FOXA1 FOXB1 FOXC1 FOXC2 FOXI1 FOXP1 HNF1A ONECUT2 ONECUT3 POU4F1 POU4F2 POU4F3 PROP1 YY1
5456534
chr19 14576897 rs369861965 G T no 5456535
chr19 14576947 rs77746841 A C no 5456536
Genes possibly regulated by vista28759[chr19:14576577-14576952]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 14491313 14519537 + CD97 ENSG00000123146.15 14491313 0.81 1.0 17138 14736
chr19 14519631 14530192 - DDX39A ENSG00000123136.10 14530192 0.86 1.0 17139 53615
chr19 14543865 14582679 + PKN1 ENSG00000123143.8 14543865 0.65 1.0 17140 67288
chr19 14583278 14586174 - PTGER1 ENSG00000160951.3 14586174 0.93 1.0 17141 90778
chr19 14588572 14606944 - GIPC1 ENSG00000123159.11 14606944 0.73 1.0 17142 70008
chr19 14625582 14640582 - DNAJB1 ENSG00000132002.3 14640582 0.72 1.0 17143 36370
chr19 14627897 14676792 + TECR ENSG00000099797.7 14627897 0.61 1.0 17144 49055
Expression level of Genes
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miRNAs possibly regulated by vista28759[chr19:14576577-14576952]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results