EnhancerDB
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  3. vista28866[chr19:17371801-17372164]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28866[chr19:17371801-17372164]
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Tissue distribution of vista28866
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Transcription factor that possibly regulate vista28866[chr19:17371801-17372164]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 17371617 17372032 CTCF UCSC Txn Factor no Conserved 108395319
chr19 17371699 17371979 RAD21 UCSC Txn Factor no Conserved 108395343
chr19 17371710 17371993 SMC3 UCSC Txn Factor no Conserved 108395351
chr19 17371762 17371997 TFAP2C UCSC Txn Factor no Conserved 108395379
chr19 17371815 17371832 BCL6B JASPAR yes 70819182
chr19 17371828 17371843 NR2C2 JASPAR yes 70819183
chr19 17371828 17371849 ZNF263 JASPAR yes 70819184
chr19 17371835 17371850 NR2C2 JASPAR yes 70819185
chr19 17371841 17371860 CTCF JASPAR yes 70819186
chr19 17371845 17371859 PLAG1 JASPAR yes 70819187
chr19 17371862 17371874 NHLH1 JASPAR yes 70819188
chr19 17371863 17371873 FIGLA JASPAR yes 70819189
chr19 17371863 17371873 ID4 JASPAR yes 70819190
chr19 17371863 17371873 NHLH1 JASPAR yes 70819191
chr19 17371863 17371873 TCF3 JASPAR yes 70819192
chr19 17371863 17371873 TCF4 JASPAR yes 70819193
chr19 17371864 17371873 SNAI2 JASPAR yes 70819194
chr19 17371865 17371870 USF2 TRANSFAC yes 70819195
chr19 17371875 17371886 NRF1 JASPAR yes 70819196
chr19 17371882 17371888 SP1 TRANSFAC yes 70819197
chr19 17371882 17371892 SP1 JASPAR yes 70819198
chr19 17371897 17371912 TFAP2C JASPAR yes 70819199
chr19 17371899 17371912 TFAP2A JASPAR yes 70819200
chr19 17371899 17371912 TFAP2B JASPAR yes 70819201
chr19 17371899 17371912 TFAP2C JASPAR yes 70819202
chr19 17371900 17371911 EBF1 JASPAR yes 70819203
chr19 17371906 17371919 SMAD2 JASPAR yes 70819204
chr19 17371917 17371926 PITX3 JASPAR yes 70819205
chr19 17371918 17371926 RHOXF1 JASPAR yes 70819206
chr19 17371975 17371979 YY1 TRANSFAC yes 70819207
chr19 17371991 17372010 REST JASPAR yes 70819208
chr19 17372004 17372010 MZF1 JASPAR yes 70819209
chr19 17372009 17372024 PRDM1 JASPAR yes 70819210
chr19 17372015 17372029 PLAG1 JASPAR yes 70819211
chr19 17372111 17372126 STAT2 JASPAR yes 70819212
chr19 17372112 17372126 STAT1 JASPAR yes 70819213
chr19 17372114 17372135 IRF1 JASPAR yes 70819214
chr19 17372116 17372131 PRDM1 JASPAR yes 70819215
chr19 17372116 17372131 STAT2 JASPAR yes 70819216
chr19 17372116 17372137 ZNF263 JASPAR yes 70819217
chr19 17372117 17372131 SPIC JASPAR yes 70819218
chr19 17372117 17372131 STAT1 JASPAR yes 70819219
chr19 17372118 17372132 IRF7 JASPAR yes 70819220
chr19 17372118 17372132 IRF8 JASPAR yes 70819221
chr19 17372118 17372133 IRF9 JASPAR yes 70819222
chr19 17372118 17372139 IRF1 JASPAR yes 70819223
chr19 17372119 17372134 FOXP1 JASPAR yes 70819224
chr19 17372120 17372135 PRDM1 JASPAR yes 70819225
chr19 17372120 17372135 STAT2 JASPAR yes 70819226
chr19 17372120 17372141 IRF1 JASPAR yes 70819227
chr19 17372124 17372145 IRF1 JASPAR yes 70819228
chr19 17372124 17372145 ZNF263 JASPAR yes 70819229
chr19 17372125 17372146 ZNF263 JASPAR yes 70819230
chr19 17372128 17372149 IRF1 JASPAR yes 70819231
chr19 17372128 17372149 ZNF263 JASPAR yes 70819232
chr19 17372130 17372151 IRF1 JASPAR yes 70819233
chr19 17372132 17372153 IRF1 JASPAR yes 70819234
chr19 17372136 17372157 IRF1 JASPAR yes 70819235
chr19 17372138 17372153 PRDM1 JASPAR yes 70819236
chr19 17372138 17372153 STAT2 JASPAR yes 70819237
chr19 17372139 17372153 SPIC JASPAR yes 70819238
chr19 17372139 17372153 STAT1 JASPAR yes 70819239
chr19 17372140 17372161 IRF1 JASPAR yes 70819240
chr19 17372141 17372156 FOXP1 JASPAR yes 70819241
chr19 17372141 17372162 IRF1 JASPAR yes 70819242
chr19 17372142 17372163 IRF1 JASPAR yes 70819243
chr19 17372143 17372158 FOXP1 JASPAR yes 70819244
chr19 17372145 17372160 FOXP1 JASPAR yes 70819245
chr19 17372146 17372161 FOXP1 JASPAR yes 70819246
chr19 17372147 17372162 FOXP1 JASPAR yes 70819247
chr19 17372148 17372163 FOXP1 JASPAR yes 70819248
chr19 17372149 17372164 FOXP1 JASPAR yes 70819249
SNP sites on vista28866[chr19:17371801-17372164]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28866[chr19:17371801-17372164]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 17326155 17330638 + USE1 ENSG00000053501.8 17326155 0.55 0.99 17203 54354
chr19 17337013 17340028 + OCEL1 ENSG00000099330.4 17337013 0.68 1.0 17204 65212
chr19 17342692 17356749 - NR2F6 ENSG00000160113.5 17356749 0.64 1.0 17205 84948
chr19 17346749 17366257 - AC010646.3 ENSG00000269095.1 17366257 0.97 0.95 17206 94456
chr19 17359985 17393595 - USHBP1 ENSG00000130307.7 17393595 0.78 1.0 17207 78569
chr19 17378159 17392058 + BABAM1 ENSG00000105393.11 17378159 0.57 0.99 17208 94005
chr19 17378227 17393775 + CTD-2278I10.6 ENSG00000269307.1 17378227 0.91 0.93 17209 93937
chr19 17392454 17398455 + ANKLE1 ENSG00000160117.10 17392454 0.91 1.0 17210 79710
chr19 17402940 17421045 - ABHD8 ENSG00000127220.5 17421045 0.58 0.99 17211 51119
chr19 17403418 17417652 + MRPL34 ENSG00000130312.2 17403418 0.76 0.99 17212 68746
chr19 17420327 17434110 + DDA1 ENSG00000130311.6 17420327 0.71 1.0 17213 51837
chr19 17434032 17445638 - ANO8 ENSG00000074855.6 17445638 0.62 1.0 17214 26526
chr19 17445729 17453544 + GTPBP3 ENSG00000130299.12 17445729 0.59 1.0 17215 26435
Expression level of Genes
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miRNAs possibly regulated by vista28866[chr19:17371801-17372164]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results