EnhancerDB
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  3. vista28762[chr19:14617819-14618098]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28762[chr19:14617819-14618098]
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Tissue distribution of vista28762
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Transcription factor that possibly regulate vista28762[chr19:14617819-14618098]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 14617821 14617831 SREBF1 JASPAR yes 70813435
chr19 14617821 14617831 SREBF1 JASPAR yes 112574083
chr19 14617852 14617871 PAX5 JASPAR yes 70813436
chr19 14617852 14617871 PAX5 JASPAR yes 112574084
chr19 14617872 14617876 NFE TRANSFAC yes 70813437
chr19 14617872 14617876 NFE TRANSFAC yes 112574085
chr19 14617876 14617896 RREB1 JASPAR yes 70813438
chr19 14617876 14617896 RREB1 JASPAR yes 112574086
chr19 14617878 14617898 RREB1 JASPAR yes 70813439
chr19 14617878 14617898 RREB1 JASPAR yes 112574087
chr19 14617879 14617899 RREB1 JASPAR yes 70813440
chr19 14617879 14617899 RREB1 JASPAR yes 112574088
chr19 14617881 14617901 RREB1 JASPAR yes 70813441
chr19 14617881 14617901 RREB1 JASPAR yes 112574089
chr19 14617882 14617894 ZBTB7C JASPAR yes 70813442
chr19 14617882 14617894 ZBTB7C JASPAR yes 112574090
chr19 14617882 14617902 RREB1 JASPAR yes 70813443
chr19 14617882 14617902 RREB1 JASPAR yes 112574091
chr19 14617885 14617897 ZBTB7C JASPAR yes 70813444
chr19 14617885 14617897 ZBTB7C JASPAR yes 112574092
chr19 14617888 14617908 RREB1 JASPAR yes 70813445
chr19 14617888 14617908 RREB1 JASPAR yes 112574093
chr19 14617942 14617963 IRF1 JASPAR yes 70813446
chr19 14617942 14617963 IRF1 JASPAR yes 112574094
chr19 14617944 14617959 IRF9 JASPAR yes 70813447
chr19 14617944 14617959 IRF9 JASPAR yes 112574095
chr19 14617946 14617960 STAT1 JASPAR yes 70813448
chr19 14617946 14617960 STAT1 JASPAR yes 112574096
chr19 14617946 14617961 STAT2 JASPAR yes 70813449
chr19 14617946 14617961 STAT2 JASPAR yes 112574097
chr19 14617947 14617957 ELK1 JASPAR yes 70813450
chr19 14617947 14617957 ELK1 JASPAR yes 112574098
chr19 14617948 14617959 ETV2 JASPAR yes 70813451
chr19 14617948 14617959 ETV2 JASPAR yes 112574099
chr19 14617951 14617957 ETS1 JASPAR yes 70813452
chr19 14617951 14617957 ETS1 JASPAR yes 112574100
chr19 14617952 14617962 RELA JASPAR yes 70813453
chr19 14617952 14617962 RELA JASPAR yes 112574101
chr19 14617955 14617968 SCRT2 JASPAR yes 70813454
chr19 14617955 14617968 SCRT2 JASPAR yes 112574102
chr19 14617955 14617970 SCRT1 JASPAR yes 70813455
chr19 14617955 14617970 SCRT1 JASPAR yes 112574103
chr19 14617959 14617968 SNAI2 JASPAR yes 70813456
chr19 14617959 14617968 SNAI2 JASPAR yes 112574104
chr19 14617959 14617969 FIGLA JASPAR yes 70813457
chr19 14617959 14617969 ID4 JASPAR yes 70813458
chr19 14617959 14617969 TCF3 JASPAR yes 70813459
chr19 14617959 14617969 TCF4 JASPAR yes 70813460
chr19 14617959 14617969 FIGLA JASPAR yes 112574105
chr19 14617959 14617969 ID4 JASPAR yes 112574106
chr19 14617959 14617969 TCF3 JASPAR yes 112574107
chr19 14617959 14617969 TCF4 JASPAR yes 112574108
chr19 14617961 14617970 ZEB1 JASPAR yes 70813461
chr19 14617961 14617970 ZEB1 JASPAR yes 112574109
chr19 14617962 14617970 TBX5 JASPAR yes 70813462
chr19 14617962 14617970 TBX5 JASPAR yes 112574110
chr19 14617963 14617982 RFX2 JASPAR yes 70813463
chr19 14617963 14617982 RFX2 JASPAR yes 112574111
chr19 14617968 14617987 RFX2 JASPAR yes 70813464
chr19 14617968 14617987 RFX2 JASPAR yes 112574112
chr19 14618002 14618013 E2F6 JASPAR yes 70813465
chr19 14618002 14618013 E2F6 JASPAR yes 112574113
chr19 14618016 14618030 TLX1 JASPAR yes 70813466
chr19 14618016 14618030 TLX1 JASPAR yes 112574114
chr19 14618017 14618027 NEUROG2 JASPAR yes 70813467
chr19 14618017 14618027 NEUROG2 JASPAR yes 112574115
chr19 14618017 14618029 TAL1 JASPAR yes 70813468
chr19 14618017 14618029 TAL1 JASPAR yes 112574116
chr19 14618021 14618027 YY1 JASPAR yes 70813469
chr19 14618021 14618027 YY1 JASPAR yes 112574117
SNP sites on vista28762[chr19:14617819-14618098]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 14617820 rs112878517 C T no 5456993
chr19 14617858 rs150139386 C T
PAX5
5456994
chr19 14617893 rs187608497 C A
RREB1 ZBTB7C
5456995
chr19 14617896 rs7251878 A C
RREB1 ZBTB7C
5456996
chr19 14618025 rs138558807 G A
NEUROG2 TAL1 TLX1 YY1
5456997
Genes possibly regulated by vista28762[chr19:14617819-14618098]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 14519631 14530192 - DDX39A ENSG00000123136.10 14530192 0.86 1.0 17139 12373
chr19 14543865 14582679 + PKN1 ENSG00000123143.8 14543865 0.65 1.0 17140 26046
chr19 14583278 14586174 - PTGER1 ENSG00000160951.3 14586174 0.93 1.0 17141 68355
chr19 14588572 14606944 - GIPC1 ENSG00000123159.11 14606944 0.73 1.0 17142 89125
chr19 14625582 14640582 - DNAJB1 ENSG00000132002.3 14640582 0.72 1.0 17143 77516
chr19 14627897 14676792 + TECR ENSG00000099797.7 14627897 0.61 1.0 17144 90201
chr19 14676890 14682874 - NDUFB7 ENSG00000099795.2 14682874 0.49 0.99 17145 35224
chr19 14693896 14721969 + CLEC17A ENSG00000187912.7 14693896 0.98 0.94 17146 24202
Expression level of Genes
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miRNAs possibly regulated by vista28762[chr19:14617819-14618098]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results