EnhancerDB
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  3. vista28808[chr19:16229373-16229857]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28808[chr19:16229373-16229857]
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Tissue distribution of vista28808
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Transcription factor that possibly regulate vista28808[chr19:16229373-16229857]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 16228365 16230004 POLR2A UCSC Txn Factor no Conserved 108392904
chr19 16229125 16229820 EBF1 UCSC Txn Factor no Conserved 108392910
chr19 16229303 16229822 NFIC UCSC Txn Factor no Conserved 108392918
chr19 16229313 16229605 TCF3 UCSC Txn Factor no Conserved 108392921
chr19 16229321 16229709 EP300 UCSC Txn Factor no Conserved 108392925
chr19 16229332 16229640 TCF12 UCSC Txn Factor no Conserved 108392926
chr19 16229337 16229773 RUNX3 UCSC Txn Factor no Conserved 108392928
chr19 16229346 16229826 SPI1 UCSC Txn Factor no Conserved 108392931
chr19 16229365 16229720 FOXM1 UCSC Txn Factor no Conserved 108392934
chr19 16229367 16229724 ATF2 UCSC Txn Factor no Conserved 108392938
chr19 16229368 16229612 BATF UCSC Txn Factor no Conserved 108392940
chr19 16229382 16229709 BCL11A UCSC Txn Factor no Conserved 108392946
chr19 16229404 16229409 ETS2 TRANSFAC yes 70815699
chr19 16229417 16229436 REST JASPAR yes 70815700
chr19 16229424 16229434 ID4 JASPAR yes 70815701
chr19 16229424 16229434 TCF3 JASPAR yes 70815702
chr19 16229424 16229434 TCF4 JASPAR yes 70815703
chr19 16229431 16229443 CREB1 JASPAR yes 70815704
chr19 16229439 16229451 TFAP2A JASPAR yes 70815705
chr19 16229475 16229480 ETS2 TRANSFAC yes 70815706
chr19 16229512 16229516 H4TF2 TRANSFAC yes 70815707
chr19 16229519 16229540 IRF1 JASPAR yes 70815708
chr19 16229521 16229532 ELK4 JASPAR yes 70815709
chr19 16229521 16229532 FLI1 JASPAR yes 70815710
chr19 16229521 16229534 ELF3 JASPAR yes 70815711
chr19 16229521 16229536 STAT2 JASPAR yes 70815712
chr19 16229521 16229542 ZNF263 JASPAR yes 70815713
chr19 16229522 16229532 ETV6 JASPAR yes 70815714
chr19 16229522 16229532 GABPA JASPAR yes 70815715
chr19 16229522 16229533 ELF5 JASPAR yes 70815716
chr19 16229522 16229533 ETV2 JASPAR yes 70815717
chr19 16229522 16229534 EHF JASPAR yes 70815718
chr19 16229522 16229534 ELF1 JASPAR yes 70815719
chr19 16229522 16229534 ELF4 JASPAR yes 70815720
chr19 16229522 16229535 ELF1 JASPAR yes 70815721
chr19 16229522 16229536 SPI1 JASPAR yes 70815722
chr19 16229522 16229536 SPIC JASPAR yes 70815723
chr19 16229523 16229530 SPI1 JASPAR yes 70815724
chr19 16229523 16229531 EHF JASPAR yes 70815725
chr19 16229525 16229532 SPIB JASPAR yes 70815726
chr19 16229533 16229548 TFAP2A JASPAR yes 70815727
chr19 16229534 16229548 EBF1 JASPAR yes 70815728
chr19 16229535 16229546 EBF1 JASPAR yes 70815729
chr19 16229536 16229548 TFAP2A JASPAR yes 70815730
chr19 16229536 16229548 TFAP2B JASPAR yes 70815731
chr19 16229536 16229548 TFAP2C JASPAR yes 70815732
chr19 16229536 16229551 TFAP2A JASPAR yes 70815733
chr19 16229536 16229551 TFAP2C JASPAR yes 70815734
chr19 16229537 16229548 EBF1 JASPAR yes 70815735
chr19 16229537 16229548 TFAP2A JASPAR yes 70815736
chr19 16229538 16229547 TFAP2A JASPAR yes 70815737
chr19 16229543 16229547 LFA1 TRANSFAC yes 70815738
chr19 16229559 16229567 EHF JASPAR yes 70815739
chr19 16229580 16229601 IRF1 JASPAR yes 70815740
chr19 16229582 16229597 IRF9 JASPAR yes 70815741
chr19 16229583 16229597 IRF7 JASPAR yes 70815742
chr19 16229583 16229597 IRF8 JASPAR yes 70815743
chr19 16229610 16229624 ZIC1 JASPAR yes 70815744
chr19 16229610 16229625 ZIC4 JASPAR yes 70815745
chr19 16229612 16229632 TP63 JASPAR yes 70815746
chr19 16229613 16229631 TP53 JASPAR yes 70815747
chr19 16229613 16229631 TP73 JASPAR yes 70815748
chr19 16229615 16229630 TP53 JASPAR yes 70815749
chr19 16229624 16229630 PTF TRANSFAC yes 70815750
chr19 16229625 16229640 STAT2 JASPAR yes 70815751
chr19 16229626 16229640 STAT1 JASPAR yes 70815752
chr19 16229627 16229635 FOXO3 JASPAR yes 70815753
chr19 16229627 16229637 NFATC3 JASPAR yes 70815754
chr19 16229669 16229677 BARX1 JASPAR yes 70815755
chr19 16229670 16229684 SPI1 JASPAR yes 70815756
chr19 16229676 16229681 ETS2 TRANSFAC yes 70815757
chr19 16229682 16229687 TFAP2A TRANSFAC yes 70815758
chr19 16229682 16229688 MZF1 JASPAR yes 70815759
chr19 16229699 16229705 YY1 JASPAR yes 70815760
chr19 16229706 16229716 SREBF2 JASPAR yes 70815761
chr19 16229717 16229735 MAFF JASPAR yes 70815762
chr19 16229719 16229730 NRL JASPAR yes 70815763
chr19 16229719 16229734 MAFK JASPAR yes 70815764
chr19 16229734 16229751 RXRA JASPAR yes 70815765
chr19 16229739 16229759 RREB1 JASPAR yes 70815766
chr19 16229743 16229748 SP1 TRANSFAC yes 70815767
chr19 16229757 16229761 H4TF2 TRANSFAC yes 70815768
chr19 16229795 16229809 TLX1 JASPAR yes 70815769
chr19 16229800 16229815 FOXP1 JASPAR yes 70815770
chr19 16229809 16229815 SOX10 JASPAR yes 70815771
chr19 16229823 16229827 YY1 TRANSFAC yes 70815772
chr19 16229833 16229844 CEBPA JASPAR yes 70815773
chr19 16229834 16229845 CEBPB JASPAR yes 70815774
chr19 16229839 16229854 PRDM1 JASPAR yes 70815775
chr19 16229847 16229855 MEIS3 JASPAR yes 70815776
chr19 16229848 16229852 NFE TRANSFAC yes 70815777
SNP sites on vista28808[chr19:16229373-16229857]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28808[chr19:16229373-16229857]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 16177831 16213813 + TPM4 ENSG00000167460.10 16177831 0.73 0.99 17180 48458
chr19 16222439 16245044 + RAB8A ENSG00000167461.7 16222439 0.89 1.0 17181 93066
chr19 16244838 16269386 + HSH2D ENSG00000196684.8 16244838 0.91 1.0 17182 85019
chr19 16272179 16284336 - CIB3 ENSG00000141977.5 16284336 0.98 1.0 17183 45521
chr19 16296191 16302857 + FAM32A ENSG00000105058.7 16296191 0.55 0.99 17184 33666
chr19 16308389 16346160 + AP1M1 ENSG00000072958.4 16308389 0.56 1.0 17185 21468
Expression level of Genes
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miRNAs possibly regulated by vista28808[chr19:16229373-16229857]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results