EnhancerDB
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  3. vista28838[chr19:16696208-16696379]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28838[chr19:16696208-16696379]
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Tissue distribution of vista28838
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Transcription factor that possibly regulate vista28838[chr19:16696208-16696379]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 16694892 16701219 POLR2A UCSC Txn Factor no Conserved 108393986
chr19 16694892 16701219 POLR2A UCSC Txn Factor no Conserved 108393987
chr19 16696202 16696211 NKX2-8 JASPAR yes 70817313
chr19 16696202 16696211 NKX2-8 JASPAR yes 112661032
chr19 16696202 16696212 NKX2-3 JASPAR yes 70817314
chr19 16696202 16696212 NKX2-3 JASPAR yes 112661033
chr19 16696203 16696221 ESR1 JASPAR yes 70817315
chr19 16696203 16696221 ESR1 JASPAR yes 112661034
chr19 16696219 16696230 E2F6 JASPAR yes 70817316
chr19 16696219 16696230 E2F6 JASPAR yes 112661035
chr19 16696229 16696239 NFIA JASPAR yes 70817317
chr19 16696229 16696239 NFIA JASPAR yes 112661036
chr19 16696230 16696239 NFIX JASPAR yes 70817318
chr19 16696230 16696239 NFIX JASPAR yes 112661037
chr19 16696231 16696237 NFIC JASPAR yes 70817319
chr19 16696231 16696237 NFIC JASPAR yes 112661038
chr19 16696243 16696248 SP1 TRANSFAC yes 70817320
chr19 16696243 16696248 SP1 TRANSFAC yes 112661039
chr19 16696249 16696260 NFE2L2 JASPAR yes 70817321
chr19 16696249 16696260 NFE2L2 JASPAR yes 112661040
chr19 16696251 16696269 ESR2 JASPAR yes 70817322
chr19 16696251 16696269 ESR2 JASPAR yes 112661041
chr19 16696253 16696268 ESR2 JASPAR yes 70817323
chr19 16696253 16696268 ESR2 JASPAR yes 112661042
chr19 16696254 16696258 ESR1 TRANSFAC yes 70817324
chr19 16696254 16696258 ESR1 TRANSFAC yes 112661043
chr19 16696281 16696290 SRY JASPAR yes 70817325
chr19 16696281 16696290 SRY JASPAR yes 112661044
chr19 16696283 16696286 MYB TRANSFAC yes 70817326
chr19 16696283 16696286 MYB TRANSFAC yes 112661045
chr19 16696288 16696299 NFE2L2 JASPAR yes 70817327
chr19 16696288 16696299 NFE2L2 JASPAR yes 112661046
chr19 16696300 16696303 MYB TRANSFAC yes 70817328
chr19 16696300 16696303 MYB TRANSFAC yes 112661047
chr19 16696307 16696312 ETS2 TRANSFAC yes 70817329
chr19 16696307 16696312 ETS2 TRANSFAC yes 112661048
chr19 16696313 16696325 PKNOX1 JASPAR yes 70817330
chr19 16696313 16696325 PKNOX2 JASPAR yes 70817331
chr19 16696313 16696325 TGIF1 JASPAR yes 70817332
chr19 16696313 16696325 TGIF2 JASPAR yes 70817333
chr19 16696313 16696325 PKNOX1 JASPAR yes 112661049
chr19 16696313 16696325 PKNOX2 JASPAR yes 112661050
chr19 16696313 16696325 TGIF1 JASPAR yes 112661051
chr19 16696313 16696325 TGIF2 JASPAR yes 112661052
chr19 16696321 16696331 SREBF2 JASPAR yes 70817334
chr19 16696321 16696331 SREBF2 JASPAR yes 112661053
chr19 16696337 16696345 SP1 TRANSFAC yes 70817335
chr19 16696337 16696345 SP1 TRANSFAC yes 112661054
chr19 16696342 16696360 MAFF JASPAR yes 70817336
chr19 16696342 16696360 MAFF JASPAR yes 112661055
chr19 16696343 16696358 MAFK JASPAR yes 70817337
chr19 16696343 16696358 MAFK JASPAR yes 112661056
chr19 16696356 16696367 E2F6 JASPAR yes 70817338
chr19 16696356 16696367 E2F6 JASPAR yes 112661057
chr19 16696374 16696380 ZNF354C JASPAR yes 70817339
chr19 16696374 16696380 ZNF354C JASPAR yes 112661058
SNP sites on vista28838[chr19:16696208-16696379]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28838[chr19:16696208-16696379]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 16589868 16607003 - CALR3 ENSG00000269058.1 16607003 0.82 0.91 17188 10795
chr19 16589878 16739015 - CTD-3222D19.2 ENSG00000141979.4 16739015 0.0 0.96 17189 57364
chr19 16607122 16632163 + C19orf44 ENSG00000105072.4 16607122 0.78 1.0 17190 10914
chr19 16628700 16653341 - CHERP ENSG00000085872.10 16653341 0.63 1.0 17191 57133
chr19 16660642 16683193 - SLC35E1 ENSG00000127526.9 16683193 0.65 1.0 17192 86985
chr19 16685718 16739873 - MED26 ENSG00000105085.6 16739873 0.57 0.99 17193 56506
chr19 16688453 16770926 - CTC-429P9.4 ENSG00000268790.1 16770926 0.94 0.95 17194 25453
chr19 16741562 16771253 - SMIM7 ENSG00000214046.4 16771253 0.66 0.99 17195 25126
chr19 16771938 16800840 + TMEM38A ENSG00000072954.2 16771938 0.74 1.0 17196 24441
Expression level of Genes
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miRNAs possibly regulated by vista28838[chr19:16696208-16696379]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results