EnhancerDB
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  3. vista28869[chr19:17604234-17604409]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28869[chr19:17604234-17604409]
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Tissue distribution of vista28869
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Transcription factor that possibly regulate vista28869[chr19:17604234-17604409]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 17604234 17604249 FOXP1 JASPAR yes 70819330
chr19 17604235 17604250 FOXP1 JASPAR yes 70819331
chr19 17604235 17604256 IRF1 JASPAR yes 70819332
chr19 17604236 17604251 FOXP1 JASPAR yes 70819333
chr19 17604236 17604257 IRF1 JASPAR yes 70819334
chr19 17604237 17604252 FOXP1 JASPAR yes 70819335
chr19 17604237 17604258 IRF1 JASPAR yes 70819336
chr19 17604238 17604253 FOXP1 JASPAR yes 70819337
chr19 17604238 17604259 IRF1 JASPAR yes 70819338
chr19 17604239 17604254 FOXP1 JASPAR yes 70819339
chr19 17604239 17604260 IRF1 JASPAR yes 70819340
chr19 17604240 17604255 FOXP1 JASPAR yes 70819341
chr19 17604240 17604261 IRF1 JASPAR yes 70819342
chr19 17604241 17604256 FOXP1 JASPAR yes 70819343
chr19 17604241 17604262 IRF1 JASPAR yes 70819344
chr19 17604242 17604257 FOXP1 JASPAR yes 70819345
chr19 17604242 17604263 IRF1 JASPAR yes 70819346
chr19 17604243 17604258 FOXP1 JASPAR yes 70819347
chr19 17604243 17604264 IRF1 JASPAR yes 70819348
chr19 17604244 17604259 FOXP1 JASPAR yes 70819349
chr19 17604246 17604261 FOXP1 JASPAR yes 70819350
chr19 17604248 17604263 FOXP1 JASPAR yes 70819351
chr19 17604251 17604262 FOXP2 JASPAR yes 70819352
chr19 17604297 17604312 FOXP1 JASPAR yes 70819353
chr19 17604297 17604318 IRF1 JASPAR yes 70819354
chr19 17604300 17604311 FOXP2 JASPAR yes 70819355
chr19 17604317 17604321 YY1 TRANSFAC yes 70819356
chr19 17604321 17604325 YY1 TRANSFAC yes 70819357
chr19 17604342 17604353 EBF1 JASPAR yes 70819358
chr19 17604363 17604377 GATA2 JASPAR yes 70819359
chr19 17604365 17604369 YY1 TRANSFAC yes 70819360
chr19 17604367 17604375 GATA3 JASPAR yes 70819361
chr19 17604379 17604395 SOX4 JASPAR yes 70819362
chr19 17604382 17604387 MYC TRANSFAC yes 70819363
chr19 17604389 17604399 SMAD3 JASPAR yes 70819364
SNP sites on vista28869[chr19:17604234-17604409]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28869[chr19:17604234-17604409]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 17513748 17516457 - BST2 ENSG00000130303.8 17516457 0.92 0.94 17217 12223
chr19 17516531 17544533 + MVB12A ENSG00000141971.8 17516531 0.65 1.0 17218 12297
chr19 17546318 17559376 - TMEM221 ENSG00000188051.6 17559376 0.95 1.0 17219 55142
chr19 17547420 17571613 - CTD-2521M24.10 ENSG00000269035.1 17571613 0.0 1.0 17220 67379
chr19 17566234 17571763 - NXNL1 ENSG00000171773.2 17571763 0.88 0.83 17221 67529
chr19 17579578 17616977 + SLC27A1 ENSG00000130304.12 17579578 0.77 1.0 17222 75344
chr19 17622438 17632097 + PGLS ENSG00000130313.2 17622438 0.55 0.99 17223 81971
chr19 17634110 17664648 + FAM129C ENSG00000167483.13 17634110 0.98 0.99 17224 70299
chr19 17666403 17693971 + COLGALT1 ENSG00000130309.6 17666403 0.71 1.0 17225 38006
Expression level of Genes
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miRNAs possibly regulated by vista28869[chr19:17604234-17604409]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results