EnhancerDB
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  3. vista28867[chr19:17570047-17570102]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28867[chr19:17570047-17570102]
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Tissue distribution of vista28867
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Transcription factor that possibly regulate vista28867[chr19:17570047-17570102]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 17570069 17570086 RXRA JASPAR yes 70819250
chr19 17570078 17570096 NR3C1 JASPAR yes 70819251
chr19 17570081 17570091 TFCP2 JASPAR yes 70819252
chr19 17570081 17570096 AR JASPAR yes 70819253
SNP sites on vista28867[chr19:17570047-17570102]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28867[chr19:17570047-17570102]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 17462257 17488159 - PLVAP ENSG00000130300.4 17488159 0.92 0.97 17216 18112
chr19 17513748 17516457 - BST2 ENSG00000130303.8 17516457 0.92 0.94 17217 46410
chr19 17516531 17544533 + MVB12A ENSG00000141971.8 17516531 0.65 1.0 17218 46484
chr19 17546318 17559376 - TMEM221 ENSG00000188051.6 17559376 0.95 1.0 17219 89329
chr19 17547420 17571613 - CTD-2521M24.10 ENSG00000269035.1 17571613 0.0 1.0 17220 98489
chr19 17566234 17571763 - NXNL1 ENSG00000171773.2 17571763 0.88 0.83 17221 98339
chr19 17579578 17616977 + SLC27A1 ENSG00000130304.12 17579578 0.77 1.0 17222 90524
chr19 17622438 17632097 + PGLS ENSG00000130313.2 17622438 0.55 0.99 17223 47664
chr19 17634110 17664648 + FAM129C ENSG00000167483.13 17634110 0.98 0.99 17224 35992
chr19 17666403 17693971 + COLGALT1 ENSG00000130309.6 17666403 0.71 1.0 17225 3699
Expression level of Genes
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miRNAs possibly regulated by vista28867[chr19:17570047-17570102]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results