EnhancerDB
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  3. vista2880[chr1:110429456-110429734]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2880[chr1:110429456-110429734]
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Tissue distribution of vista2880
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Transcription factor that possibly regulate vista2880[chr1:110429456-110429734]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 110429450 110429463 ELF1 JASPAR yes 31450082
chr1 110429450 110429463 ELF1 JASPAR yes 118348185
chr1 110429453 110429460 SPIB JASPAR yes 31450083
chr1 110429453 110429460 SPIB JASPAR yes 118348186
chr1 110429453 110429463 ETV6 JASPAR yes 31450084
chr1 110429453 110429463 GABPA JASPAR yes 31450085
chr1 110429453 110429463 ETV6 JASPAR yes 118348187
chr1 110429453 110429463 GABPA JASPAR yes 118348188
chr1 110429453 110429464 FLI1 JASPAR yes 31450086
chr1 110429453 110429464 FLI1 JASPAR yes 118348189
chr1 110429454 110429462 EHF JASPAR yes 31450087
chr1 110429454 110429462 EHF JASPAR yes 118348190
chr1 110429455 110429462 SPI1 JASPAR yes 31450088
chr1 110429455 110429462 SPI1 JASPAR yes 118348191
chr1 110429467 110429477 SP1 JASPAR yes 31450089
chr1 110429467 110429477 SP1 JASPAR yes 118348192
chr1 110429484 110429488 NFE TRANSFAC yes 31450090
chr1 110429484 110429488 NFE TRANSFAC yes 118348193
chr1 110429492 110429497 ETS2 TRANSFAC yes 31450091
chr1 110429492 110429497 ETS2 TRANSFAC yes 118348194
chr1 110429501 110429522 ZNF263 JASPAR yes 31450092
chr1 110429501 110429522 ZNF263 JASPAR yes 118348195
chr1 110429518 110429533 JUND JASPAR yes 31450093
chr1 110429518 110429533 JUND JASPAR yes 118348196
chr1 110429519 110429532 JUN JASPAR yes 31450094
chr1 110429519 110429532 JUN JASPAR yes 118348197
chr1 110429522 110429536 RORA JASPAR yes 31450095
chr1 110429522 110429536 RORA JASPAR yes 118348198
chr1 110429539 110429545 TCF1 TRANSFAC yes 31450096
chr1 110429539 110429545 TCF1 TRANSFAC yes 118348199
chr1 110429554 110429559 ATF1 TRANSFAC yes 31450097
chr1 110429554 110429559 ATF1 TRANSFAC yes 118348200
chr1 110429555 110429569 SPI1 JASPAR yes 31450098
chr1 110429555 110429569 SPIC JASPAR yes 31450099
chr1 110429555 110429569 SPI1 JASPAR yes 118348201
chr1 110429555 110429569 SPIC JASPAR yes 118348202
chr1 110429562 110429570 FOXO3 JASPAR yes 31450100
chr1 110429562 110429570 FOXO3 JASPAR yes 118348203
chr1 110429564 110429571 NFATC2 JASPAR yes 31450101
chr1 110429564 110429571 NFATC2 JASPAR yes 118348204
chr1 110429601 110429612 EBF1 JASPAR yes 31450102
chr1 110429601 110429612 EBF1 JASPAR yes 118348205
chr1 110429607 110429611 LFA1 TRANSFAC yes 31450103
chr1 110429607 110429611 LFA1 TRANSFAC yes 118348206
chr1 110429609 110429630 REST JASPAR yes 31450104
chr1 110429609 110429630 REST JASPAR yes 118348207
chr1 110429625 110429639 PAX6 JASPAR yes 31450105
chr1 110429625 110429639 PAX6 JASPAR yes 118348208
chr1 110429656 110429670 TLX1 JASPAR yes 31450106
chr1 110429656 110429670 TLX1 JASPAR yes 118348209
chr1 110429657 110429668 ELK4 JASPAR yes 31450107
chr1 110429657 110429668 FLI1 JASPAR yes 31450108
chr1 110429657 110429668 ELK4 JASPAR yes 118348210
chr1 110429657 110429668 FLI1 JASPAR yes 118348211
chr1 110429658 110429668 ELK1 JASPAR yes 31450109
chr1 110429658 110429668 ELK3 JASPAR yes 31450110
chr1 110429658 110429668 ERG JASPAR yes 31450111
chr1 110429658 110429668 ETS1 JASPAR yes 31450112
chr1 110429658 110429668 ETV1 JASPAR yes 31450113
chr1 110429658 110429668 ETV5 JASPAR yes 31450114
chr1 110429658 110429668 FLI1 JASPAR yes 31450115
chr1 110429658 110429668 GABPA JASPAR yes 31450116
chr1 110429658 110429668 ELK1 JASPAR yes 118348212
chr1 110429658 110429668 ELK3 JASPAR yes 118348213
chr1 110429658 110429668 ERG JASPAR yes 118348214
chr1 110429658 110429668 ETS1 JASPAR yes 118348215
chr1 110429658 110429668 ETV1 JASPAR yes 118348216
chr1 110429658 110429668 ETV5 JASPAR yes 118348217
chr1 110429658 110429668 FLI1 JASPAR yes 118348218
chr1 110429658 110429668 GABPA JASPAR yes 118348219
chr1 110429658 110429671 ELF1 JASPAR yes 31450117
chr1 110429658 110429671 ELF1 JASPAR yes 118348220
chr1 110429659 110429668 ELK4 JASPAR yes 31450118
chr1 110429659 110429668 ELK4 JASPAR yes 118348221
chr1 110429660 110429666 ETS1 JASPAR yes 31450119
chr1 110429660 110429666 SPI1 JASPAR yes 31450120
chr1 110429660 110429666 ETS1 JASPAR yes 118348222
chr1 110429660 110429666 SPI1 JASPAR yes 118348223
chr1 110429660 110429670 ELK1 JASPAR yes 31450121
chr1 110429660 110429670 ELK1 JASPAR yes 118348224
chr1 110429663 110429678 HNF4A JASPAR yes 31450122
chr1 110429663 110429678 HNF4A JASPAR yes 118348225
chr1 110429664 110429679 HNF4G JASPAR yes 31450123
chr1 110429664 110429679 NR2C2 JASPAR yes 31450124
chr1 110429664 110429679 HNF4G JASPAR yes 118348226
chr1 110429664 110429679 NR2C2 JASPAR yes 118348227
chr1 110429687 110429700 TFAP2A JASPAR yes 31450125
chr1 110429687 110429700 TFAP2B JASPAR yes 31450126
chr1 110429687 110429700 TFAP2C JASPAR yes 31450127
chr1 110429687 110429700 TFAP2A JASPAR yes 118348228
chr1 110429687 110429700 TFAP2B JASPAR yes 118348229
chr1 110429687 110429700 TFAP2C JASPAR yes 118348230
chr1 110429698 110429719 IRF1 JASPAR yes 31450128
chr1 110429698 110429719 IRF1 JASPAR yes 118348231
chr1 110429699 110429719 PPARG JASPAR yes 31450129
chr1 110429699 110429719 PPARG JASPAR yes 118348232
chr1 110429700 110429715 STAT2 JASPAR yes 31450130
chr1 110429700 110429715 STAT2 JASPAR yes 118348233
chr1 110429700 110429720 PPARG JASPAR yes 31450131
chr1 110429700 110429720 PPARG JASPAR yes 118348234
chr1 110429701 110429715 SPI1 JASPAR yes 31450132
chr1 110429701 110429715 STAT1 JASPAR yes 31450133
chr1 110429701 110429715 SPI1 JASPAR yes 118348235
chr1 110429701 110429715 STAT1 JASPAR yes 118348236
chr1 110429704 110429711 SPIB JASPAR yes 31450134
chr1 110429704 110429711 SPIB JASPAR yes 118348237
chr1 110429712 110429718 MZF1 JASPAR yes 31450135
chr1 110429712 110429718 MZF1 JASPAR yes 118348238
chr1 110429716 110429720 YY1 TRANSFAC yes 31450136
chr1 110429716 110429720 YY1 TRANSFAC yes 118348239
SNP sites on vista2880[chr1:110429456-110429734]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 110429506 rs142350030 G A
ZNF263
549314
chr1 110429517 rs113523868 G A
ZNF263
549315
chr1 110429525 rs116915481 G A
JUN JUND RORA
549316
Genes possibly regulated by vista2880[chr1:110429456-110429734]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 110452864 110473614 + CSF1 ENSG00000184371.9 110452864 0.71 0.98 991 76870
chr1 110527308 110566357 + AHCYL1 ENSG00000168710.13 110527308 0.71 1.0 992 2426
Expression level of Genes
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miRNAs possibly regulated by vista2880[chr1:110429456-110429734]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results