EnhancerDB
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  3. vista28848[chr19:17176287-17176664]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28848[chr19:17176287-17176664]
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Tissue distribution of vista28848
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Transcription factor that possibly regulate vista28848[chr19:17176287-17176664]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 17176270 17176288 SRF JASPAR yes 70817720
chr19 17176270 17176288 SRF JASPAR yes 112678905
chr19 17176276 17176291 NFYB JASPAR yes 70817721
chr19 17176276 17176291 NFYB JASPAR yes 112678906
chr19 17176278 17176294 NFYA JASPAR yes 70817722
chr19 17176278 17176294 NFYA JASPAR yes 112678907
chr19 17176279 17176297 NFYA JASPAR yes 70817723
chr19 17176279 17176297 NFYA JASPAR yes 112678908
chr19 17176283 17176287 H1TF2 TRANSFAC yes 70817724
chr19 17176283 17176287 NFE TRANSFAC yes 70817725
chr19 17176283 17176287 SRF TRANSFAC yes 70817726
chr19 17176283 17176287 H1TF2 TRANSFAC yes 112678909
chr19 17176283 17176287 NFE TRANSFAC yes 112678910
chr19 17176283 17176287 SRF TRANSFAC yes 112678911
chr19 17176290 17176294 YY1 TRANSFAC yes 70817727
chr19 17176290 17176294 YY1 TRANSFAC yes 112678912
chr19 17176303 17176307 NFE TRANSFAC yes 70817728
chr19 17176303 17176307 NFE TRANSFAC yes 112678913
chr19 17176341 17176345 TEAD2 TRANSFAC yes 70817729
chr19 17176341 17176345 TEAD2 TRANSFAC yes 112678914
chr19 17176341 17176346 TBP TRANSFAC yes 70817730
chr19 17176341 17176346 TBP TRANSFAC yes 112678915
chr19 17176341 17176347 TFIID TRANSFAC yes 70817731
chr19 17176341 17176347 TFIID TRANSFAC yes 112678916
chr19 17176345 17176357 IRF1 JASPAR yes 70817732
chr19 17176345 17176357 IRF1 JASPAR yes 112678917
chr19 17176360 17176370 SP1 JASPAR yes 70817733
chr19 17176360 17176370 SP1 JASPAR yes 112678918
chr19 17176366 17176377 FOSL2 JASPAR yes 70817734
chr19 17176366 17176377 FOSL2 JASPAR yes 112678919
chr19 17176367 17176378 NFE2 JASPAR yes 70817735
chr19 17176367 17176378 NFE2 JASPAR yes 112678920
chr19 17176399 17176413 PLAG1 JASPAR yes 70817736
chr19 17176399 17176413 PLAG1 JASPAR yes 112678921
chr19 17176407 17176412 SP1 TRANSFAC yes 70817737
chr19 17176407 17176412 SP1 TRANSFAC yes 112678922
chr19 17176410 17176414 LFA1 TRANSFAC yes 70817738
chr19 17176410 17176414 LFA1 TRANSFAC yes 112678923
chr19 17176419 17176432 NR2F1 JASPAR yes 70817739
chr19 17176419 17176432 NR2F1 JASPAR yes 112678924
chr19 17176421 17176439 RARA JASPAR yes 70817740
chr19 17176421 17176439 RARA JASPAR yes 112678925
chr19 17176423 17176427 ESR1 TRANSFAC yes 70817741
chr19 17176423 17176427 ESR1 TRANSFAC yes 112678926
chr19 17176431 17176451 ESR1 JASPAR yes 70817742
chr19 17176431 17176451 ESR1 JASPAR yes 112678927
chr19 17176435 17176453 NR3C1 JASPAR yes 70817743
chr19 17176435 17176453 NR3C1 JASPAR yes 112678928
chr19 17176449 17176461 YY1 JASPAR yes 70817744
chr19 17176449 17176461 YY1 JASPAR yes 112678929
chr19 17176470 17176485 MEF2C JASPAR yes 70817745
chr19 17176470 17176485 MEF2C JASPAR yes 112678930
chr19 17176471 17176486 MEF2A JASPAR yes 70817746
chr19 17176471 17176486 MEF2A JASPAR yes 112678931
chr19 17176472 17176484 MEF2A JASPAR yes 70817747
chr19 17176472 17176484 MEF2B JASPAR yes 70817748
chr19 17176472 17176484 MEF2D JASPAR yes 70817749
chr19 17176472 17176484 MEF2A JASPAR yes 112678932
chr19 17176472 17176484 MEF2B JASPAR yes 112678933
chr19 17176472 17176484 MEF2D JASPAR yes 112678934
chr19 17176478 17176493 MEF2C JASPAR yes 70817750
chr19 17176478 17176493 MEF2C JASPAR yes 112678935
chr19 17176479 17176494 MEF2A JASPAR yes 70817751
chr19 17176479 17176494 MEF2A JASPAR yes 112678936
chr19 17176566 17176583 ESR1 JASPAR yes 70817752
chr19 17176566 17176583 ESR1 JASPAR yes 112678937
chr19 17176566 17176584 ESR2 JASPAR yes 70817753
chr19 17176566 17176584 ESR2 JASPAR yes 112678938
chr19 17176570 17176584 TLX1 JASPAR yes 70817754
chr19 17176570 17176584 TLX1 JASPAR yes 112678939
chr19 17176595 17176605 TEAD1 JASPAR yes 70817755
chr19 17176595 17176605 TEAD4 JASPAR yes 70817756
chr19 17176595 17176605 TEAD1 JASPAR yes 112678940
chr19 17176595 17176605 TEAD4 JASPAR yes 112678941
chr19 17176595 17176607 TEAD1 JASPAR yes 70817757
chr19 17176595 17176607 TEAD1 JASPAR yes 112678942
chr19 17176596 17176604 TEAD3 JASPAR yes 70817758
chr19 17176596 17176604 TEAD3 JASPAR yes 112678943
chr19 17176606 17176625 PAX5 JASPAR yes 70817759
chr19 17176606 17176625 PAX5 JASPAR yes 112678944
chr19 17176626 17176630 NFE TRANSFAC yes 70817760
chr19 17176626 17176630 NFE TRANSFAC yes 112678945
chr19 17176626 17176631 GATA1 TRANSFAC yes 70817761
chr19 17176626 17176631 GATA1 TRANSFAC yes 112678946
chr19 17176626 17176632 GATA3 JASPAR yes 70817762
chr19 17176626 17176632 GATA3 JASPAR yes 112678947
chr19 17176630 17176645 FOXP1 JASPAR yes 70817763
chr19 17176630 17176645 FOXP1 JASPAR yes 112678948
chr19 17176631 17176646 FOXP1 JASPAR yes 70817764
chr19 17176631 17176646 FOXP1 JASPAR yes 112678949
chr19 17176632 17176647 FOXP1 JASPAR yes 70817765
chr19 17176632 17176647 FOXP1 JASPAR yes 112678950
chr19 17176633 17176648 FOXP1 JASPAR yes 70817766
chr19 17176633 17176648 FOXP1 JASPAR yes 112678951
chr19 17176634 17176649 FOXP1 JASPAR yes 70817767
chr19 17176634 17176649 FOXP1 JASPAR yes 112678952
chr19 17176634 17176655 IRF1 JASPAR yes 70817768
chr19 17176634 17176655 IRF1 JASPAR yes 112678953
chr19 17176635 17176650 FOXP1 JASPAR yes 70817769
chr19 17176635 17176650 FOXP1 JASPAR yes 112678954
SNP sites on vista28848[chr19:17176287-17176664]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28848[chr19:17176287-17176664]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 17003758 17137625 - CPAMD8 ENSG00000160111.8 17137625 0.91 0.99 17200 61338
chr19 17160539 17186435 - HAUS8 ENSG00000131351.10 17186435 0.87 0.99 17201 90229
chr19 17186591 17325346 + MYO9B ENSG00000099331.9 17186591 0.75 1.0 17202 90073
Expression level of Genes
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miRNAs possibly regulated by vista28848[chr19:17176287-17176664]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results