EnhancerDB
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  3. vista28806[chr19:16193841-16194249]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28806[chr19:16193841-16194249]
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Tissue distribution of vista28806
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Transcription factor that possibly regulate vista28806[chr19:16193841-16194249]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 16186070 16201238 POLR2A UCSC Txn Factor no Conserved 108392733
chr19 16186070 16201238 POLR2A UCSC Txn Factor no Conserved 108392734
chr19 16193841 16193847 PEA3 TRANSFAC yes 70815572
chr19 16193843 16193857 STAT1 JASPAR yes 70815573
chr19 16193843 16193858 STAT2 JASPAR yes 70815574
chr19 16193847 16193852 ETS2 TRANSFAC yes 70815575
chr19 16193863 16193873 FIGLA JASPAR yes 70815576
chr19 16193884 16193888 NFE TRANSFAC yes 70815577
chr19 16193909 16193917 MEIS2 JASPAR yes 70815578
chr19 16193909 16193917 MEIS3 JASPAR yes 70815579
chr19 16193914 16193929 MEF2C JASPAR yes 70815580
chr19 16193917 16193921 YY1 TRANSFAC yes 70815581
chr19 16193928 16193933 MYC TRANSFAC yes 70815582
chr19 16193972 16193982 ID4 JASPAR yes 70815583
chr19 16193972 16193982 TCF4 JASPAR yes 70815584
chr19 16193994 16193998 TEAD2 TRANSFAC yes 70815585
chr19 16193995 16194003 RHOXF1 JASPAR yes 70815586
chr19 16194012 16194026 CREB3 JASPAR yes 70815587
chr19 16194012 16194026 CREB3 JASPAR yes 112625972
chr19 16194020 16194025 SP1 TRANSFAC yes 70815588
chr19 16194020 16194025 SP1 TRANSFAC yes 112625973
chr19 16194021 16194026 SP1 TRANSFAC yes 70815589
chr19 16194021 16194026 SP1 TRANSFAC yes 112625974
chr19 16194026 16194032 ZNF354C JASPAR yes 70815590
chr19 16194026 16194032 ZNF354C JASPAR yes 112625975
chr19 16194035 16194048 NR2F1 JASPAR yes 70815591
chr19 16194035 16194048 NR2F1 JASPAR yes 112625976
chr19 16194036 16194044 CREB1 JASPAR yes 70815592
chr19 16194036 16194044 CREB1 JASPAR yes 112625977
chr19 16194039 16194043 ESR1 TRANSFAC yes 70815593
chr19 16194039 16194043 ESR1 TRANSFAC yes 112625978
chr19 16194040 16194049 SNAI2 JASPAR yes 70815594
chr19 16194040 16194049 SNAI2 JASPAR yes 112625979
chr19 16194040 16194050 SREBF2 JASPAR yes 70815595
chr19 16194040 16194050 SREBF2 JASPAR yes 112625980
chr19 16194065 16194077 YY1 JASPAR yes 70815596
chr19 16194065 16194077 YY1 JASPAR yes 112625981
chr19 16194069 16194080 CEBPB JASPAR yes 70815597
chr19 16194069 16194080 CEBPB JASPAR yes 112625982
chr19 16194070 16194083 NFKB1 JASPAR yes 70815598
chr19 16194070 16194083 NFKB2 JASPAR yes 70815599
chr19 16194070 16194083 NFKB1 JASPAR yes 112625983
chr19 16194070 16194083 NFKB2 JASPAR yes 112625984
chr19 16194086 16194096 HOXA13 JASPAR yes 70815600
chr19 16194086 16194096 HOXA13 JASPAR yes 112625985
chr19 16194086 16194101 MEF2C JASPAR yes 70815601
chr19 16194086 16194101 MEF2C JASPAR yes 112625986
chr19 16194087 16194101 POU4F1 JASPAR yes 70815602
chr19 16194087 16194101 POU4F1 JASPAR yes 112625987
chr19 16194087 16194102 MEF2A JASPAR yes 70815603
chr19 16194087 16194102 MEF2A JASPAR yes 112625988
chr19 16194088 16194100 MEF2D JASPAR yes 70815604
chr19 16194088 16194100 MEF2D JASPAR yes 112625989
chr19 16194091 16194102 FOXH1 JASPAR yes 70815605
chr19 16194091 16194102 FOXH1 JASPAR yes 112625990
chr19 16194094 16194108 POU1F1 JASPAR yes 70815606
chr19 16194094 16194108 POU1F1 JASPAR yes 112625991
chr19 16194098 16194106 HOXA5 JASPAR yes 70815607
chr19 16194098 16194106 HOXA5 JASPAR yes 112625992
chr19 16194099 16194109 NOTO JASPAR yes 70815608
chr19 16194099 16194109 NOTO JASPAR yes 112625993
chr19 16194109 16194119 SP1 JASPAR yes 70815609
chr19 16194109 16194119 SP1 JASPAR yes 112625994
chr19 16194119 16194124 SP1 TRANSFAC yes 70815610
chr19 16194119 16194124 SP1 TRANSFAC yes 112625995
chr19 16194119 16194128 HIC2 JASPAR yes 70815611
chr19 16194119 16194128 HIC2 JASPAR yes 112625996
chr19 16194122 16194126 LFA1 TRANSFAC yes 70815612
chr19 16194122 16194126 LFA1 TRANSFAC yes 112625997
chr19 16194123 16194133 ID4 JASPAR yes 70815613
chr19 16194123 16194133 TCF3 JASPAR yes 70815614
chr19 16194123 16194133 TCF4 JASPAR yes 70815615
chr19 16194123 16194133 ID4 JASPAR yes 112625998
chr19 16194123 16194133 TCF3 JASPAR yes 112625999
chr19 16194123 16194133 TCF4 JASPAR yes 112626000
chr19 16194124 16194133 SNAI2 JASPAR yes 70815616
chr19 16194124 16194133 SNAI2 JASPAR yes 112626001
chr19 16194125 16194130 USF2 TRANSFAC yes 70815617
chr19 16194125 16194130 USF2 TRANSFAC yes 112626002
chr19 16194134 16194142 TBX15 JASPAR yes 70815618
chr19 16194134 16194142 TBX15 JASPAR yes 112626003
chr19 16194181 16194202 ZNF263 JASPAR yes 70815619
chr19 16194181 16194202 ZNF263 JASPAR yes 112626004
chr19 16194190 16194209 PAX5 JASPAR yes 70815620
chr19 16194190 16194209 PAX5 JASPAR yes 112626005
chr19 16194228 16194247 PAX5 JASPAR yes 70815621
chr19 16194228 16194247 PAX5 JASPAR yes 112626006
chr19 16194230 16194234 LFA1 TRANSFAC yes 70815622
chr19 16194230 16194234 LFA1 TRANSFAC yes 112626007
chr19 16194248 16194252 NFE TRANSFAC yes 70815623
chr19 16194248 16194252 NFE TRANSFAC yes 112626008
chr19 16194249 16194270 IRF1 JASPAR yes 70815624
chr19 16194249 16194270 IRF1 JASPAR yes 112626009
SNP sites on vista28806[chr19:16193841-16194249]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28806[chr19:16193841-16194249]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 16177831 16213813 + TPM4 ENSG00000167460.10 16177831 0.73 0.99 17180 83990
chr19 16222439 16245044 + RAB8A ENSG00000167461.7 16222439 0.89 1.0 17181 71810
chr19 16244838 16269386 + HSH2D ENSG00000196684.8 16244838 0.91 1.0 17182 49411
chr19 16272179 16284336 - CIB3 ENSG00000141977.5 16284336 0.98 1.0 17183 9913
Expression level of Genes
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miRNAs possibly regulated by vista28806[chr19:16193841-16194249]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results