EnhancerDB
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  3. vista28858[chr19:17220741-17221250]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28858[chr19:17220741-17221250]
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Tissue distribution of vista28858
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Transcription factor that possibly regulate vista28858[chr19:17220741-17221250]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 17220611 17221175 RUNX3 UCSC Txn Factor no Conserved 108394547
chr19 17220917 17221152 SPI1 UCSC Txn Factor no Conserved 108394571
chr19 17220730 17220745 RUNX2 JASPAR yes 70818526
chr19 17220730 17220745 RUNX2 JASPAR yes 112682572
chr19 17220757 17220772 TFAP2C JASPAR yes 70818527
chr19 17220757 17220772 TFAP2C JASPAR yes 112682573
chr19 17220761 17220767 MZF1 JASPAR yes 70818528
chr19 17220761 17220767 MZF1 JASPAR yes 112682574
chr19 17220792 17220795 MYB TRANSFAC yes 70818529
chr19 17220792 17220795 MYB TRANSFAC yes 112682575
chr19 17220802 17220816 MTF1 JASPAR yes 70818530
chr19 17220802 17220816 MTF1 JASPAR yes 112682576
chr19 17220820 17220828 SP1 TRANSFAC yes 70818531
chr19 17220820 17220828 SP1 TRANSFAC yes 112682577
chr19 17220820 17220830 SP1 JASPAR yes 70818532
chr19 17220820 17220830 SP1 JASPAR yes 112682578
chr19 17220842 17220863 ZNF263 JASPAR yes 70818533
chr19 17220842 17220863 ZNF263 JASPAR yes 112682579
chr19 17220886 17220897 NRL JASPAR yes 70818534
chr19 17220886 17220897 NRL JASPAR yes 112682580
chr19 17220907 17220912 NFY TRANSFAC yes 70818535
chr19 17220907 17220912 NFY TRANSFAC yes 112682581
chr19 17220910 17220915 TFAP2A TRANSFAC yes 70818536
chr19 17220910 17220915 TFAP2A TRANSFAC yes 112682582
chr19 17220910 17220916 MZF1 JASPAR yes 70818537
chr19 17220910 17220916 MZF1 JASPAR yes 112682583
chr19 17220932 17220946 SPI1 JASPAR yes 70818538
chr19 17220932 17220946 SPI1 JASPAR yes 112682584
chr19 17220946 17220965 REST JASPAR yes 70818539
chr19 17220946 17220965 REST JASPAR yes 112682585
chr19 17220949 17220964 RUNX2 JASPAR yes 70818540
chr19 17220949 17220964 RUNX2 JASPAR yes 112682586
chr19 17220952 17220963 RUNX1 JASPAR yes 70818541
chr19 17220952 17220963 RUNX1 JASPAR yes 112682587
chr19 17220978 17220990 INSM1 JASPAR yes 70818542
chr19 17220978 17220990 INSM1 JASPAR yes 112682588
chr19 17220978 17220993 NR2C2 JASPAR yes 70818543
chr19 17220978 17220993 NR2C2 JASPAR yes 112682589
chr19 17220979 17220993 PLAG1 JASPAR yes 70818544
chr19 17220979 17220993 PLAG1 JASPAR yes 112682590
chr19 17220981 17220994 NR2F1 JASPAR yes 70818545
chr19 17220981 17220994 NR2F1 JASPAR yes 112682591
chr19 17220985 17221000 NR2C2 JASPAR yes 70818546
chr19 17220985 17221000 NR2C2 JASPAR yes 112682592
chr19 17220988 17220997 SP1 TRANSFAC yes 70818547
chr19 17220988 17220997 SP1 TRANSFAC yes 112682593
chr19 17220989 17220995 SP1 TRANSFAC yes 70818548
chr19 17220989 17220995 SP1 TRANSFAC yes 112682594
chr19 17220989 17220999 SP1 JASPAR yes 70818549
chr19 17220989 17220999 SP1 JASPAR yes 112682595
chr19 17220990 17220997 SP1 TRANSFAC yes 70818550
chr19 17220990 17220997 SP1 TRANSFAC yes 112682596
chr19 17220991 17220996 SP1 TRANSFAC yes 70818551
chr19 17220991 17220996 SP1 TRANSFAC yes 112682597
chr19 17220991 17220997 SP1 TRANSFAC yes 70818552
chr19 17220991 17220997 SP1 TRANSFAC yes 112682598
chr19 17220991 17220998 SP1 TRANSFAC yes 70818553
chr19 17220991 17220998 SP1 TRANSFAC yes 112682599
chr19 17220992 17221006 GLIS2 JASPAR yes 70818554
chr19 17220992 17221006 GLIS3 JASPAR yes 70818555
chr19 17220992 17221006 GLIS2 JASPAR yes 112682600
chr19 17220992 17221006 GLIS3 JASPAR yes 112682601
chr19 17220995 17221010 ZBTB33 JASPAR yes 70818556
chr19 17220995 17221010 ZBTB33 JASPAR yes 112682602
chr19 17221016 17221027 NFE2L2 JASPAR yes 70818557
chr19 17221016 17221027 NFE2L2 JASPAR yes 112682603
chr19 17221020 17221038 MAFF JASPAR yes 70818558
chr19 17221020 17221038 MAFF JASPAR yes 112682604
chr19 17221022 17221033 NRL JASPAR yes 70818559
chr19 17221022 17221033 NRL JASPAR yes 112682605
chr19 17221022 17221037 MAFK JASPAR yes 70818560
chr19 17221022 17221037 MAFK JASPAR yes 112682606
chr19 17221035 17221049 SPI1 JASPAR yes 70818561
chr19 17221035 17221049 SPIC JASPAR yes 70818562
chr19 17221035 17221049 SPI1 JASPAR yes 112682607
chr19 17221035 17221049 SPIC JASPAR yes 112682608
chr19 17221036 17221049 ELF1 JASPAR yes 70818563
chr19 17221036 17221049 ELF1 JASPAR yes 112682609
chr19 17221037 17221049 ELF4 JASPAR yes 70818564
chr19 17221037 17221049 ELF4 JASPAR yes 112682610
chr19 17221039 17221049 GABPA JASPAR yes 70818565
chr19 17221039 17221049 GABPA JASPAR yes 112682611
chr19 17221039 17221050 FLI1 JASPAR yes 70818566
chr19 17221039 17221050 FLI1 JASPAR yes 112682612
chr19 17221040 17221048 EHF JASPAR yes 70818567
chr19 17221040 17221048 EHF JASPAR yes 112682613
chr19 17221060 17221070 TFCP2 JASPAR yes 70818568
chr19 17221060 17221070 TFCP2 JASPAR yes 112682614
chr19 17221069 17221073 H1TF2 TRANSFAC yes 70818569
chr19 17221069 17221073 NFE TRANSFAC yes 70818570
chr19 17221069 17221073 SRF TRANSFAC yes 70818571
chr19 17221069 17221073 H1TF2 TRANSFAC yes 112682615
chr19 17221069 17221073 NFE TRANSFAC yes 112682616
chr19 17221069 17221073 SRF TRANSFAC yes 112682617
chr19 17221071 17221083 NHLH1 JASPAR yes 70818572
chr19 17221071 17221083 NHLH1 JASPAR yes 112682618
chr19 17221072 17221082 TFAP4 JASPAR yes 70818573
chr19 17221072 17221082 TFAP4 JASPAR yes 112682619
chr19 17221082 17221091 THAP1 JASPAR yes 70818574
chr19 17221082 17221091 THAP1 JASPAR yes 112682620
chr19 17221094 17221106 MYBL1 JASPAR yes 70818575
chr19 17221094 17221106 MYBL1 JASPAR yes 112682621
chr19 17221099 17221102 MYB TRANSFAC yes 70818576
chr19 17221099 17221102 MYB TRANSFAC yes 112682622
chr19 17221107 17221113 YY1 JASPAR yes 70818577
chr19 17221107 17221113 YY1 JASPAR yes 112682623
chr19 17221111 17221125 RXRB JASPAR yes 70818578
chr19 17221111 17221125 RXRB JASPAR yes 112682624
chr19 17221152 17221158 MZF1 JASPAR yes 70818579
chr19 17221152 17221158 MZF1 JASPAR yes 112682625
chr19 17221166 17221181 HNF4A JASPAR yes 70818580
chr19 17221166 17221181 HNF4A JASPAR yes 112682626
chr19 17221167 17221181 NR2F1 JASPAR yes 70818581
chr19 17221167 17221181 NR2F1 JASPAR yes 112682627
chr19 17221167 17221182 HNF4G JASPAR yes 70818582
chr19 17221167 17221182 HNF4G JASPAR yes 112682628
chr19 17221199 17221214 TFAP2A JASPAR yes 70818583
chr19 17221199 17221214 TFAP2A JASPAR yes 112682629
chr19 17221202 17221214 TFAP2C JASPAR yes 70818584
chr19 17221202 17221214 TFAP2C JASPAR yes 112682630
chr19 17221202 17221217 TFAP2A JASPAR yes 70818585
chr19 17221202 17221217 TFAP2C JASPAR yes 70818586
chr19 17221202 17221217 TFAP2A JASPAR yes 112682631
chr19 17221202 17221217 TFAP2C JASPAR yes 112682632
chr19 17221214 17221220 ZNF354C JASPAR yes 70818587
chr19 17221214 17221220 ZNF354C JASPAR yes 112682633
chr19 17221216 17221221 GATA2 JASPAR yes 70818588
chr19 17221216 17221221 GATA2 JASPAR yes 112682634
SNP sites on vista28858[chr19:17220741-17221250]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28858[chr19:17220741-17221250]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 17003758 17137625 - CPAMD8 ENSG00000160111.8 17137625 0.91 0.99 17200 16884
chr19 17160539 17186435 - HAUS8 ENSG00000131351.10 17186435 0.87 0.99 17201 65694
chr19 17186591 17325346 + MYO9B ENSG00000099331.9 17186591 0.75 1.0 17202 65850
Expression level of Genes
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miRNAs possibly regulated by vista28858[chr19:17220741-17221250]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results