EnhancerDB
  1. Home
  2. Enhancers
  3. vista28812[chr19:16279649-16279838]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28812[chr19:16279649-16279838]
Back to top
Tissue distribution of vista28812
Back to top
Transcription factor that possibly regulate vista28812[chr19:16279649-16279838]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 16279641 16279661 RREB1 JASPAR yes 70815827
chr19 16279641 16279661 RREB1 JASPAR yes 112632037
chr19 16279647 16279667 RREB1 JASPAR yes 70815828
chr19 16279647 16279667 RREB1 JASPAR yes 112632038
chr19 16279648 16279654 TCF4 TRANSFAC yes 70815829
chr19 16279648 16279654 TCF4 TRANSFAC yes 112632039
chr19 16279664 16279668 LFA1 TRANSFAC yes 70815830
chr19 16279664 16279668 LFA1 TRANSFAC yes 112632040
chr19 16279672 16279676 YY1 TRANSFAC yes 70815831
chr19 16279672 16279676 YY1 TRANSFAC yes 112632041
chr19 16279682 16279700 NR3C1 JASPAR yes 70815832
chr19 16279682 16279700 NR3C1 JASPAR yes 112632042
chr19 16279684 16279699 AR JASPAR yes 70815833
chr19 16279684 16279699 AR JASPAR yes 112632043
chr19 16279691 16279695 NFE TRANSFAC yes 70815834
chr19 16279691 16279695 NFE TRANSFAC yes 112632044
chr19 16279695 16279713 SRF JASPAR yes 70815835
chr19 16279695 16279713 SRF JASPAR yes 112632045
chr19 16279706 16279724 ESR1 JASPAR yes 70815836
chr19 16279706 16279724 ESR1 JASPAR yes 112632046
chr19 16279720 16279731 CDX2 JASPAR yes 70815837
chr19 16279720 16279731 CDX2 JASPAR yes 112632047
chr19 16279721 16279732 HOXA10 JASPAR yes 70815838
chr19 16279721 16279732 HOXA10 JASPAR yes 112632048
chr19 16279722 16279731 CDX1 JASPAR yes 70815839
chr19 16279722 16279731 CDX1 JASPAR yes 112632049
chr19 16279722 16279732 HOXA13 JASPAR yes 70815840
chr19 16279722 16279732 HOXB13 JASPAR yes 70815841
chr19 16279722 16279732 HOXD13 JASPAR yes 70815842
chr19 16279722 16279732 HOXA13 JASPAR yes 112632050
chr19 16279722 16279732 HOXB13 JASPAR yes 112632051
chr19 16279722 16279732 HOXD13 JASPAR yes 112632052
chr19 16279756 16279771 RUNX2 JASPAR yes 70815843
chr19 16279756 16279771 RUNX2 JASPAR yes 112632053
chr19 16279769 16279782 TFAP2B JASPAR yes 70815844
chr19 16279769 16279782 TFAP2C JASPAR yes 70815845
chr19 16279769 16279782 TFAP2B JASPAR yes 112632054
chr19 16279769 16279782 TFAP2C JASPAR yes 112632055
chr19 16279785 16279795 NEUROG2 JASPAR yes 70815846
chr19 16279785 16279795 NEUROG2 JASPAR yes 112632056
chr19 16279786 16279796 MAX JASPAR yes 70815847
chr19 16279786 16279796 MAX JASPAR yes 112632057
chr19 16279788 16279798 TBR1 JASPAR yes 70815848
chr19 16279788 16279798 TBR1 JASPAR yes 112632058
chr19 16279796 16279807 SPDEF JASPAR yes 70815849
chr19 16279796 16279807 SPDEF JASPAR yes 112632059
chr19 16279804 16279818 GATA2 JASPAR yes 70815850
chr19 16279804 16279818 GATA2 JASPAR yes 112632060
chr19 16279819 16279823 YY1 TRANSFAC yes 70815851
chr19 16279819 16279823 YY1 TRANSFAC yes 112632061
SNP sites on vista28812[chr19:16279649-16279838]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28812[chr19:16279649-16279838]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 16222439 16245044 + RAB8A ENSG00000167461.7 16222439 0.89 1.0 17181 42790
chr19 16244838 16269386 + HSH2D ENSG00000196684.8 16244838 0.91 1.0 17182 65189
chr19 16272179 16284336 - CIB3 ENSG00000141977.5 16284336 0.98 1.0 17183 95502
chr19 16296191 16302857 + FAM32A ENSG00000105058.7 16296191 0.55 0.99 17184 83647
chr19 16308389 16346160 + AP1M1 ENSG00000072958.4 16308389 0.56 1.0 17185 71449
Expression level of Genes
Back to top
miRNAs possibly regulated by vista28812[chr19:16279649-16279838]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results