EnhancerDB
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  3. vista28840[chr19:16704980-16705245]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28840[chr19:16704980-16705245]
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Tissue distribution of vista28840
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Transcription factor that possibly regulate vista28840[chr19:16704980-16705245]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 16704935 16705288 RUNX3 UCSC Txn Factor no Conserved 108394055
chr19 16704965 16705212 EBF1 UCSC Txn Factor no Conserved 108394059
chr19 16704968 16704983 PRDM1 JASPAR yes 70817407
chr19 16704968 16704983 PRDM1 JASPAR yes 112662358
chr19 16705001 16705020 CTCF JASPAR yes 70817408
chr19 16705001 16705020 CTCF JASPAR yes 112662359
chr19 16705004 16705012 GATA5 JASPAR yes 70817409
chr19 16705004 16705012 GATA5 JASPAR yes 112662360
chr19 16705026 16705030 LFA1 TRANSFAC yes 70817410
chr19 16705026 16705030 LFA1 TRANSFAC yes 112662361
chr19 16705039 16705052 TFAP2A JASPAR yes 70817411
chr19 16705039 16705052 TFAP2A JASPAR yes 112662362
chr19 16705057 16705069 HES5 JASPAR yes 70817412
chr19 16705057 16705069 HES5 JASPAR yes 112662363
chr19 16705074 16705094 RREB1 JASPAR yes 70817413
chr19 16705074 16705094 RREB1 JASPAR yes 112662364
chr19 16705085 16705096 FLI1 JASPAR yes 70817414
chr19 16705085 16705096 FLI1 JASPAR yes 112662365
chr19 16705086 16705099 ELF1 JASPAR yes 70817415
chr19 16705086 16705099 ELF1 JASPAR yes 112662366
chr19 16705087 16705094 SPI1 JASPAR yes 70817416
chr19 16705087 16705094 SPI1 JASPAR yes 112662367
chr19 16705087 16705095 FEV JASPAR yes 70817417
chr19 16705087 16705095 FEV JASPAR yes 112662368
chr19 16705089 16705094 ETS2 TRANSFAC yes 70817418
chr19 16705089 16705094 ETS2 TRANSFAC yes 112662369
chr19 16705091 16705099 EHF JASPAR yes 70817419
chr19 16705091 16705099 EHF JASPAR yes 112662370
chr19 16705093 16705098 ETS2 TRANSFAC yes 70817420
chr19 16705093 16705098 ETS2 TRANSFAC yes 112662371
chr19 16705096 16705110 E2F7 JASPAR yes 70817421
chr19 16705096 16705110 E2F7 JASPAR yes 112662372
chr19 16705097 16705109 E2F8 JASPAR yes 70817422
chr19 16705097 16705109 E2F8 JASPAR yes 112662373
chr19 16705113 16705132 CTCF JASPAR yes 70817423
chr19 16705113 16705132 CTCF JASPAR yes 112662374
chr19 16705128 16705139 EBF1 JASPAR yes 70817424
chr19 16705128 16705139 EBF1 JASPAR yes 112662375
chr19 16705132 16705137 TFAP2A TRANSFAC yes 70817425
chr19 16705132 16705137 TFAP2A TRANSFAC yes 112662376
chr19 16705132 16705138 MZF1 JASPAR yes 70817426
chr19 16705132 16705138 MZF1 JASPAR yes 112662377
chr19 16705133 16705144 NFKB1 JASPAR yes 70817427
chr19 16705133 16705144 NFKB1 JASPAR yes 112662378
chr19 16705134 16705145 NFKB1 JASPAR yes 70817428
chr19 16705134 16705145 NFKB1 JASPAR yes 112662379
chr19 16705135 16705145 RELA JASPAR yes 70817429
chr19 16705135 16705145 REL JASPAR yes 70817430
chr19 16705135 16705145 RELA JASPAR yes 112662380
chr19 16705135 16705145 REL JASPAR yes 112662381
chr19 16705200 16705211 ELK4 JASPAR yes 70817431
chr19 16705200 16705211 FLI1 JASPAR yes 70817432
chr19 16705200 16705211 ELK4 JASPAR yes 112662382
chr19 16705200 16705211 FLI1 JASPAR yes 112662383
chr19 16705200 16705213 ELF3 JASPAR yes 70817433
chr19 16705200 16705213 ELF3 JASPAR yes 112662384
chr19 16705201 16705211 ERF JASPAR yes 70817434
chr19 16705201 16705211 ETV6 JASPAR yes 70817435
chr19 16705201 16705211 ERF JASPAR yes 112662385
chr19 16705201 16705211 ETV6 JASPAR yes 112662386
chr19 16705201 16705212 ELF5 JASPAR yes 70817436
chr19 16705201 16705212 ELF5 JASPAR yes 112662387
chr19 16705201 16705213 EHF JASPAR yes 70817437
chr19 16705201 16705213 ELF1 JASPAR yes 70817438
chr19 16705201 16705213 ELF4 JASPAR yes 70817439
chr19 16705201 16705213 EHF JASPAR yes 112662388
chr19 16705201 16705213 ELF1 JASPAR yes 112662389
chr19 16705201 16705213 ELF4 JASPAR yes 112662390
chr19 16705201 16705214 ELF1 JASPAR yes 70817440
chr19 16705201 16705214 ELF1 JASPAR yes 112662391
chr19 16705201 16705215 ZIC1 JASPAR yes 70817441
chr19 16705201 16705215 ZIC1 JASPAR yes 112662392
chr19 16705201 16705216 ZIC3 JASPAR yes 70817442
chr19 16705201 16705216 ZIC3 JASPAR yes 112662393
chr19 16705202 16705209 SPI1 JASPAR yes 70817443
chr19 16705202 16705209 SPI1 JASPAR yes 112662394
chr19 16705202 16705210 EHF JASPAR yes 70817444
chr19 16705202 16705210 FEV JASPAR yes 70817445
chr19 16705202 16705210 EHF JASPAR yes 112662395
chr19 16705202 16705210 FEV JASPAR yes 112662396
chr19 16705235 16705245 NKX2-3 JASPAR yes 70817446
chr19 16705235 16705245 NKX2-3 JASPAR yes 112662397
chr19 16705241 16705246 TFAP2A TRANSFAC yes 70817447
chr19 16705241 16705246 TFAP2A TRANSFAC yes 112662398
chr19 16705241 16705247 MZF1 JASPAR yes 70817448
chr19 16705241 16705247 MZF1 JASPAR yes 112662399
chr19 16705242 16705252 SP1 JASPAR yes 70817449
chr19 16705242 16705252 SP1 JASPAR yes 112662400
chr19 16705243 16705248 ETS2 TRANSFAC yes 70817450
chr19 16705243 16705248 ETS2 TRANSFAC yes 112662401
chr19 16705245 16705266 IRF1 JASPAR yes 70817451
chr19 16705245 16705266 IRF1 JASPAR yes 112662402
SNP sites on vista28840[chr19:16704980-16705245]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28840[chr19:16704980-16705245]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 16589868 16607003 - CALR3 ENSG00000269058.1 16607003 0.82 0.91 17188 2023
chr19 16589878 16739015 - CTD-3222D19.2 ENSG00000141979.4 16739015 0.0 0.96 17189 66230
chr19 16607122 16632163 + C19orf44 ENSG00000105072.4 16607122 0.78 1.0 17190 2142
chr19 16628700 16653341 - CHERP ENSG00000085872.10 16653341 0.63 1.0 17191 48361
chr19 16660642 16683193 - SLC35E1 ENSG00000127526.9 16683193 0.65 1.0 17192 78213
chr19 16685718 16739873 - MED26 ENSG00000105085.6 16739873 0.57 0.99 17193 65372
chr19 16688453 16770926 - CTC-429P9.4 ENSG00000268790.1 16770926 0.94 0.95 17194 34319
chr19 16741562 16771253 - SMIM7 ENSG00000214046.4 16771253 0.66 0.99 17195 33992
chr19 16771938 16800840 + TMEM38A ENSG00000072954.2 16771938 0.74 1.0 17196 33307
Expression level of Genes
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miRNAs possibly regulated by vista28840[chr19:16704980-16705245]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results