EnhancerDB
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  3. vista28782[chr19:15202796-15202947]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28782[chr19:15202796-15202947]
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Tissue distribution of vista28782
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Transcription factor that possibly regulate vista28782[chr19:15202796-15202947]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 15202641 15203226 CTCF UCSC Txn Factor no Conserved 108392140
chr19 15202722 15203001 RAD21 UCSC Txn Factor no Conserved 108392152
chr19 15202813 15202818 SP1 TRANSFAC yes 70814328
chr19 15202849 15202868 CTCF JASPAR yes 70814329
chr19 15202859 15202877 RARA JASPAR yes 70814330
chr19 15202872 15202876 YY1 TRANSFAC yes 70814331
chr19 15202877 15202885 HOXA5 JASPAR yes 70814332
chr19 15202880 15202891 PHOX2A JASPAR yes 70814333
chr19 15202892 15202913 IRF1 JASPAR yes 70814334
chr19 15202894 15202909 STAT2 JASPAR yes 70814335
chr19 15202894 15202915 IRF1 JASPAR yes 70814336
chr19 15202895 15202916 IRF1 JASPAR yes 70814337
chr19 15202896 15202917 IRF1 JASPAR yes 70814338
chr19 15202897 15202912 FOXP1 JASPAR yes 70814339
chr19 15202897 15202918 IRF1 JASPAR yes 70814340
chr19 15202898 15202913 FOXP1 JASPAR yes 70814341
chr19 15202898 15202919 IRF1 JASPAR yes 70814342
chr19 15202899 15202914 FOXP1 JASPAR yes 70814343
chr19 15202899 15202920 IRF1 JASPAR yes 70814344
chr19 15202900 15202915 FOXP1 JASPAR yes 70814345
chr19 15202900 15202921 IRF1 JASPAR yes 70814346
chr19 15202901 15202916 FOXP1 JASPAR yes 70814347
chr19 15202901 15202922 IRF1 JASPAR yes 70814348
chr19 15202902 15202917 FOXP1 JASPAR yes 70814349
chr19 15202903 15202918 FOXP1 JASPAR yes 70814350
chr19 15202904 15202919 FOXP1 JASPAR yes 70814351
chr19 15202904 15202925 IRF1 JASPAR yes 70814352
chr19 15202905 15202920 FOXP1 JASPAR yes 70814353
chr19 15202905 15202925 RREB1 JASPAR yes 70814354
chr19 15202905 15202926 IRF1 JASPAR yes 70814355
chr19 15202906 15202921 FOXP1 JASPAR yes 70814356
chr19 15202906 15202927 IRF1 JASPAR yes 70814357
chr19 15202907 15202922 FOXP1 JASPAR yes 70814358
chr19 15202908 15202923 FOXP1 JASPAR yes 70814359
chr19 15202910 15202930 RREB1 JASPAR yes 70814360
chr19 15202911 15202926 MEF2C JASPAR yes 70814361
chr19 15202911 15202932 IRF1 JASPAR yes 70814362
chr19 15202912 15202927 RUNX2 JASPAR yes 70814363
chr19 15202913 15202933 RREB1 JASPAR yes 70814364
chr19 15202916 15202936 RREB1 JASPAR yes 70814365
chr19 15202917 15202937 RREB1 JASPAR yes 70814366
chr19 15202919 15202934 RUNX2 JASPAR yes 70814367
chr19 15202921 15202941 RREB1 JASPAR yes 70814368
chr19 15202924 15202945 IRF1 JASPAR yes 70814369
chr19 15202928 15202943 FOXP1 JASPAR yes 70814370
chr19 15202930 15202945 FOXP1 JASPAR yes 70814371
SNP sites on vista28782[chr19:15202796-15202947]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28782[chr19:15202796-15202947]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 15060846 15133802 - SLC1A6 ENSG00000105143.8 15133802 0.93 0.97 17156 31006
chr19 15121556 15134081 + CCDC105 ENSG00000160994.3 15121556 1.0 1.0 17157 18760
chr19 15160195 15169104 + CASP14 ENSG00000105141.4 15160195 1.0 1.0 17158 57399
chr19 15197791 15199032 + OR1I1 ENSG00000094661.2 15197791 0.0 0.0 17159 94995
chr19 15218214 15225799 + SYDE1 ENSG00000105137.8 15218214 0.76 0.99 17160 84733
chr19 15225795 15236596 - ILVBL ENSG00000105135.11 15236596 0.65 1.0 17161 66351
Expression level of Genes
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miRNAs possibly regulated by vista28782[chr19:15202796-15202947]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results