EnhancerDB
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  3. vista28859[chr19:17224246-17224646]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28859[chr19:17224246-17224646]
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Tissue distribution of vista28859
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Transcription factor that possibly regulate vista28859[chr19:17224246-17224646]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 17224238 17224249 NFKB1 JASPAR yes 70818589
chr19 17224238 17224249 NFKB1 JASPAR yes 112683069
chr19 17224238 17224251 NFKB2 JASPAR yes 70818590
chr19 17224238 17224251 NFKB2 JASPAR yes 112683070
chr19 17224239 17224249 NFKB1 JASPAR yes 70818591
chr19 17224239 17224249 NFKB1 JASPAR yes 112683071
chr19 17224268 17224272 ESR1 TRANSFAC yes 70818592
chr19 17224268 17224272 ESR1 TRANSFAC yes 112683072
chr19 17224270 17224289 REST JASPAR yes 70818593
chr19 17224270 17224289 REST JASPAR yes 112683073
chr19 17224291 17224297 YY1 JASPAR yes 70818594
chr19 17224291 17224297 YY1 JASPAR yes 112683074
chr19 17224303 17224311 FOXO3 JASPAR yes 70818595
chr19 17224303 17224311 FOXO3 JASPAR yes 112683075
chr19 17224321 17224326 GATA2 JASPAR yes 70818596
chr19 17224321 17224326 GATA2 JASPAR yes 112683076
chr19 17224322 17224328 ZNF354C JASPAR yes 70818597
chr19 17224322 17224328 ZNF354C JASPAR yes 112683077
chr19 17224326 17224338 FOXI1 JASPAR yes 70818598
chr19 17224326 17224338 FOXI1 JASPAR yes 112683078
chr19 17224331 17224345 RORA JASPAR yes 70818599
chr19 17224331 17224345 RORA JASPAR yes 112683079
chr19 17224334 17224344 RORA JASPAR yes 70818600
chr19 17224334 17224344 RORA JASPAR yes 112683080
chr19 17224339 17224343 ESR1 TRANSFAC yes 70818601
chr19 17224339 17224343 ESR1 TRANSFAC yes 112683081
chr19 17224347 17224353 ZNF354C JASPAR yes 70818602
chr19 17224347 17224353 ZNF354C JASPAR yes 112683082
chr19 17224365 17224378 SMAD2 JASPAR yes 70818603
chr19 17224365 17224378 SMAD2 JASPAR yes 112683083
chr19 17224378 17224389 CEBPA JASPAR yes 70818604
chr19 17224378 17224389 CEBPA JASPAR yes 112683084
chr19 17224378 17224399 ZNF263 JASPAR yes 70818605
chr19 17224378 17224399 ZNF263 JASPAR yes 112683085
chr19 17224381 17224402 ZNF263 JASPAR yes 70818606
chr19 17224381 17224402 ZNF263 JASPAR yes 112683086
chr19 17224387 17224406 CTCF JASPAR yes 70818607
chr19 17224387 17224406 CTCF JASPAR yes 112683087
chr19 17224393 17224414 ZNF263 JASPAR yes 70818608
chr19 17224393 17224414 ZNF263 JASPAR yes 112683088
chr19 17224401 17224416 AR JASPAR yes 70818609
chr19 17224401 17224416 AR JASPAR yes 112683089
chr19 17224401 17224418 NR3C1 JASPAR yes 70818610
chr19 17224401 17224418 NR3C2 JASPAR yes 70818611
chr19 17224401 17224418 NR3C1 JASPAR yes 112683090
chr19 17224401 17224418 NR3C2 JASPAR yes 112683091
chr19 17224401 17224419 ESR2 JASPAR yes 70818612
chr19 17224401 17224419 ESR2 JASPAR yes 112683092
chr19 17224403 17224423 ESR1 JASPAR yes 70818613
chr19 17224403 17224423 ESR1 JASPAR yes 112683093
chr19 17224417 17224426 RUNX2 JASPAR yes 70818614
chr19 17224417 17224426 RUNX2 JASPAR yes 112683094
chr19 17224417 17224427 RUNX3 JASPAR yes 70818615
chr19 17224417 17224427 RUNX3 JASPAR yes 112683095
chr19 17224435 17224439 H4TF2 TRANSFAC yes 70818616
chr19 17224435 17224439 H4TF2 TRANSFAC yes 112683096
chr19 17224436 17224451 TFAP2C JASPAR yes 70818617
chr19 17224436 17224451 TFAP2C JASPAR yes 112683097
chr19 17224437 17224452 ZIC3 JASPAR yes 70818618
chr19 17224437 17224452 ZIC3 JASPAR yes 112683098
chr19 17224438 17224452 GLIS2 JASPAR yes 70818619
chr19 17224438 17224452 GLIS3 JASPAR yes 70818620
chr19 17224438 17224452 GLIS2 JASPAR yes 112683099
chr19 17224438 17224452 GLIS3 JASPAR yes 112683100
chr19 17224442 17224452 ZNF740 JASPAR yes 70818621
chr19 17224442 17224452 ZNF740 JASPAR yes 112683101
chr19 17224453 17224462 HIC2 JASPAR yes 70818622
chr19 17224453 17224462 HIC2 JASPAR yes 112683102
chr19 17224456 17224460 LFA1 TRANSFAC yes 70818623
chr19 17224456 17224460 LFA1 TRANSFAC yes 112683103
chr19 17224465 17224469 LFA1 TRANSFAC yes 70818624
chr19 17224465 17224469 LFA1 TRANSFAC yes 112683104
chr19 17224469 17224482 ELF1 JASPAR yes 70818625
chr19 17224469 17224482 ELF1 JASPAR yes 112683105
chr19 17224472 17224482 ERF JASPAR yes 70818626
chr19 17224472 17224482 ERG JASPAR yes 70818627
chr19 17224472 17224482 ETS1 JASPAR yes 70818628
chr19 17224472 17224482 FLI1 JASPAR yes 70818629
chr19 17224472 17224482 GABPA JASPAR yes 70818630
chr19 17224472 17224482 ERF JASPAR yes 112683106
chr19 17224472 17224482 ERG JASPAR yes 112683107
chr19 17224472 17224482 ETS1 JASPAR yes 112683108
chr19 17224472 17224482 FLI1 JASPAR yes 112683109
chr19 17224472 17224482 GABPA JASPAR yes 112683110
chr19 17224472 17224483 ELK4 JASPAR yes 70818631
chr19 17224472 17224483 FLI1 JASPAR yes 70818632
chr19 17224472 17224483 ELK4 JASPAR yes 112683111
chr19 17224472 17224483 FLI1 JASPAR yes 112683112
chr19 17224483 17224489 GATA3 JASPAR yes 70818633
chr19 17224483 17224489 GATA3 JASPAR yes 112683113
chr19 17224526 17224540 MTF1 JASPAR yes 70818634
chr19 17224526 17224540 MTF1 JASPAR yes 112683114
chr19 17224526 17224541 FOXA1 JASPAR yes 70818635
chr19 17224526 17224541 FOXA1 JASPAR yes 112683115
chr19 17224529 17224540 FOXC1 JASPAR yes 70818636
chr19 17224529 17224540 FOXC1 JASPAR yes 112683116
chr19 17224530 17224541 FOXA1 JASPAR yes 70818637
chr19 17224530 17224541 FOXA1 JASPAR yes 112683117
chr19 17224537 17224543 SOX10 JASPAR yes 70818638
chr19 17224537 17224543 SOX10 JASPAR yes 112683118
chr19 17224543 17224553 MZF1 JASPAR yes 70818639
chr19 17224543 17224553 MZF1 JASPAR yes 112683119
chr19 17224548 17224553 ETS2 TRANSFAC yes 70818640
chr19 17224548 17224553 ETS2 TRANSFAC yes 112683120
chr19 17224563 17224568 SP1 TRANSFAC yes 70818641
chr19 17224563 17224568 SP1 TRANSFAC yes 112683121
chr19 17224592 17224613 ZNF263 JASPAR yes 70818642
chr19 17224592 17224613 ZNF263 JASPAR yes 112683122
chr19 17224597 17224603 GATA3 JASPAR yes 70818643
chr19 17224597 17224603 GATA3 JASPAR yes 112683123
chr19 17224608 17224613 SP1 TRANSFAC yes 70818644
chr19 17224608 17224613 SP1 TRANSFAC yes 112683124
chr19 17224622 17224626 LFA1 TRANSFAC yes 70818645
chr19 17224622 17224626 LFA1 TRANSFAC yes 112683125
chr19 17224631 17224641 SP1 JASPAR yes 70818646
chr19 17224631 17224641 SP1 JASPAR yes 112683126
chr19 17224638 17224642 LFA1 TRANSFAC yes 70818647
chr19 17224638 17224642 LFA1 TRANSFAC yes 112683127
chr19 17224643 17224647 LFA1 TRANSFAC yes 70818648
chr19 17224643 17224647 LFA1 TRANSFAC yes 112683128
SNP sites on vista28859[chr19:17224246-17224646]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28859[chr19:17224246-17224646]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 17003758 17137625 - CPAMD8 ENSG00000160111.8 17137625 0.91 0.99 17200 13379
chr19 17160539 17186435 - HAUS8 ENSG00000131351.10 17186435 0.87 0.99 17201 62189
chr19 17186591 17325346 + MYO9B ENSG00000099331.9 17186591 0.75 1.0 17202 62345
Expression level of Genes
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miRNAs possibly regulated by vista28859[chr19:17224246-17224646]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results